Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam07g0929 ATGCCAACGGACTTAGAAAATTCCTCCAACGCTTCTGGCGAAGTCAGTATCTCCTCCACTGGCAATCAGCCTCCGCCGCCCAAATCCGCCGTGAAAAAAAAGCGTAATTTACCCGGAATGCCAGATCCGGATGCAGAGGTAATTGCTCTGTCTCCGAAGACCCTTTTGGCTACAAATCGATTTGTGTGTGAAATTTGCAACAAAGGGTTTCAAAGAGATCAGAATCTGCAACTTCACCGGCGAGGTCACAATCTTCCATGGAAACTCCGGCAACGGACTAGCAAAGAGATGAAAAAGAAAGTCTATGTCTGCCCGGAGCCGTCGTGCGTCCACCACCATCCGTCGAGAGCTCTCGGCGATCTGACCGGAATAAAGAAGCACTTCTGCCGGAAGCACGGCGAGAAGAAGTGGAAGTGCGAAAAGTGCTCTAAAAAATATGCAGTCAAGTCCGATTGGAAGGCTCATTCTAAGATTTGTGGCACCAGAGAGTACAAATGCGACTGTGAGACTGTGTTTTCGAGAAGAGATAGTTTCATCACTCACAGAGCCTTCTGTGATGCGTTGACGAAGGAGGCTGCTGGAAGTTTGTCTCCAGCGGCGGCGGAGAATCCTAATTTGGAGTCCGATCCTCATGTTCAGCCATCGGGTAGTTCGTCTCCGCCGCCTTCTGCCCCTCCTCTTTCCGCCGCGACGGGTGCCGCGCCAATAGCTCCTCCTCCATCCACTGACGCGATGTCATCAATCGCGTCCATTGAGAATAAAGCCTCACCGGAAAATCCTCCGCCGCAGCTAGGAGAGGCACCGGGCAGAACTACCCTAACTGGAAACTCCGGCAGCAGCAGCAACGCTAGCGTATTGGCTAGCTTGTTTGCTTCCTCCGCGGCATCGCTGAGCTTACAGCCGCCGCAGCCACCTGCATTTTGCGACTTATTACGAGCCATGGCGCGGCCTGATCGGGCGGCTGAAATTGCACCGCCGTTGGTTTTTGAACCTCTTTCGCTGTGCCTATCGACCGACACCGAATCGTCACTTTTTCGAGCTGGAATCCAAGAGTGCCGCCCATATGTGCCACCGACACCGCCGTCCATGTCCGCCACCGGACTCCTACAGAAGGCGGCTCAAATGGGCGCTGCAGCGGCGGGCGCATCAGTGTTTCGTGGACTTGGTTTATCGTCTTCCTCTTCTTCTGCACAACAGGGGAGTTTATAA 1209 53.68 MPTDLENSSNASGEVSISSTGNQPPPPKSAVKKKRNLPGMPDPDAEVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTSKEMKKKVYVCPEPSCVHHHPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKKYAVKSDWKAHSKICGTREYKCDCETVFSRRDSFITHRAFCDALTKEAAGSLSPAAAENPNLESDPHVQPSGSSSPPPSAPPLSAATGAAPIAPPPSTDAMSSIASIENKASPENPPPQLGEAPGRTTLTGNSGSSSNASVLASLFASSAASLSLQPPQPPAFCDLLRAMARPDRAAEIAPPLVFEPLSLCLSTDTESSLFRAGIQECRPYVPPTPPSMSATGLLQKAAQMGAAAAGASVFRGLGLSSSSSSAQQGSL 402
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 22954845 22958139 - CaPI482276_07g009290.1 Cam07g0929 131222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam07g0929 402 MobiDBLite consensus disorder prediction 1 26 - -
Cam07g0929 402 Pfam BIRD-IDD transcription factor, fourth C2HC zinc finger 163 197 - -
Cam07g0929 402 MobiDBLite consensus disorder prediction 196 279 - -
Cam07g0929 402 FunFam protein indeterminate-domain 5, chloroplastic-like 115 194 - -
Cam07g0929 402 Gene3D Classic Zinc Finger 41 108 - -
Cam07g0929 402 Pfam BIRD-IDD transcription factor, third C2HC zinc finger 136 160 - -
Cam07g0929 402 Gene3D Classic Zinc Finger 130 193 - -
Cam07g0929 402 MobiDBLite consensus disorder prediction 1 44 - -
Cam07g0929 402 ProSiteProfiles Zinc finger C2H2 type domain profile. 61 83 IPR013087 -
Cam07g0929 402 Pfam BIRD-IDD transcription factor, second C2H2 zinc finger 98 132 - -
Cam07g0929 402 ProSitePatterns Zinc finger C2H2 type domain signature. 63 83 IPR013087 -
Cam07g0929 402 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 19 391 IPR031140 GO:0003700(PANTHER)|GO:0005634(PANTHER)
Cam07g0929 402 SMART c2h2final6 61 83 IPR013087 -
Cam07g0929 402 SMART c2h2final6 137 157 IPR013087 -
Cam07g0929 402 Pfam Zinc finger, C2H2 type 61 83 IPR013087 -
Cam07g0929 402 FunFam protein indeterminate-domain 12-like 40 108 - -
Cam07g0929 402 MobiDBLite consensus disorder prediction 243 257 - -
Cam07g0929 402 SUPERFAMILY beta-beta-alpha zinc fingers 60 157 IPR036236 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam07g0929 Cam-Chr7:22954845 Cam08g1994 Cam-Chr8:25730325 1.80E-89 dispersed
Cam02g1803 Cam-Chr2:31142190 Cam07g0929 Cam-Chr7:22954845 9.30E-27 transposed
Cam01g1981 Cam-Chr1:33100665 Cam07g0929 Cam-Chr7:22954845 1.70E-129 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
52283 PF00096 zf-C2H2 0.0039 CL0361 Cam TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam07g0929 K25869 - csv:101215476 606.675