Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam07g1037 ATGAAGATTCAGTGTAACGTCTGCGAGATGGCTGAGGCGACCGTTCTGTGTTGTGCTGATGAGGCGGCGCTGTGCTGGGCTTGCGACGAGAAGATTCATGCAGCCAACAAGCTCGCAAGCAAGCACCAGAGAGTTCCTCTCTCTGGCTCTTCATCTCAGATGCCTAAATGCGATATCTGCCAGGAAGCTAGTGGCTATATCTTCTGTTTAGAGGATCGAGCATTACTTTGCAGAAAGTGTGATGTTGCTATACACACAGCAAATACTTATGTAACTGGTCATCAGCGCTTTCTACTTACTGGTGTGAAAGTGGCGCTCGAGCCAACTGACCCCGTTGCTTGTTCTTCCATGGATAAGTCACATTCTCGAGAGAAGTTCACTGAGACTAAAGCTAGACCACTGTCCGAAAGGGAATTCTCGATGCCTTCTCCTGATGAACTCAGTAGAAGCTTGTCTGTACTAGGTGGATCTGAGGACTTTATGGCAAATAGAACATTGCTTACCGGAGGTGGAGATTCTGTTTCTGGTGGTTTTTCACAGTGGCAAATGGATGAACTTATTAATCTGACTGGATTCAATCAGAACTATGGGTATATGGATAACGGATCATCCAAGGCTGATAGTGGTAAGCTTGGGGATTCTGATTCATCACCAGTTTTGAGAGCTGCTGACATCGAACTGGACGATGACACTGAATGCTCGGGTCAGGTTCCGGAGGCTTCCTGGACAGTGCCTCAGATTCCCTCTCCACCCACAGCGTCAGGCTTATACTGGCCAAGAAGTTACCATAATTCTATGGATGGTGCTGTTTTTGTTCCTGACATCTCCTGTTCTTCAGAAAAGGTTCAACATTGCTCACATAATGGTACCTTCTCGAAACGAAGAAGACAGTTCTAG 897 46.71 MKIQCNVCEMAEATVLCCADEAALCWACDEKIHAANKLASKHQRVPLSGSSSQMPKCDICQEASGYIFCLEDRALLCRKCDVAIHTANTYVTGHQRFLLTGVKVALEPTDPVACSSMDKSHSREKFTETKARPLSEREFSMPSPDELSRSLSVLGGSEDFMANRTLLTGGGDSVSGGFSQWQMDELINLTGFNQNYGYMDNGSSKADSGKLGDSDSSPVLRAADIELDDDTECSGQVPEASWTVPQIPSPPTASGLYWPRSYHNSMDGAVFVPDISCSSEKVQHCSHNGTFSKRRRQF 298
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 24688659 24690861 - CaPI482276_07g010370.1 Cam07g1037 131330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam07g1037 298 CDD Bbox1_BBX-like 56 99 IPR049808 -
Cam07g1037 298 MobiDBLite consensus disorder prediction 125 148 - -
Cam07g1037 298 FunFam B-box zinc finger protein 22 1 93 - -
Cam07g1037 298 CDD Bbox1_BBX-like 5 47 IPR049808 -
Cam07g1037 298 ProSiteProfiles Zinc finger B-box type profile. 52 99 IPR000315 GO:0008270(InterPro)
Cam07g1037 298 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270(InterPro)
Cam07g1037 298 Pfam B-box zinc finger 3 47 IPR000315 GO:0008270(InterPro)
Cam07g1037 298 Pfam B-box zinc finger 53 96 IPR000315 GO:0008270(InterPro)
Cam07g1037 298 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 280 IPR051979 GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0009640(PANTHER)
Cam07g1037 298 Gene3D Classic Zinc Finger 1 92 - -
Cam07g1037 298 SMART bboxneu5 4 47 IPR000315 GO:0008270(InterPro)
Cam07g1037 298 SMART bboxneu5 52 99 IPR000315 GO:0008270(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam01g2052 Cam-Chr1:33624074 Cam07g1037 Cam-Chr7:24688659 6.30E-20 dispersed
Cam06g0132 Cam-Chr6:3281083 Cam07g1037 Cam-Chr7:24688659 2.70E-35 dispersed
Cam07g0856 Cam-Chr7:21402073 Cam07g1037 Cam-Chr7:24688659 2.20E-21 dispersed
Cam07g1037 Cam-Chr7:24688659 Cam11g0424 Cam-Chr11:5660017 1.70E-28 dispersed
Cam07g1037 Cam-Chr7:24688659 Cam08g1927 Cam-Chr8:25213136 1.10E-30 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
52296 PF00643 zf-B_box 3.60E-07 No_clan Cam TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam07g1037 - - - 0.0