Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam07g1093 ATGAACATGAAATGGACCAACGTCATCGATTTGTTGGTTGAAAAAATGAAGGCAGCTATTTGGTTTAAGGCTACGAATTCTCTCAGCTCACCTTCTAAGATTTCAGTATTTAAAAGGGTAAAACCCCCAACAAGAAGTTTGGTCGATGAAGAAGAATTTTCGAGCATGCAAAATGTTAAATTTTACACATACAAAGAGCTAAAAGTTGCAACCGAAGATTTCAGCTTGGCGAATAAAATAGGGGAGGGAGGTTTTGGTTCTGTCTACAAGGGAAAGCTAAAAGATGGAAAGATTGCTGCCATAAAAGTTCTTTCGGCTGAGTCAAGACAAGGATTGAGGGAATTCTTGACAGAAATTAATGTCATCTCTGTGATAGAACATGAAAATCTGGTTCAGCTTTATGGCTGCTGTGTGGATGATAATCATAGAATTCTTGTCTACAATTACCTTGAGAACAATAGCCTCGCCCAAACTCTTCTTGGGCGAGGTTACAGTAGCATCCAGTTTAATTGGCAAACAAGGTCTAAGATTTGCATTGGAATTGCACGTGGCCTTGCCTTCCTTCACGAGGATGTACAGCCACATATCATTCATAGAGATATCAAAGCGAGCAACATTCTTCTTGATCATGACCTCTCTCCTAAAATTTCAGATTTTGGTCTTGCAAAGCTTATTCCAGCGAGCATGACTCACGTCAGTACACGAGTGGCAGGAACAATTGGTTACCTAGCTCCAGAATATGCGATAAGAGGGCAGGTGACAAGAAAATCAGATATTTACAGTTTTGGAGTCCTCCTTGTGGAAATAGTCAGCGGGAGATGCAACACAAATACACAATTACCAATTGGAGAACAATATCTTCTTGAAAGGACATGGAATCTTTATGAGCGAGGAGAGCTCGTTCTGCTAGTTGATTTGTCCTTAAATGGCGACTTCGATGCAGAGGAGGCTTGTAAATATCTAAAGATTGGTCTACTTTGCACACAAGACAGTCCAAAACTCCGTCCATCCATGTCGACTGTGGTAAAGATGCTAACAGGAGAGATGAGTATTGAAGACAGAAAGATAACAAAACCGGGGCTGATTTCGGACTTCATGGATCTAAAAGTAAAGAATCCAGAGGAAAAGAAAGGGAATAGAGAGGGGGTGTCTTCTGATAGTCTATCCTCTGGATCAAACATCCTTGGAAATTCAACAATGTCATCTGAAGCCTCAACTGTTACATCTACAACCTTCACTGCACAATATGACAGGAATACTTTCTCATCTGTAATGTGA 1278 40.53 MNMKWTNVIDLLVEKMKAAIWFKATNSLSSPSKISVFKRVKPPTRSLVDEEEFSSMQNVKFYTYKELKVATEDFSLANKIGEGGFGSVYKGKLKDGKIAAIKVLSAESRQGLREFLTEINVISVIEHENLVQLYGCCVDDNHRILVYNYLENNSLAQTLLGRGYSSIQFNWQTRSKICIGIARGLAFLHEDVQPHIIHRDIKASNILLDHDLSPKISDFGLAKLIPASMTHVSTRVAGTIGYLAPEYAIRGQVTRKSDIYSFGVLLVEIVSGRCNTNTQLPIGEQYLLERTWNLYERGELVLLVDLSLNGDFDAEEACKYLKIGLLCTQDSPKLRPSMSTVVKMLTGEMSIEDRKITKPGLISDFMDLKVKNPEEKKGNREGVSSDSLSSGSNILGNSTMSSEASTVTSTTFTAQYDRNTFSSVM 425
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 25414110 25418460 - CaPI482276_07g010930.1 Cam07g1093 131386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam07g1093 425 SMART serkin_6 74 345 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam07g1093 425 SUPERFAMILY Protein kinase-like (PK-like) 54 345 IPR011009 -
Cam07g1093 425 ProSitePatterns Serine/Threonine protein kinases active-site signature. 196 208 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam07g1093 425 Pfam Protein kinase domain 76 279 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam07g1093 425 MobiDBLite consensus disorder prediction 373 409 - -
Cam07g1093 425 ProSitePatterns Protein kinases ATP-binding region signature. 80 102 IPR017441 GO:0005524(InterPro)
Cam07g1093 425 MobiDBLite consensus disorder prediction 383 409 - -
Cam07g1093 425 CDD STKc_IRAK 80 347 - -
Cam07g1093 425 FunFam cold-responsive protein kinase 1 150 361 - -
Cam07g1093 425 FunFam cold-responsive protein kinase 1 45 149 - -
Cam07g1093 425 Gene3D Phosphorylase Kinase; domain 1 45 149 - -
Cam07g1093 425 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 42 381 IPR052059 GO:0004674(PANTHER)|GO:0006468(PANTHER)
Cam07g1093 425 Gene3D Transferase(Phosphotransferase) domain 1 150 359 - -
Cam07g1093 425 ProSiteProfiles Protein kinase domain profile. 74 351 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam04g0831 Cam-Chr4:22561098 Cam07g1093 Cam-Chr7:25414110 3.50E-102 dispersed
Cam07g1093 Cam-Chr7:25414110 Cam10g2162 Cam-Chr10:35118581 2.40E-92 dispersed
Cam07g1093 Cam-Chr7:25414110 Cam07g1057 Cam-Chr7:24920524 1.90E-129 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85317 PF00069 Pkinase 3.70E-47 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam07g1093 - - - 0.0