Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam07g0973 ATGTCGGTCGCTAACGCCGACACATCTCTGACTATGTCGGACGTCTCGACAGTCGAGAAAAGCAGCCCGGCGGAGAGGGCTGAGTGGGTGGCAAACCCACCAGAGCCGCCAGGGATATGGCGAGAGGTAATCGAGTCTCTCCGTGACACCATGTTTCCCGATCCGAACAAGCTTTCGTCCCTGAAGAACAAGACCGGAACTGCGGTGGTTGGAAGCCTCTTGCAGGGTGTGTTCCCTATCCTCTGCTGGGGACAGAGCTACAATCTGGGGAAGTTCAAGAATGACATCTTGGCTGGTTTGACCCTGGCTAGCCTCTGCATTCCCCAGAGTATTGGATATGCAAATCTGGCTAAACTTGATCCTCAATATGGGCTGTATACAAGCATTGTGCCACCCCTGGTTTATGCAGTGTTGGGAAGTTCGAGGGAAATAGCAATCGGACCGGTGGCCATAGTATCTCTACTTTTGCCGTCAATGATTCAGAAAATTCAAGATCCCGCCGCCGACCCTCTTGCCTACAAAAACCTTGTCTTCACCGTCACTTTCTTCGCCGGAATCTTTCAGGCCGCCTTTGGACTCTTTCGGCTGGGGTTTTTGGTGGATTTTCTGTCACATGCTGCCATAGTTGGGTTCATGGGTGGAGCTGCCATTGTAATTGGGCTTCAACAGCTCAAAGGATTGCTTGGCATCACTCACTTCACTAACAAAACTGATATTCTATCTGTTATGGAAGCTGTGTTTGGATCATTCCATCATCATAATGATCAATGGAATCCCTTCAACTTCATCATTGGCTCTTCATTCCTGTCCTTCATCCTCATCACCAAATTATTGGGGAAGAAGTACAAGAAAGTATTCTGGTTAGCTGCCATAGCTCCACTGTTGTGTGTAATCCTATCGACGCTTTTGGTGTTCCTCACAAGAGCCGACCGGCAGGGTGTGAAGATCGTCAAACGAGTTCCCGCCGGCCTGAACCCCATCTCGGCTCGCCACATCCAAATCCACTCCCCTCACTTCTCCCAAATCCTCAACGCCGCCTTCATCGTGGCCGTCATAGCCCTCACGGAGGCCATTGCTGTGGGGAGGTCACTGGCGTCCATGAAAGGTTACAACATTGATGGGAACAGAGAAATGGTTGCGTTAGGCTTCATGAACCTAGCAGGCTCTCTCACTTCTTGCTACGCAGCAACAGGTTCTCTGTCACGGTCGGCGGTTAATTTCAGTGCCGGGTGCGAGACCGCGGTTTCGAACGTGGTGATGGCGGTGACGGTGATGATATCATTGGAGATGTTCACCAAGCTCCTCTACTTCACTCCCAACGCCATTCTTGCTTCCATTATTCTATCTGCACTTCCAGGCCTCATTGATATTCACAAAGCTTATAATATCTGGAAGATCGACAAGCTCGACTTCTTGGCTTGCCTTGCAGCTTTTCTTGGTGTTCTCTTTCTCTCCGTCGAATTCGGCCTCCTCCTTTCGTTAGTGATATCATTTGCAAAGATAATAGTAATCTCAATCAAACCTGGGACTGAGATATTGGGAAAACTCCCTGGAAGTGATACCTTCTGTGATATTCATCAATATCCAATGGCTCTCAATACTCCTGGAGTCCTCATCATCCGTGTTAAATCTGGCTTACTTTGCTTTGCAAATGCCAACTTCGTCAAAGATAGGATTCTGAGGTTCATCAGCAGCCAAGATGATGCATCAGCAAAGAGAATCACTCACTTCCTAGTCATTGATCTCTCCAACTTAATGAACATTGACACTTCAGGAATTGCTTCTCTTGAAGAGCTGCAGGATAGTTTGGCAGCCAGTGGAATAGAGTTGGCCATTGCAAATCCAAAGTGGCAAGTGATTCACAAGCTAAAGGTAGCAAATTTTGTTGCCAAGCTCAAAGGGAGGGTGTTCTTGAGTGTTGGGGAAGCTGTGGATGCTTGCCTTACAGCTAAAATGGGAGCTATCTAA 1968 48.32 MSVANADTSLTMSDVSTVEKSSPAERAEWVANPPEPPGIWREVIESLRDTMFPDPNKLSSLKNKTGTAVVGSLLQGVFPILCWGQSYNLGKFKNDILAGLTLASLCIPQSIGYANLAKLDPQYGLYTSIVPPLVYAVLGSSREIAIGPVAIVSLLLPSMIQKIQDPAADPLAYKNLVFTVTFFAGIFQAAFGLFRLGFLVDFLSHAAIVGFMGGAAIVIGLQQLKGLLGITHFTNKTDILSVMEAVFGSFHHHNDQWNPFNFIIGSSFLSFILITKLLGKKYKKVFWLAAIAPLLCVILSTLLVFLTRADRQGVKIVKRVPAGLNPISARHIQIHSPHFSQILNAAFIVAVIALTEAIAVGRSLASMKGYNIDGNREMVALGFMNLAGSLTSCYAATGSLSRSAVNFSAGCETAVSNVVMAVTVMISLEMFTKLLYFTPNAILASIILSALPGLIDIHKAYNIWKIDKLDFLACLAAFLGVLFLSVEFGLLLSLVISFAKIIVISIKPGTEILGKLPGSDTFCDIHQYPMALNTPGVLIIRVKSGLLCFANANFVKDRILRFISSQDDASAKRITHFLVIDLSNLMNIDTSGIASLEELQDSLAASGIELAIANPKWQVIHKLKVANFVAKLKGRVFLSVGEAVDACLTAKMGAI 655
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 23666663 23675176 - CaPI482276_07g009730.1 Cam07g0973 131266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam07g0973 655 CDD STAS_SulP_like_sulfate_transporter 528 638 - -
Cam07g0973 655 MobiDBLite consensus disorder prediction 1 20 - -
Cam07g0973 655 ProSitePatterns SLC26A transporters signature. 121 142 IPR018045 GO:0008271(InterPro)|GO:0008272(InterPro)
Cam07g0973 655 MobiDBLite consensus disorder prediction 1 33 - -
Cam07g0973 655 NCBIfam sulfate permease 79 638 IPR001902 GO:0016020(InterPro)|GO:0055085(InterPro)
Cam07g0973 655 ProSiteProfiles STAS domain profile. 544 647 IPR002645 -
Cam07g0973 655 FunFam Sulfate transporter 31 507 650 - -
Cam07g0973 655 Gene3D STAS domain 507 650 IPR036513 -
Cam07g0973 655 Pfam Sulfate permease family 92 476 IPR011547 GO:0016020(InterPro)
Cam07g0973 655 Pfam STAS domain 528 643 IPR002645 -
Cam07g0973 655 SUPERFAMILY SpoIIaa-like 534 647 IPR036513 -
Cam07g0973 655 PANTHER SULFATE TRANSPORTER 68 648 IPR001902 GO:0005887(PANTHER)|GO:0016020(InterPro)|GO:0055085(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam07g0973 Cam-Chr7:23666663 Cam11g1556 Cam-Chr11:28362295 6.10E-180 dispersed
Cam07g0973 Cam-Chr7:23666663 Cam03g0910 Cam-Chr3:11733714 1.70E-222 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam07g0973 K17469 - csv:101213063 1113.98