Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam07g1057 ATGGCAATTTCCCATTTAGTACCTTATTATTCGCCTCTTCTACGCTTTTCTCTCGCTTCGACAAAGCTCACTCCTCAACTCCATTCTCACAGATACCGCTTCTTCTCCCTCCGTGCTTCTATGGCGTCTTCACCTGCTCGCAAGGTTTTGGTTCCGGTTGCCAACGGCACCGAGCCGCTTGAGGCAGTCATCACCATTGACGTGCTTCGACGTGCTGGAGCTGATGTTACCGTTGCTTCCGTCGAGAATCATATTCGTGTTGATGCTGCGCATCAGATCAAGATTGTTGCGGATTCTCTCATTTCCGATTGCGCGGATACTGTTTTCGATCTCATCGCCCTTCCTGGAGGTATGCCAGGTGCTACCAGTCTTAGAGATTGTGAAGTTTTGCAGAACATAGTGAAGAAGCAAGCTGCAGATGGTCGACTTTATGCTGCCATCTGTGCTTCACCTGCAGTGGTGCTTGGATCATGGGGTTTGCTGAAAGGGTTGAAAGCCACATGCTATCCATCATTTATGGAGCAACTGGGATCTACTGCAACTGCTGTTGAATCCCGAGTACAGATTGATGGCCAAGTTGTGACAAGTCGTGGGCCTGGTACTACCTTGGAGTTTGCCGTTGCTCTGGTTGAGCAGTTGTATGGGAAAGAAAAAGCTGACGAAGTTTCTGGACCTCTGTTGTTGCGTTCCAACCATGGTCATGAATATACCATAGCTGAGCACAATCAAGTAAAGTGGACATTTGATGATGGCCCAAGGATTCTTGTACCTATAGCTAATGGTACTGAGGAAATGGAGGCTGTTATGATCATTGACATTCTTCGGAGAGCAAAAGGGAAACTGGTGGTGGCTTCTGTTGAGGACAAACTAGAGATTCTTGCATCTCGAAAAGTTAAACTGGAGGCAGATTTACTTCTTGACGAAGCTGCTGAAAAGTCATACGATCTAATTGTTTTGCCTGGAGGGCTTGGTGGCGCGGAAGCATTTGCAAAATCTGAAAAACTGATTAATTTGCTAAAAAAGCAGAGAGAATCAAACAAACCCTATGGAGCAATATGTGCATCCCCGGCTTTGGCCTTAGAACCCCACGGCTTGCTGAAGAATAAGAAAGCAACTGCTTTTCCTGCATTATGTGACAAATTGTCCGACAAAAGCGAAATTGAAAACAGAGTGGTGGTTGACGGAAACCTGATTACAAGCCGAGGACCTGGAACTACGATGGAATTTTCTCTGGCAATCGTGGAGAAGCTTTTTGGAAGGGATACAGCAGTTCAACTGGGAAAAACAATGTTGAACTCTGTTCTTGTTGCGGTTTGCTTCTTTTCGCGTTTGGCGGCTCAGGAAACCACGACTAAACAAGGCTCTATTGTTATCTCTCTTTCTTCTAAAAGAAACCGAGATTCGTCGGATGCCCAAACAATTGCAGCAGTTGAAGAGATTTCAAATATTCCGAACGTTCGCTTGTACTCATACGAAGAACTTAGAAAAGCAACTGAAAATTTCAGGTCTGGAAACAAACTTGGGCAGGGAGGTTTTGGATCTGTCTACAAGGGAAGGCTCGGAAATGGAACCCTGGGTGCCATAAAGGTACTGTCCATGGATTCAAGCCAAGGGATGCGGGAGTTTTTGGCAGAAATCAATGTGATCTCAGTTATAAACCATGATAACTTGGTTACATTGCATGGTTATTGTGTGGAAGGGCAGCACCGGATCTTGGTCTATCCGTACCTAGAAAATAGCAGTCTCGACAAGATGCTTTTTGGTAGAGGACATGGGAATATTCAATTAAATTGGCAAACAAGGTGCAAAATATGCATTGGCATCGCACAGGGGCTAGCGTTCCTTCATGAGGAGGTTCAGCCGCATGTTATACATAGGGACATCAAGGCAAGCAATATCCTGCTTGATAAGGATTTAACCCCAAAAATTTCTGATTTTGGTCTTGCTAGACTACTCCCTGCTCACTTGACCCATGTTAGTACACGTGTTGCCGGGACAACAGGTTATCTTGCACCTGAATTTGCTATACGGGGGCAAGCGACAAGAAGAACGGATATTTATAGTTTTGGTGTCTTACTCTTGGAGATTGTTTGTGGGAGATACAACATAAATAGACGGCTTCCTGCTGAGGAACCATACCTTCTTGAAATGGTATGGGAGCATCATGAGAAAGGGCAATTGCTGGAATTGATAGACCTATCATTACATGGAGACTATGGGACTGAGGAGGCCTGCAGATATTTAAAAGTTGGTCTTCTCTGCACCCAAGATATGCCAAAACTCCGTCCATCTATGTCGACCGTCGTCAAGATGCTAACAGGTGATATTGATATATCTGATCAAACAATATCAAGACCAGGAATGCTTTCAGAGTTCATGCTTCGAAAAGATGTACTATGCAAGAAGGGCGAGTTAACAACTGAAGACTCAGGAAAGCCAATTGATTCAACTTCATCATCAGGATACATTGACACCTCACATGCTACAATAACCTTCAATTCGATATTTGATCGTAGTAACTGA 2523 44.55 MAISHLVPYYSPLLRFSLASTKLTPQLHSHRYRFFSLRASMASSPARKVLVPVANGTEPLEAVITIDVLRRAGADVTVASVENHIRVDAAHQIKIVADSLISDCADTVFDLIALPGGMPGATSLRDCEVLQNIVKKQAADGRLYAAICASPAVVLGSWGLLKGLKATCYPSFMEQLGSTATAVESRVQIDGQVVTSRGPGTTLEFAVALVEQLYGKEKADEVSGPLLLRSNHGHEYTIAEHNQVKWTFDDGPRILVPIANGTEEMEAVMIIDILRRAKGKLVVASVEDKLEILASRKVKLEADLLLDEAAEKSYDLIVLPGGLGGAEAFAKSEKLINLLKKQRESNKPYGAICASPALALEPHGLLKNKKATAFPALCDKLSDKSEIENRVVVDGNLITSRGPGTTMEFSLAIVEKLFGRDTAVQLGKTMLNSVLVAVCFFSRLAAQETTTKQGSIVISLSSKRNRDSSDAQTIAAVEEISNIPNVRLYSYEELRKATENFRSGNKLGQGGFGSVYKGRLGNGTLGAIKVLSMDSSQGMREFLAEINVISVINHDNLVTLHGYCVEGQHRILVYPYLENSSLDKMLFGRGHGNIQLNWQTRCKICIGIAQGLAFLHEEVQPHVIHRDIKASNILLDKDLTPKISDFGLARLLPAHLTHVSTRVAGTTGYLAPEFAIRGQATRRTDIYSFGVLLLEIVCGRYNINRRLPAEEPYLLEMVWEHHEKGQLLELIDLSLHGDYGTEEACRYLKVGLLCTQDMPKLRPSMSTVVKMLTGDIDISDQTISRPGMLSEFMLRKDVLCKKGELTTEDSGKPIDSTSSSGYIDTSHATITFNSIFDRSN 840
