Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam07g0908 ATGGCCGGTTTTTTCCCACTAGGCGGCGCCGGAAGCAGCGGAAGAGGTTCCAATTATCATCTTCCTACTACTACTACTAGTATCACCACCAGCGGCGGCGAAATAATTCATCCCAACGAGGGGTTATTTTGGTACAAGAATTATGAGAGGTTGGAAACGTGGGAAGAACAACAGCAACCGCAGGAACAAGGGGGAGAAGGATTTGTTTACTCGGGCGATGAATCGCCGGCTAGATCGTCGTTGGTGATGGTGAGATCGGGAAGAGGCGGCGGTGGAGGGCATGTAACGAGCTGCCAAGACTGTGGAAATCAAGCGAAAAAAGATTGCGTTCACATGCGATGTAGAACTTGTTGTAAAAGCCGTGGGTTTGAGTGTGAAACTCACGTTAAAAGCACTTGGGTTCCCGCCTCCAAACGCCGTGACCGCCACCTCCGTTGCCTCGCCTCTAACCCCAAACGCCCTAAAGACAACCCCGCTGCTTCTTCAGGGTTGGAAATGGGGAATTTTCCGGTGGAAGTAAACTCTACGGCGGTGTTTCGGTGCGTACGAATGACAACGTTGGACGAAACCAACGACCAATATGCGTATCAAACAGCTGTCAATATCGGAGGCCATATCTTCAAAGGCATTCTTTACGACCACGGCCCTGAACAACAACTACAACAACAGCCACCCACCTCCGCCTCCCCTGACGCCTCCGCCCTCCTCATCACCACCGCTGAATCCGCCGCATTGCTCGATCCACCTCCGCAGTACCCCACTCCTCTTTCCACCTACATCGCCACCGGTACGCAATTTTTTCTTCCCCCAACATCTTAA 819 52.38 MAGFFPLGGAGSSGRGSNYHLPTTTTSITTSGGEIIHPNEGLFWYKNYERLETWEEQQQPQEQGGEGFVYSGDESPARSSLVMVRSGRGGGGGHVTSCQDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLRCLASNPKRPKDNPAASSGLEMGNFPVEVNSTAVFRCVRMTTLDETNDQYAYQTAVNIGGHIFKGILYDHGPEQQLQQQPPTSASPDASALLITTAESAALLDPPPQYPTPLSTYIATGTQFFLPPTS 272
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 22294229 22295136 - CaPI482276_07g009080.1 Cam07g0908 131201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam07g0908 272 MobiDBLite consensus disorder prediction 147 167 - -
Cam07g0908 272 Pfam Domain of unknown function (DUF702) 96 217 - -
Cam07g0908 272 NCBIfam putative zinc finger domain, LRP1 type 97 139 IPR006510 -
Cam07g0908 272 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 1 266 IPR007818 GO:0003677(PANTHER)|GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0006355(InterPro)|GO:0045893(PANTHER)
Cam07g0908 272 NCBIfam LRP1 C-terminal domain 169 216 IPR006511 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam05g2038 Cam-Chr5:29063285 Cam07g0908 Cam-Chr7:22294229 5.60E-43 dispersed
Cam07g0908 Cam-Chr7:22294229 Cam09g1389 Cam-Chr9:19972497 9.40E-42 dispersed
Cam01g2041 Cam-Chr1:33548445 Cam07g0908 Cam-Chr7:22294229 5.50E-52 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
52277 PF05142 DUF702 1.20E-50 No_clan Cam TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam07g0908 K27807 - csv:101216097 385.571