Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam07g0799 ATGGATGGTGACATAATGAATCCACAAGGTCATCATATGGGAGCTTCTTCATTGATTAATAATTGTGAAATTGATTGGGATGGGCTTTTTTCTGGATCATCTTGTTTGAGTAATATAGAGATGGAGAAGGGAATTTGTGGAAGTGAGGATCAGGTTATTGCAGCAATGGGAGATTATGATAATGTTGTGAATATTGGAGGAATAAAAGAGGGTGATATTGGTGGAGGGAAGAATAATTGTAATAAAGGGAAAATGGTGATGGGTAAAAGAAGAAGTGCAATGGCTCCAAGGATTGCTTTTCAGACAAGGAGTGCTGAGGATGTTCTTGATGATGGCTATAGATGGAGGAAATATGGTCAGAAGGCAGTCAAACATAGCAATCATCCTAGGAGCTATTACCGGTGTACACATCACACATGCAACGTTAAGAAACAAATTCAAAGGCACGCCAAGGATCCGACCATAGTGGTGACAACATATGAAGGGATTCACAACCATCCATCTGAGAAATTAATGGAGACTCTAAGCCCTCTTCTTAAGCAATTGCAGTTCCTTTCTGGCATTTAG 567 39.86 MDGDIMNPQGHHMGASSLINNCEIDWDGLFSGSSCLSNIEMEKGICGSEDQVIAAMGDYDNVVNIGGIKEGDIGGGKNNCNKGKMVMGKRRSAMAPRIAFQTRSAEDVLDDGYRWRKYGQKAVKHSNHPRSYYRCTHHTCNVKKQIQRHAKDPTIVVTTYEGIHNHPSEKLMETLSPLLKQLQFLSGI 188
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 20042763 20044985 - CaPI482276_07g007990.1 Cam07g0799 131092
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam07g0799 188 FunFam WRKY transcription factor 57 95 169 - -
Cam07g0799 188 Gene3D WRKY domain 94 168 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cam07g0799 188 SUPERFAMILY WRKY DNA-binding domain 102 168 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cam07g0799 188 Pfam WRKY DNA -binding domain 110 167 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cam07g0799 188 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 81 167 IPR044810 GO:0003700(InterPro)
Cam07g0799 188 SMART WRKY_cls 109 168 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cam07g0799 188 ProSiteProfiles WRKY domain profile. 104 169 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam07g0799 Cam-Chr7:20042763 Cam09g0494 Cam-Chr9:5096396 9.40E-25 dispersed
Cam07g0799 Cam-Chr7:20042763 Cam07g0800 Cam-Chr7:20106383 1.80E-12 tandem
Cam05g1512 Cam-Chr5:19018391 Cam07g0799 Cam-Chr7:20042763 5.10E-30 transposed
Cam07g1566 Cam-Chr7:30354969 Cam07g0799 Cam-Chr7:20042763 4.50E-30 transposed
Cam11g0745 Cam-Chr11:9273109 Cam07g0799 Cam-Chr7:20042763 3.20E-26 transposed
Cam05g0151 Cam-Chr5:1675451 Cam07g0799 Cam-Chr7:20042763 5.40E-38 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
52268 PF03106 WRKY 8.30E-25 CL0274 Cam TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam07g0799 - - - 0.0