Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam07g1131 ATGGATACCGTCAAGTCTTTCAAGGGCTACGGCAAGGTCGACGAGCTCGAACAGCAAGCTTTCCGCCAAAAGACTCGTCGCCGGCTAATCATACTCCTTCTTTCCATTCTTCTTCTAATTGCTCTCGTCATCGGCGCCGTCGTCGGAATTGTCATTCATAAACGAAACTCTTCTTCTTCATCGCCCACCAGCTCAGCTCCTCCCACCGAGCTCACTCCCGCTGCCTCACTCAAAACTCTCTGTAGTGTTACTCAGTATCCCAGTTCCTGTCAGTCCTCTCTCCAAAACTCCAACACTACCGATCCGGTATTTCTCTTCAAGCTTTCTCTCCGAGTTGCCACCGATTCCCTCTCGAAACTTTCCGATTATACCTCTACTCTCAATTCCAATACTAGAGATCCGAAGGTTAAAGCCGCCATTGAAATCTGCCGGAGTGTTTTTGAAGATGCCATTGACACGCTAAACGACACCGTTTCATCCATGGAAGTGGATCACCATAGTGAGAAGTTCTTGTCGCCGTCTAGGATTGAAGATCTGAAAACCTGGCTGAGCACTACAATCACAGATCAAGAAACCTGCCTCGACGCAGTTCGAGATCTAAACCAGACGACGCTTCTCCAAAACTTGCAAACGGCAATGGCGAACTCTACCGAGTTTACTAGCAATAGTTTAGCGATTGTAACGAAAATCCTTGGACTGTTGGCTGATTTCAACATCCCTATCCACCGGAAGCTGATGGGACTCCCGGAGTGGTTAAGCTCCGGCGATCGAAGGCTTCTGCAGGAGAACAATGTGACGGCGCATATGACGGTGTCGAAGGATGGGAAAGGGCACTACACAACGATCAAAGATGCCGTAGCGGCGGTGCCAAAGAAGAGCAAAGAAAGATTCATCATACATGTAAAAGAAGGAATATACGAAGAGAATGTGATTCTGGACAAGAACAAGTGGAACGTTATGATGTATGGAGATGGCAGAACCAAAACCATTGTTTCCGGCCACCTGAACTTCATCGACGGCACTCCCACCTTCTCCACCGCCACTTTTGCTGTTGCTGGCAAAGGGTTCATTGGGAAGGACATGGGGTTCATCAACACGGCCGGTCCAGCCAAGCACCAGGCTGTTGCCTTCCGGTCAGGCTCCGACCTTTCCGTGATGTCCGGATGTTCATTTGATGGCTATCAAGACACACTCTACGCCCATTCAAACCGGCAATTCTACCGAGACTGCGACATCACTGGCACCATCGACTTCATGTTCGGCAACGCCGCCGTGGTGTTCCAGAACTGCAACATCCGGCCGAGGCAGCCACTTCCCAACCAGTTTAACACCATCACAGCCCAAGGCAAAAAGGACATCAACCAAAACTCCGGCATTTCCATTCAGAAATGCACTTTTTCGGCCTACAACGACAGTCTAACCGCCCCCACTTACCTGGGTCGGCCATGGAAGGAGTTTTCCACCACGGTGATTATGCAGTCGGACATCGGAGCATTCCTGCAGCCCGTGGGGTGGAAGGAATGGGTCAGCGGGCAGGACCCACCCAGCAGCATATTTTATGGGGAGTATCAGAATACTGGGCCTGGATCCAGCGTGGACAAGAGGGTTAGATGGGCCGGTTACAGGCCCAGTCTTACGGACGCCGAGGCCGGAAAGTTCACTGTCAGGACCTTCCTGAACGGCGAGGATTGGTTGCCGGCCACCAGTGTAAAGTTTGATACATCCTTGTGA 1731 51.07 MDTVKSFKGYGKVDELEQQAFRQKTRRRLIILLLSILLLIALVIGAVVGIVIHKRNSSSSSPTSSAPPTELTPAASLKTLCSVTQYPSSCQSSLQNSNTTDPVFLFKLSLRVATDSLSKLSDYTSTLNSNTRDPKVKAAIEICRSVFEDAIDTLNDTVSSMEVDHHSEKFLSPSRIEDLKTWLSTTITDQETCLDAVRDLNQTTLLQNLQTAMANSTEFTSNSLAIVTKILGLLADFNIPIHRKLMGLPEWLSSGDRRLLQENNVTAHMTVSKDGKGHYTTIKDAVAAVPKKSKERFIIHVKEGIYEENVILDKNKWNVMMYGDGRTKTIVSGHLNFIDGTPTFSTATFAVAGKGFIGKDMGFINTAGPAKHQAVAFRSGSDLSVMSGCSFDGYQDTLYAHSNRQFYRDCDITGTIDFMFGNAAVVFQNCNIRPRQPLPNQFNTITAQGKKDINQNSGISIQKCTFSAYNDSLTAPTYLGRPWKEFSTTVIMQSDIGAFLQPVGWKEWVSGQDPPSSIFYGEYQNTGPGSSVDKRVRWAGYRPSLTDAEAGKFTVRTFLNGEDWLPATSVKFDTSL 576
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 25788586 25790770 - CaPI482276_07g011310.1 Cam07g1131 131424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam07g1131 576 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 77 231 IPR035513 -
Cam07g1131 576 Gene3D - 262 576 IPR012334 -
Cam07g1131 576 Pfam Pectinesterase 269 561 IPR000070 GO:0030599(InterPro)|GO:0042545(InterPro)
Cam07g1131 576 Gene3D Invertase/pectin methylesterase inhibitor family protein 75 231 IPR035513 -
Cam07g1131 576 PANTHER PECTINESTERASE 29 567 - GO:0030599(PANTHER)|GO:0046910(PANTHER)
Cam07g1131 576 Pfam Plant invertase/pectin methylesterase inhibitor 76 226 IPR006501 GO:0004857(InterPro)
Cam07g1131 576 FunFam Pectinesterase 262 576 - -
Cam07g1131 576 FunFam Pectinesterase 74 231 - -
Cam07g1131 576 SUPERFAMILY Pectin lyase-like 266 572 IPR011050 -
Cam07g1131 576 NCBIfam pectinesterase inhibitor domain 57 230 IPR006501 GO:0004857(InterPro)
Cam07g1131 576 SMART PMEI_2 72 226 IPR006501 GO:0004857(InterPro)
Cam07g1131 576 CDD PMEI-like_3 79 230 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam06g0495 Cam-Chr6:7060431 Cam07g1131 Cam-Chr7:25788586 8.70E-114 dispersed
Cam07g1131 Cam-Chr7:25788586 Cam10g0006 Cam-Chr10:1694674 3.20E-108 dispersed
Cam07g1131 Cam-Chr7:25788586 Cam07g1132 Cam-Chr7:25796540 1.30E-101 tandem
Cam03g0823 Cam-Chr3:9670339 Cam07g1131 Cam-Chr7:25788586 1.20E-123 transposed
Cam04g1278 Cam-Chr4:26641294 Cam07g1131 Cam-Chr7:25788586 1.10E-20 transposed
Cam07g1131 Cam-Chr7:25788586 Cam09g0139 Cam-Chr9:2188255 2.20E-109 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam07g1131 - - - 0.0