Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam07g1079 ATGAGGAAGAAAGGGACAAAGGTGTCATTATCACGTGGTAGCTTTGGTGTTTATGGTAATAGTTTTCATCAAGATGCATGGGTGTTGAGAAAGTGCATGAGAAACACCAAAATCAGTTTGTCCCTCTCTCACCTACGAGAGTCTGAAGAAGTGGGTGCCTGGAAGCTTAACACTGATGTGTCTTGGAGCGAGTCCAAGCTGCGAGAGGGACTGTCTTTGAACCTTCGAGACCACCGAGCCTCAGTCACCGGGCGGAGCCGAGGCCAACTCTGGTTTCTTCTCATCGGGGCATATCGTTGTTTGATGTCGAGCAGCAACATGGGGCTGCGTTTTATGTCATACCCACGGAAGAATCTGCTGACGAAGTTCTCGTCTCTGTTCCCAATAACTGCAATTTCCAGTATCAAGACTGTCAAAGGGGGTTTCTCTTGCAGTTGTAGTGTTGGTTGTCAATTCAACTTGGATGATTTTAGCAGCAAGAAGAGGCATTTGGAAAGAGTTCACTCCACCAATTCAAATGGGAAGTTTAGCAATAAGGAGTTTATTAGTGTTGATCCACAACTTTACGAGTATATTCTCTCCAATGTTCGAGAGCCTGAGATCCTGGGGAAACTTCGTGAGGAGACTGCCTCAATGCGTGGTAGCAAAATGCAGGTATCCCCCGATCAAGCACAACTTCTTGCAATGCTTGTTCAGATTCTTGGTGCTAAGAGGTGCATCGAAGTGGGTGTTTACACTGGATATTCGTCTTTGGCCGTAGCACTAGTCCTGCCAGAATCAGGGCATTTAGTTGCCTGTGAAAGAGATCTCAAATACCTTGAGGTTGCTAAAAGATATTATGAACTTGCCGGTGTTTCACACAAAGTGGATATGAGACATGGACTTGCAGCAGATACACTCAAATCACTTATTTCAAATGGTGAAGCTTGCAGCTATGATTTTGCCTTCATCGATGCCGAGAAGAGGATGAATGAGGAATACTTCGAACTGCTACTACAATTGGTCAGGGTTGGAGGCTTAATTGTGATTGACAATGTCCTTTGGTACGGAAAAGTAGCTGACCCGATGGTTAATGACAAGAGAACCGATAGCATCAGGAGATTGAATAAAAAGATAATGGAAGACAATCGAGTTGGGATAAGCATGGTACCTATTGGAGATGGCATGACAATTTGCCAAAAGAGATGA 1188 44.61 MRKKGTKVSLSRGSFGVYGNSFHQDAWVLRKCMRNTKISLSLSHLRESEEVGAWKLNTDVSWSESKLREGLSLNLRDHRASVTGRSRGQLWFLLIGAYRCLMSSSNMGLRFMSYPRKNLLTKFSSLFPITAISSIKTVKGGFSCSCSVGCQFNLDDFSSKKRHLERVHSTNSNGKFSNKEFISVDPQLYEYILSNVREPEILGKLREETASMRGSKMQVSPDQAQLLAMLVQILGAKRCIEVGVYTGYSSLAVALVLPESGHLVACERDLKYLEVAKRYYELAGVSHKVDMRHGLAADTLKSLISNGEACSYDFAFIDAEKRMNEEYFELLLQLVRVGGLIVIDNVLWYGKVADPMVNDKRTDSIRRLNKKIMEDNRVGISMVPIGDGMTICQKR 395
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 25256153 25261644 + CaPI482276_07g010790.1 Cam07g1079 131372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam07g1079 395 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 178 395 IPR002935 GO:0008171(InterPro)
Cam07g1079 395 PANTHER O-METHYLTRANSFERASE-RELATED 182 394 IPR050362 GO:0008757(PANTHER)
Cam07g1079 395 ProSitePatterns Zinc finger C2H2 type domain signature. 146 168 IPR013087 -
Cam07g1079 395 Gene3D Vaccinia Virus protein VP39 167 395 IPR029063 -
Cam07g1079 395 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 189 395 IPR029063 -
Cam07g1079 395 Pfam O-methyltransferase 196 394 IPR002935 GO:0008171(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam07g1079 Cam-Chr7:25256153 Cam11g1402 Cam-Chr11:26683043 1.00E-36 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam07g1079 - - - 0.0