Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam07g1113 ATGGAGCCGTCTCTTGAACTTTCAGAAACGCCTGAGCAGATTATTCTACGATGGGACTCGGCCGCACCGGAGGAGGTGAAGGATAAGATGATTTTTGACTCTGACAGGGAAGAGATCGACCGTTATTTGCAGGCTGTTGATGAAATCCAGAGGTCTATGTCGTCGGCTACCATTTCGGACGATCAGAACAAAGTCGATTCCACTATGCAGATCGCCATGGCTAGGCTTGAGGATGAGTTCCGTCACATTCTTTCCAGTCATACCACTCCGATCGAGGTCGAGTCGCTTACTGATCCGAGTCCATCTTCTCGCTCCATGTCTACTAGTGGGAGTGGTGTGTTCGAGGATGAAAACGATGAGGAACCGGAGTTACAGGAAGTTCAGCTCGATTTAACTGGCAGTCCAAGTTTTGGGTCCAGCGGTCGATCGAGCTACCGGGCGACCAGCAGTATTCGTGAAATTGATCTGATACCTTCGGATGCGGTTATCGATCTACGAAGTATTGCTGAACGGATGATATCGGCGGGGTACCTGCGGGAGTGCATCCAAGTTTATGGCAGTGTGCGAAAGTCCACCTTCGACTCCAGCTTCCGACGGCTCGGAATTGAGAAACTGAGCATTGGAGATATCCAGAGGCTGGATTGGAATGAGCTGGAGACGAAGATCAGAAGGTGGATTAGAGCAGCAAAGGTGTCTATTAGGACTTTGTTTTCCAGCGAGAAGAAACTCTGCGAGCAAATTTTTTATGGCATAGGGACCGCCATAGATGATGCTTGTTTCATGGAGACTGTAAAAGGTCCTGTGACTCAGTTGTTCAATTTCGCCGAAGCGATCAGTATAAGCCGCAGATCGCCGGAGAAGCTGTTCAAGATTCTAGACCTCCACGATGCCTTCACGGAGTTGATACCTGACATTGATATAATATTCGAATCAAAATCTGCGGAGTATATCCGAATTCAGGCGGCGGAGATATTGTCGCGGCTGGCGGAGGCCGTCAGAGGGACTTTATCGGAGTTTGAAAATGCGGTGCTGCGGGAGCCGTCGACGCATCCGGTTCCCGGCGGAACGCTTCATCCGTTGACAAGGTACGTAATGAACTATGTGAGTCTGATTTCGGACTACAAAGTGACCTTAGACGAGCTCATCGTGTCCAAACCATCGACGGGCTCGAGGTATTCGGCCGACCCCACAACCCCAGATATGGACTTCGGTGAGCTAGAGGGCAAAACGCCATTAGCGCTCCATCTTATATGGAGCATCGTGATTCTGCAGTTCAATTTGGAGGGGAAATCCAGGCACTACAAAGACCCTTCGCTAGCTCATCTCTTCATCATGAACAACGTTCATTACATCGTTCAGAAGATAAAAGGATCCCCAGAGTTGCGAGAAATGATCGGAGACGTTTATCTAAAAAGGCTGACCGGGAAGTTTCGACAGGCGGCCACAAACTACGAGAGAACAACGTGGGTGAATGTGCTGTATTGCCTGCGAAACGAAGGGTTGAATGTGGGCGGGAGCTTGTCTTCCGGCCCCGCAAAGAGTCTTATTAGAGATAGATTCAAGACTTTCAACGCCATGTTTGAGGAGGTTCACAGGACACAATCAGCATGGTTGATACCAGATTCTCAGCTGAGGGAGGAGCTGCGTATATCCATAACTGAGAAGTTGATTCCAGCTTACAGGTCGTTTCTTGGCCTCCATGGCCACCACATAGAGAGTGGAAAACACCCCGAAAATTACATCAAGTACTCCGTCGAGGAACTGGAAAATGCCATCTTGGATTTCTTTGAGGGTTGCTCGGCAACCCATAACTTGAGAAGGAGATCTCACTGA 1833 49.32 MEPSLELSETPEQIILRWDSAAPEEVKDKMIFDSDREEIDRYLQAVDEIQRSMSSATISDDQNKVDSTMQIAMARLEDEFRHILSSHTTPIEVESLTDPSPSSRSMSTSGSGVFEDENDEEPELQEVQLDLTGSPSFGSSGRSSYRATSSIREIDLIPSDAVIDLRSIAERMISAGYLRECIQVYGSVRKSTFDSSFRRLGIEKLSIGDIQRLDWNELETKIRRWIRAAKVSIRTLFSSEKKLCEQIFYGIGTAIDDACFMETVKGPVTQLFNFAEAISISRRSPEKLFKILDLHDAFTELIPDIDIIFESKSAEYIRIQAAEILSRLAEAVRGTLSEFENAVLREPSTHPVPGGTLHPLTRYVMNYVSLISDYKVTLDELIVSKPSTGSRYSADPTTPDMDFGELEGKTPLALHLIWSIVILQFNLEGKSRHYKDPSLAHLFIMNNVHYIVQKIKGSPELREMIGDVYLKRLTGKFRQAATNYERTTWVNVLYCLRNEGLNVGGSLSSGPAKSLIRDRFKTFNAMFEEVHRTQSAWLIPDSQLREELRISITEKLIPAYRSFLGLHGHHIESGKHPENYIKYSVEELENAILDFFEGCSATHNLRRRSH 610
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 25623771 25625603 - CaPI482276_07g011130.1 Cam07g1113 131406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam07g1113 610 Pfam Exocyst complex component Exo70 N-terminal 12 85 - -
Cam07g1113 610 SUPERFAMILY Cullin repeat-like 11 597 IPR016159 -
Cam07g1113 610 PANTHER EXOCYST COMPLEX PROTEIN EXO70 11 598 IPR004140 GO:0000145(PANTHER)|GO:0000145(InterPro)|GO:0006887(InterPro)|GO:0006887(PANTHER)
Cam07g1113 610 MobiDBLite consensus disorder prediction 87 123 - -
Cam07g1113 610 Gene3D Exocyst complex component Exo70 14 606 - -
Cam07g1113 610 MobiDBLite consensus disorder prediction 88 113 - -
Cam07g1113 610 Pfam Exo70 exocyst complex subunit C-terminal 224 594 IPR046364 GO:0000145(InterPro)|GO:0005546(InterPro)|GO:0006887(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam05g2389 Cam-Chr5:31922780 Cam07g1113 Cam-Chr7:25623771 9.30E-104 dispersed
Cam07g1113 Cam-Chr7:25623771 Cam07g1654 Cam-Chr7:31101491 9.60E-103 dispersed
Cam07g1113 Cam-Chr7:25623771 Cam02g2134 Cam-Chr2:34116291 1.30E-88 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam07g1113 K07195 - csv:101204229 1130.55