Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam07g0892 ATGACTTTCCCTTTCTCAATCCCAAAGAGTTGCGGCGACAAGAACATGGCTACGTTCGTGGAGCCACCGAACGGATTCAGATCAATGGGGAAGCATTATTACACAATGTGGCAAACTCTCTTTGAAATTGATACTAAATATATTCCAATCAAGCCAATTGGGCGAGGAGCTTATGGTGTGGTGTGTTCTTCGATTAACCGAGAGACCAACGAGAAAGTGGCGATCAAGAAGATTCATAATGTGTTTGAGAATCGCACGGACGCCATGAGAACACTGAGGGAGCTGATGCTTCTGAGGCATATAAGGCATGAGAATGTGATTGCTTTGAAGGATGTGATGATGCCAATCCACAGAAAAAGCTTTAAGGATGTTTATTTGGTTTATGAACTCATGGATACGGATCTTCATCAGATTATCAAGTCCCCTCAGCCACTTTCCAATGATCATTGCAAGTACTTTATCTATCAGTTGCTCTGCGGGTTGCAGTATCTTCATTCGGCAAACATTCTTCACCGGGACTTGAAGCCCGGGAACCTCCTTGTCAATGCTAACTGCGATCTAAAGATATGCGATTTCGGGTTGGCACGAACTAGCATGGGCCGTGACCAGTTCATGACTGAGTATGTTGTTACTCGCTGGTATCGCGCTCCAGAGCTTCTCCTCTGCTGTGACAACTATGGAACTTCCATTGATGTATGGTCTGTGGGATGCATCTTTGCTGAGATTCTAGGTCGCCAACCTATTTTCCCTGGGACGGAATGCCTCAACCAACTTAACTTAATCATCAATATTCTTGGTAGTCCAAAGGAAGCAGATATCGAGTTCATTGCCAATGGAAAGGCCAGAAATTATATCAAGGCAATGCCCTTCTCGAGAGGAATACGCCTTTCGCATCTATATCCACACGCTGAACCTTTAGCTTTAGATTTGTTACAGAAGATGCTTGTGTTTGATCCAACTAAGAGAATTACTGTTGACGAAGCACTTCAACATCCATACATGTCAGGGCTATACGACCCGAGATTCAACCCTCCTGTTGAGGTTCCCCTCACTCTTGACATTGACGACTCACTTACGGAGCCTAAGATCAGGGAAATGATGTTGAACGAGATGCTGTATTACCATCCGGAAGCTGTTTCAGGATATTATTGA 1152 44.36 MTFPFSIPKSCGDKNMATFVEPPNGFRSMGKHYYTMWQTLFEIDTKYIPIKPIGRGAYGVVCSSINRETNEKVAIKKIHNVFENRTDAMRTLRELMLLRHIRHENVIALKDVMMPIHRKSFKDVYLVYELMDTDLHQIIKSPQPLSNDHCKYFIYQLLCGLQYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSMGRDQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEILGRQPIFPGTECLNQLNLIINILGSPKEADIEFIANGKARNYIKAMPFSRGIRLSHLYPHAEPLALDLLQKMLVFDPTKRITVDEALQHPYMSGLYDPRFNPPVEVPLTLDIDDSLTEPKIREMMLNEMLYYHPEAVSGYY 383
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 22003091 22005416 + CaPI482276_07g008920.1 Cam07g0892 131185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam07g0892 383 FunFam Mitogen-activated protein kinase 33 140 - -
Cam07g0892 383 ProSitePatterns Protein kinases ATP-binding region signature. 53 77 IPR017441 GO:0005524(InterPro)
Cam07g0892 383 FunFam Mitogen-activated protein kinase 131 360 - -
Cam07g0892 383 Pfam Protein kinase domain 50 334 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam07g0892 383 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 41 372 IPR050117 GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0035556(PANTHER)
Cam07g0892 383 SUPERFAMILY Protein kinase-like (PK-like) 39 341 IPR011009 -
Cam07g0892 383 ProSitePatterns Serine/Threonine protein kinases active-site signature. 169 181 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam07g0892 383 ProSiteProfiles Protein kinase domain profile. 47 334 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam07g0892 383 ProSitePatterns MAP kinase signature. 82 185 IPR003527 GO:0004707(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam07g0892 383 Gene3D Phosphorylase Kinase; domain 1 34 130 - -
Cam07g0892 383 SMART serkin_6 47 334 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam07g0892 383 Gene3D Transferase(Phosphotransferase) domain 1 131 355 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam07g0892 Cam-Chr7:22003091 Cam08g1951 Cam-Chr8:25414855 7.00E-168 dispersed
Cam07g0892 Cam-Chr7:22003091 Cam01g0240 Cam-Chr1:2714680 1.50E-117 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85310 PF00069 Pkinase 3.70E-70 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam07g0892 K20537 - csv:101203896 706.057