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 24920524 24935580 + CaPI482276_07g010570.1 Cam07g1057 131350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam07g1057 840 FunFam Serine/threonine-protein kinase receptor 471 576 - -
Cam07g1057 840 SUPERFAMILY Class I glutamine amidotransferase-like 253 431 IPR029062 -
Cam07g1057 840 CDD STKc_IRAK 507 774 - -
Cam07g1057 840 ProSiteProfiles Protein kinase domain profile. 501 783 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam07g1057 840 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 387 796 IPR052059 GO:0004674(PANTHER)|GO:0006468(PANTHER)
Cam07g1057 840 Pfam DJ-1/PfpI family 47 212 IPR002818 -
Cam07g1057 840 Pfam DJ-1/PfpI family 253 415 IPR002818 -
Cam07g1057 840 CDD GATase1_DJ-1 254 417 - -
Cam07g1057 840 SMART serkin_6 501 772 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam07g1057 840 FunFam Protein DJ-1 homolog C 246 434 - -
Cam07g1057 840 FunFam Protein DJ-1 homolog C 41 231 - -
Cam07g1057 840 ProSitePatterns Serine/Threonine protein kinases active-site signature. 623 635 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam07g1057 840 Gene3D - 40 241 IPR029062 -
Cam07g1057 840 Gene3D - 248 436 IPR029062 -
Cam07g1057 840 FunFam Putative LRR receptor-like serine/threonine-protein kinase 577 784 - -
Cam07g1057 840 CDD GATase1_DJ-1 49 213 - -
Cam07g1057 840 Pfam Protein tyrosine and serine/threonine kinase 504 769 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam07g1057 840 Gene3D Phosphorylase Kinase; domain 1 472 576 - -
Cam07g1057 840 Coils Coil 283 303 - -
Cam07g1057 840 NCBIfam DJ-1 family glyoxalase III 253 426 IPR006287 -
Cam07g1057 840 NCBIfam DJ-1 family glyoxalase III 48 223 IPR006287 -
Cam07g1057 840 Gene3D Transferase(Phosphotransferase) domain 1 577 783 - -
Cam07g1057 840 SUPERFAMILY Class I glutamine amidotransferase-like 47 228 IPR029062 -
Cam07g1057 840 SUPERFAMILY Protein kinase-like (PK-like) 480 772 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam07g1057 Cam-Chr7:24920524 Cam09g2296 Cam-Chr9:37424461 3.70E-89 dispersed
Cam02g0636 Cam-Chr2:7341427 Cam07g1057 Cam-Chr7:24920524 2.20E-100 transposed
Cam03g0596 Cam-Chr3:6803201 Cam07g1057 Cam-Chr7:24920524 2.70E-88 transposed
Cam04g0831 Cam-Chr4:22561098 Cam07g1057 Cam-Chr7:24920524 3.10E-90 transposed
Cam07g1093 Cam-Chr7:25414110 Cam07g1057 Cam-Chr7:24920524 1.90E-129 transposed
Cam10g2162 Cam-Chr10:35118581 Cam07g1057 Cam-Chr7:24920524 3.10E-88 transposed
Cam01g2440 Cam-Chr1:36237602 Cam07g1057 Cam-Chr7:24920524 1.50E-65 wgd
Cam11g1755 Cam-Chr11:30096990 Cam07g1057 Cam-Chr7:24920524 2.90E-53 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85314 PF00069 Pkinase 4.10E-43 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam07g1057 K03152 - csv:101212934 775.393