Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam07g1060 ATGCCGCAAGATCATCCAAAGAAGGATGCCAAAGAAATAAACTTTTTTACTGAATATGGGGATGCTAACAGATATAAGATTCTTGAAGTTGTTGGAAGGGGAAGTTATGGAGTTGTTTGTTCTGCTATTGACATGCAAACTGGGGAGAAAGTTGCAATAAAGAGAATTCATGATATTTTTGATCACGCATCTGATGCTATTCGAATCCTTCGTGAAGTTAAGTTGCTTAGATTGTTGCGGCATCCTGATATTGTTGACATCAAGCGTATTATGTTACCACCTTCTAAAAAGGAATTTAGGGACATTTATGTGGTTTTTGAGCTTATGGAATCTGATCTTCATCAAGTTATTAAAGCAAATGATGACTTGACGCGTGAACATCATCAATTTTTCCTCTATCAAATGCTACGTGCATTGAAATTCATGCATACAGCAAATGTGTATCATAGAGATCTGAAGCCGAAGAATATATTGGCAAATGCGAATTGCAAGCTTAAAATTTGTGATTTTGGGCTTGCAAGAGTTGCTTTCAGTGACACCCCAACTACTGTATTTTGGACAGACTATGTTGCTACTCGATGGTACAGAGCTCCAGAGTTGTGTGGATCATTCTGTTCCAAGTATACTCCTGCGATAGATATTTGGAGTGTCGGCTGCATATTCGCTGAGGTTTTGATGGGGAAGCCACTGTTTCCGGGTAAAAGCGTTGCCCATCAATTGGACTTGATTACTGATCTTCTTGGGACTCCCTCATTGGAAACCATTGCAGGAGTTCGGAATGAAAAGGCCAGGAAATATTTGACAGAAATGAGAAAGAAATCTGCAGTGCCATTTTCACAAAGATTTCCCAATGCAGATCCTACAGCCATCCGCTTATTGCAAAGACTATTAGCATTTGATCCAAAGGATCGACCATCGGCTGTGGAGGCTCTGGCTGATCCTTACTTTAAGGGCCTAGCTAAAGTTGAAAGAGAGCCTTCTTGTCAACCAATCTCAAGAGCGGAATTTGAGTTTGAGAGACGGAAATTAACAAGGGATGATGTGAGGGAATTGTTATACAGAGAAATATTAGAATATCATCCTCAAATTCGTGAAGATTACTTGAATGGAACTGAGACTTCAAAGCTCCTTTATCCTAGCGTTACAGGTCATTTTAAAAGCCAATTCACCTTCCACAAGGAGAATAACGGTAAAAGCGCACCTGTTTTGCCTCTAGAACGGAAACACTTCTCCCTGCCACGGTCCACTGTTTGCACAAATTTGGCTTCACCTGATCGTGAACCCGTTCGACGAAATCCCAAAGTCTTTAATAATAGTATGGGATTACCTGATAGAAAATTTGTGAATCCATCCAAGGCTCATCCTCCACCTAAAGTGCCTACTGGACGAGTTGCTGGGCCTGTCCTCCCTTATGAGCACAGAAACATAAAAGATGTTTATTCGAACCTAACGTCACAGATTAGAAGTTTGGATTTCTGA 1479 40.64 MPQDHPKKDAKEINFFTEYGDANRYKILEVVGRGSYGVVCSAIDMQTGEKVAIKRIHDIFDHASDAIRILREVKLLRLLRHPDIVDIKRIMLPPSKKEFRDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKFMHTANVYHRDLKPKNILANANCKLKICDFGLARVAFSDTPTTVFWTDYVATRWYRAPELCGSFCSKYTPAIDIWSVGCIFAEVLMGKPLFPGKSVAHQLDLITDLLGTPSLETIAGVRNEKARKYLTEMRKKSAVPFSQRFPNADPTAIRLLQRLLAFDPKDRPSAVEALADPYFKGLAKVEREPSCQPISRAEFEFERRKLTRDDVRELLYREILEYHPQIREDYLNGTETSKLLYPSVTGHFKSQFTFHKENNGKSAPVLPLERKHFSLPRSTVCTNLASPDREPVRRNPKVFNNSMGLPDRKFVNPSKAHPPPKVPTGRVAGPVLPYEHRNIKDVYSNLTSQIRSLDF 492
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 24961227 24965117 + CaPI482276_07g010600.1 Cam07g1060 131353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam07g1060 492 FunFam Mitogen-activated protein kinase 111 339 - -
Cam07g1060 492 ProSitePatterns Protein kinases ATP-binding region signature. 31 54 IPR017441 GO:0005524(InterPro)
Cam07g1060 492 SUPERFAMILY Protein kinase-like (PK-like) 20 320 IPR011009 -
Cam07g1060 492 Gene3D Transferase(Phosphotransferase) domain 1 111 339 - -
Cam07g1060 492 ProSitePatterns MAP kinase signature. 60 163 IPR003527 GO:0004707(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam07g1060 492 SMART serkin_6 25 316 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam07g1060 492 Pfam Protein kinase domain 25 316 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam07g1060 492 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 22 357 IPR050117 GO:0004674(PANTHER)|GO:0004707(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0035556(PANTHER)
Cam07g1060 492 ProSiteProfiles Protein kinase domain profile. 25 316 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam07g1060 492 Gene3D Phosphorylase Kinase; domain 1 40 362 - -
Cam07g1060 492 FunFam Mitogen-activated protein kinase 14 119 - -
Cam07g1060 492 MobiDBLite consensus disorder prediction 423 464 - -
Cam07g1060 492 CDD STKc_TDY_MAPK 24 361 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam02g1903 Cam-Chr2:32077271 Cam07g1060 Cam-Chr7:24961227 3.50E-206 dispersed
Cam07g1060 Cam-Chr7:24961227 Cam09g2271 Cam-Chr9:37215197 2.60E-207 dispersed
Cam10g0105 Cam-Chr10:2630150 Cam07g1060 Cam-Chr7:24961227 2.20E-49 transposed
Cam01g2439 Cam-Chr1:36221476 Cam07g1060 Cam-Chr7:24961227 3.30E-21 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85315 PF00069 Pkinase 5.20E-65 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam07g1060 - - - 0.0