Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam07g0833 ATGGATGACTTTGGTTCATCTTCTAGATTTCATCATCATCAGTACTACAACTTTGAGAGCAGCAGCAGCAGCAACAACAACAATAACAACAGAAGAAGCAGAGATTTTGATGATGATGAACAACAACAACAACAAGATCAAGAAATGGAAGAATGTTGTAACAACAACAACAACAATAATAATTGTTGTGTTTTTGTAGAGAAAGAGCACATGTTTGACAAGGTTGTAACTCCAAGCGATGTGGGAAAATTAAACCGTTTAGTTATCCCAAAACAACACGCTGAAAAATACTTCCCACTTGATTCTTCATCCAACGAAAAAGGTCTTCTCTTAAACTTTGAAGACCGCTGTGGTAAGCTTTGGCGCTTCCGTTACTCTTACTGGACCAGCAGCCAAAGCTATGTGATGACCAAAGGCTGGAGCCGCTTTGTCAAAGACAAAAGACTCGATGCTGGTGATATTGTCTCTTTTCAAAGACCTCTACATCATGCTAAAGATCGTTTTTTTATCGATTGGCGACGCCGTCCACCGCATCCCACCGTCGACATGCCTTTTCCTTTCAACCGCGGTGGCCAATTTCCTCCTCATCACCATTTTCAGCTTCACGGCCAGTGGAATAATAATCCAGTGGCCACACCCTTATCTTTACACAGGGACCACGTCCTCCACTTGCCGCACAATAATAATGTCAGTTTATTTCATAATACCTATAATCATCATCATCATAATCATAATCGTCATCCTGTTCTTGACGGCTCGTCCTACGGTGGGGCATCGGCTTTTTACCATTTGAGATCCCCCTCCACAGCGCCGCAGATAGAGGCAGTGCCGGTTGTAGCAGATGGAAAGGGTGGTGGTAGCAGTGGTGGTGGTGGGAAAACGGCTGCGGCTAAGACGACATTAAGGCTTTTTGGTGTCAACATGGAATGTGCAGTATCTGAAGAGTCTGGTGATGATGAGTGTGACATAGGAACAACTTCGACGACAACAATGTTGTCGTCGTCTCAATTCCATGTTTATAATGGGATGCCGATGCCGATGCCGATGCTGATGCCGATGCCGATGCAGATGCCAATAAATAATAACAACGTATCAACCATGGAGTTCTTCGAGAAAGGGAAGTCATCGATGTCGTCGTCCTTTGATTTTGATACTTGA 1158 43.96 MDDFGSSSRFHHHQYYNFESSSSSNNNNNNRRSRDFDDDEQQQQQDQEMEECCNNNNNNNNCCVFVEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSSNEKGLLLNFEDRCGKLWRFRYSYWTSSQSYVMTKGWSRFVKDKRLDAGDIVSFQRPLHHAKDRFFIDWRRRPPHPTVDMPFPFNRGGQFPPHHHFQLHGQWNNNPVATPLSLHRDHVLHLPHNNNVSLFHNTYNHHHHNHNRHPVLDGSSYGGASAFYHLRSPSTAPQIEAVPVVADGKGGGSSGGGGKTAAAKTTLRLFGVNMECAVSEESGDDECDIGTTSTTTMLSSSQFHVYNGMPMPMPMLMPMPMQMPINNNNVSTMEFFEKGKSSMSSSFDFDT 385
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 20827098 20828255 - CaPI482276_07g008330.1 Cam07g0833 131126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam07g0833 385 ProSiteProfiles B3 DNA-binding domain profile. 72 176 IPR003340 GO:0003677(InterPro)
Cam07g0833 385 MobiDBLite consensus disorder prediction 15 30 - -
Cam07g0833 385 MobiDBLite consensus disorder prediction 15 52 - -
Cam07g0833 385 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 23 308 IPR044800 GO:0003700(InterPro)
Cam07g0833 385 Gene3D - 65 180 IPR015300 -
Cam07g0833 385 Pfam B3 DNA binding domain 72 175 IPR003340 GO:0003677(InterPro)
Cam07g0833 385 SUPERFAMILY DNA-binding pseudobarrel domain 69 174 IPR015300 -
Cam07g0833 385 CDD B3_DNA 70 159 IPR003340 GO:0003677(InterPro)
Cam07g0833 385 FunFam B3 domain-containing protein 65 184 - -
Cam07g0833 385 SMART B3_2 72 176 IPR003340 GO:0003677(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam06g0239 Cam-Chr6:4189233 Cam07g0833 Cam-Chr7:20827098 1.50E-52 dispersed
Cam07g0833 Cam-Chr7:20827098 Cam08g1201 Cam-Chr8:18321638 2.30E-09 dispersed
Cam10g1832 Cam-Chr10:32433294 Cam07g0833 Cam-Chr7:20827098 1.30E-38 transposed
Cam01g0127 Cam-Chr1:1580753 Cam07g0833 Cam-Chr7:20827098 1.70E-51 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
52271 PF02362 B3 1.40E-27 CL0405 Cam TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam07g0833 K09287 - csv:101220139 494.967