Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cam07g1085 | ATGAGAGTGAGGGTGGCTTTGGCAGAGAAAGGCATAAAATATGAAGGAAAAGAGGAAGATTTGAGCAACAAAAGCCCTTTGCTTTTGGAGATGAATCCTATTTACAAACAAATCCCAGTTTTGATTCACAAAGGGAAACCCATTATTGAGTCCTCTCTCATTGTTGAATATATTGATGAGGTTTGGAGTGACAATGGGGAAGCTTATACTAATTTGCTTCCTTCTCATCCTTTTGACAGAGCCCATGCTAGGTTTTGGGTTGACTATGTGGACAAGAAGATTTATCCCATTGGAAGTAAGCTATGGAATAGAGAGAAGACAAAAGAGGAGAAAGAAGCAGCAGCAAAGGAATTGTTGGAGTGCTTTAAGCAGCTGGAAGAAGAGCTTGGAGAAAAAGACTATTTTGGTGGCCAAACATTTGGGATTATAGATATTGCTCTCATTCCATTTTACGGCATGTTTCTTGCATTCAAATTGCTTGGAAATTTGGATTTAGAAGTTGAATGTCCCAAGATCTTCCAATGGGTTAAGAGGTGCATTCAAAGAGAGAGTGTCTCAAACAATATGCCTGCCCAACCAGAGGTTTACAACATCGCTTTGGAATTCTTAGGACTTAAGCATTGA | 624 | 39.42 | MRVRVALAEKGIKYEGKEEDLSNKSPLLLEMNPIYKQIPVLIHKGKPIIESSLIVEYIDEVWSDNGEAYTNLLPSHPFDRAHARFWVDYVDKKIYPIGSKLWNREKTKEEKEAAAKELLECFKQLEEELGEKDYFGGQTFGIIDIALIPFYGMFLAFKLLGNLDLEVECPKIFQWVKRCIQRESVSNNMPAQPEVYNIALEFLGLKH | 207 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 25302466 | 25303386 | + | CaPI482276_07g010850.1 | Cam07g1085 | 131378 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cam07g1085 | 207 | CDD | GST_C_Tau | 77 | 202 | IPR045074 | GO:0004364(InterPro)|GO:0006749(InterPro) | |
| Cam07g1085 | 207 | PANTHER | GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING | 1 | 196 | IPR045073 | GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER) | |
| Cam07g1085 | 207 | Pfam | Glutathione S-transferase, N-terminal domain | 1 | 60 | IPR004045 | - | |
| Cam07g1085 | 207 | SUPERFAMILY | Thioredoxin-like | 1 | 95 | IPR036249 | - | |
| Cam07g1085 | 207 | SFLD | Glutathione Transferase (cytosolic) | 1 | 198 | IPR040079 | - | |
| Cam07g1085 | 207 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 1 | 66 | IPR004045 | - | |
| Cam07g1085 | 207 | Gene3D | - | 76 | 205 | - | - | |
| Cam07g1085 | 207 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 76 | 202 | IPR010987 | - | |
| Cam07g1085 | 207 | Coils | Coil | 108 | 128 | - | - | |
| Cam07g1085 | 207 | Pfam | Glutathione S-transferase, C-terminal domain | 100 | 183 | IPR004046 | - | |
| Cam07g1085 | 207 | SFLD | Main.3: Omega- and Tau-like | 1 | 198 | IPR045073 | - | |
| Cam07g1085 | 207 | SUPERFAMILY | GST C-terminal domain-like | 61 | 200 | IPR036282 | - | |
| Cam07g1085 | 207 | Gene3D | Glutaredoxin | 1 | 75 | - | - | |
| Cam07g1085 | 207 | CDD | GST_N_Tau | 1 | 62 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cam07g1083 | Cam-Chr7:25295552 | Cam07g1085 | Cam-Chr7:25302466 | 4.70E-60 | dispersed | |
| Cam07g1084 | Cam-Chr7:25298025 | Cam07g1085 | Cam-Chr7:25302466 | 3.10E-59 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cam07g1085 | K00799 | - | mdm:103427999 | 260.381 |