Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam07g1084 ATGGGGGACGAAGTGAAGCTTTTAGATTTTTGGCCCAGCATGTTCGGTATGCGAGTCAGAGTAGCTCTGGCTCTAAAGGGCGTACCGAACGAATATGTGGATGAAGATCTAAGGAACAAGAGCTCTTTGCTTCTTCAAATGAACCCAATTCATAAGAAGATCCCTGTTCTTGTTCATAATGGAAAACCCATTTGTGAATCTTCCATAATCGTTCAGTATATTGATGAAGTTTGGAAGGATAAAGCTCCTCTGTTGCCATCTGATCCTTATGACAGAGCTCAGGCCAGATTTTGGGTAGATTTCATCGACAAGAAGCTTTTTGATGGTGGAAGGAAAATTTGGGCTACCAAAGGAGAGGAGCAAGAAGAAGGTAAGAAGGAGGTAATAGGAATATTGAAACAATTGGAAGAAGTTCTTGGGGAGAAGGGTTTGTTTGGAGGTGAATGTTTGGGATTTTTAGACATTGTTTTGATTGGATATTACACTTGGTTTTATGCCTATGAGACCATTGGAAACTTCAGCATTGAGGCTGAGTGTCCAAAGATAATGAGTTGGGTGAAGAGATGCTTACAAAATGAGAGTGTTGCTAAGTCTCTGCCTGACCCCAAGAAGGTTTGTGATTTTGTGCTTCAAATGAAGAAAAAGTATGGCCTTCACTAA 660 40.76 MGDEVKLLDFWPSMFGMRVRVALALKGVPNEYVDEDLRNKSSLLLQMNPIHKKIPVLVHNGKPICESSIIVQYIDEVWKDKAPLLPSDPYDRAQARFWVDFIDKKLFDGGRKIWATKGEEQEEGKKEVIGILKQLEEVLGEKGLFGGECLGFLDIVLIGYYTWFYAYETIGNFSIEAECPKIMSWVKRCLQNESVAKSLPDPKKVCDFVLQMKKKYGLH 219
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 25298025 25298783 + CaPI482276_07g010840.1 Cam07g1084 131377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam07g1084 219 Gene3D Glutaredoxin 1 87 - -
Cam07g1084 219 CDD GST_C_Tau 89 212 IPR045074 GO:0004364(InterPro)|GO:0006749(InterPro)
Cam07g1084 219 Pfam Glutathione S-transferase, C-terminal domain 116 191 IPR004046 -
Cam07g1084 219 FunFam Glutathione S-transferase U20 88 219 - -
Cam07g1084 219 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
Cam07g1084 219 SFLD Main.3: Omega- and Tau-like 2 217 IPR045073 -
Cam07g1084 219 FunFam Tau class glutathione S-transferase 1 87 - -
Cam07g1084 219 Gene3D - 88 219 - -
Cam07g1084 219 SUPERFAMILY GST C-terminal domain-like 76 216 IPR036282 -
Cam07g1084 219 Pfam Glutathione S-transferase, N-terminal domain 5 76 IPR004045 -
Cam07g1084 219 SFLD Glutathione Transferase (cytosolic) 2 217 IPR040079 -
Cam07g1084 219 SUPERFAMILY Thioredoxin-like 5 106 IPR036249 -
Cam07g1084 219 CDD GST_N_Tau 5 78 - -
Cam07g1084 219 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 216 IPR010987 -
Cam07g1084 219 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 4 209 IPR045073 GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam06g1590 Cam-Chr6:27372713 Cam07g1084 Cam-Chr7:25298025 1.10E-40 dispersed
Cam07g1082 Cam-Chr7:25284797 Cam07g1084 Cam-Chr7:25298025 5.50E-101 dispersed
Cam07g1083 Cam-Chr7:25295552 Cam07g1084 Cam-Chr7:25298025 2.80E-100 tandem
Cam07g1084 Cam-Chr7:25298025 Cam07g1085 Cam-Chr7:25302466 3.10E-59 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam07g1084 K00799 - csv:101217848 407.142