Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cam07g1042 | ATGAGGGTGGGGTCACGTGAAAAAGCAGACAAAGCAAACCCAAACACCACTCGCGTCCCCATCATTATGTGCTGCTCCTTCATACACTCCAACAAAACCACAAACCCGACCCGATCCGGGGAAAAAAGGAAAAAAACCATCGTCTCTCACGTGCGCCGAACTCCGACACGTGTAGCATCTCGACAGAGACCGTTGAGAAACGCTGCTCCGCGGAACCGCCACGTGTTCAACTCTGTTTGGTTCTTCTGTCACAGACGAAAAAGAAAAAGAAAAAGAAAAACACTTTCCTCCGCCGTTCGCGGTGGTCCATCTAAGATCCGATCGCTGTCGCTGTCCAGCGCCACCGGCGAGCATCCGATTCAGATATCTCTCACTCTCAGTTCTTCTTCTTCTTCTTCTTCTTCGTTGTTTCTTAGTGTGTGTGCGTGTGTGCGTGAGTGTGTGTTGGAGATGACGTCGGGGACGAGGCTACCGACATGGAGGGAGCGGGAGAACAACAAGAGAAGAGAGAGAAGGAGAAGAGCTATTGCGGCAAAGATCTTTGCCGGACTCAGGATGTACGGGAACTACAAGCTTCCCAAGCATTGCGACAACAATGAGGTCCTTAAAGCTCTCTGCAATGAGGCGGGATGGACCGTCGAACCTGATGGTACCACTTACCGTAAGGGATGCAAGCCAATTGAACGTATGGATGTGGTTGGTGGATCGGCAGCTGCAAGCCCGTACGCATCTCACCAACCAAGTCCTTGTGCTTCCTTCAATCCAAGCCCCGGTTCATCTTCTTTTCCAAGTCCAGCATCATCCTCATATGTTGGTAATCCGAATGCTGACGGAAGTTCGCTTATACCCTGGCTCAAAAACCTTTCAACGTCATCATCTTCAGCATCCTCGTCTAAACTCCCAAATCATTATATTCATGGAGGTTCCATCAGTGCTCCGGTAACTCCTCCTCTGAGTTCCCCAACTGCTAGAACGCCCCGACTCAAAGCTGACTGGGAAGACCAATCTGTCCTACCAGGATGGAGTGCACAATACTATTCCTCCCAGCCATCTTCTACTCCACCAAGTCCTGGGCGTCAGATTCTTCCCAATCCAGAATGGTTTGCTGGCCTTAGAATTCCTCAGGGTGGACCCAATTCTCCAACATTTAGTCTTGTCTCGACAAACCCATTTGGTTTCAAGGAAGCAGCAGTGACTGGTGGAGGATCTCGCATGTGGACCCCTGGTCAAAGTGGGACCTGCTCTCCTGCCATTGCAGCAGGCTCCGATCACACTGCAGATATTCCAATGTCAGAAGTCATCTCTGATGAGTTCGCCTTTGGAAGCAATGCAGCAGGAATAGTGAAGCCATGGGAAGGAGAACGAATTCATGAAGAATGTGGTTCAGATGACCTAGAACTCACTCTTGGAAACTCAAGGACCAGGTAA | 1428 | 50.21 | MRVGSREKADKANPNTTRVPIIMCCSFIHSNKTTNPTRSGEKRKKTIVSHVRRTPTRVASRQRPLRNAAPRNRHVFNSVWFFCHRRKRKRKRKTLSSAVRGGPSKIRSLSLSSATGEHPIQISLTLSSSSSSSSSLFLSVCACVRECVLEMTSGTRLPTWRERENNKRRERRRRAIAAKIFAGLRMYGNYKLPKHCDNNEVLKALCNEAGWTVEPDGTTYRKGCKPIERMDVVGGSAAASPYASHQPSPCASFNPSPGSSSFPSPASSSYVGNPNADGSSLIPWLKNLSTSSSSASSSKLPNHYIHGGSISAPVTPPLSSPTARTPRLKADWEDQSVLPGWSAQYYSSQPSSTPPSPGRQILPNPEWFAGLRIPQGGPNSPTFSLVSTNPFGFKEAAVTGGGSRMWTPGQSGTCSPAIAAGSDHTADIPMSEVISDEFAFGSNAAGIVKPWEGERIHEECGSDDLELTLGNSRTR | 475 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 24740667 | 24746260 | - | CaPI482276_07g010420.1 | Cam07g1042 | 131335 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cam07g1042 | 475 | MobiDBLite | consensus disorder prediction | 343 | 363 | - | - | |
| Cam07g1042 | 475 | PANTHER | BES1/BZR1 HOMOLOG PROTEIN 3-RELATED | 151 | 475 | IPR033264 | GO:0003700(InterPro)|GO:0006351(InterPro)|GO:0009742(InterPro) | |
| Cam07g1042 | 475 | MobiDBLite | consensus disorder prediction | 45 | 59 | - | - | |
| Cam07g1042 | 475 | Pfam | BES1/BZR1 plant transcription factor, N-terminal | 154 | 289 | IPR008540 | - | |
| Cam07g1042 | 475 | MobiDBLite | consensus disorder prediction | 238 | 272 | - | - | |
| Cam07g1042 | 475 | MobiDBLite | consensus disorder prediction | 32 | 69 | - | - | |
| Cam07g1042 | 475 | MobiDBLite | consensus disorder prediction | 241 | 272 | - | - | |
| Cam07g1042 | 475 | MobiDBLite | consensus disorder prediction | 92 | 112 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cam03g0700 | Cam-Chr3:7897565 | Cam07g1042 | Cam-Chr7:24740667 | 2.60E-123 | dispersed | |
| Cam07g1042 | Cam-Chr7:24740667 | Cam08g1999 | Cam-Chr8:25763997 | 2.70E-44 | dispersed | |
| Cam07g1042 | Cam-Chr7:24740667 | Cam01g1972 | Cam-Chr1:33020205 | 6.70E-51 | transposed |
Transcription factors information
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| 52297 | PF05687 | BES1_N | 3.00E-65 | No_clan | Cam | TF |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cam07g1042 | - | - | - | 0.0 |