Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam07g1132 ATGGCACAAACCGACGACTGCGCCGTCACCGGATTTTTGTTCTCCGGCAGCCCCATTTCCATTTCCAACATAAAAATCAAGCTGTTGGTGTTAGCCGTGTGGGCTGCGCTTGTCCTGACGGGCGTCTCCTTCGACGAGCACGTGAGAAGCACGTGCGCCATGACGCTTTACCCGGAGCTTTGCGAGACGACGATATCGAGCGGAGTGGGAAGTAAGAGTTCAAAAGAGGCAATCGAATCGTCGGTGAATATTACGATTGGCGCAGTGAAGGATAACTATAAAAGGATCAAGAAATTGGTTAAGACAGGAAAGAATCTGAGAAAGCGAGAGAAGATTGCTCTCAATGACTGTCTAGAAACAGGGGAGGAGACGCTGAGAGAGCTGTATGAGGTTGTTGATGATCTCCATGAATATCCTAATAAGAAATCTCTCTCACAATACGCCGATGACCTCAAAACCTTCCTCAGTTCCGCCATTACGAATCAGGAGACATGCGTGGACGGATTCTCACACGACAAAGCCGACAAGAAGGTACGAGAGTCATTAGAAGCAGGCCTGATTCACGTCGAAAAGCTTTGTAGCGTTGCTTTAGCCTTGATTAAGAATCTAACCGACACCGACATTGCCAATCACAACAACAACCTCATCAATAGAAACCAGCTCACGGAGATCAACAATGGACGCGACCACGACGGAATTAACTGGCCCCATTGGATGTCGCCTGGCGACCGAAGGCTTTTGCAGGCGTCGTCCACCGCCACTCCCGATGTGGTAGTGGCAGCCGATGGAAGTGGCAATTTCCGAACGGTGTCGGAGGCGGTTGCGGCGGCGCCGAATAGAAGTAGCCGGAGGTATATAATAAGAATAAAGGCAGGGGTTTATAGAGAAAATGTGAATGTGCCGAGTAGTAAGACGAATATAATGTTTTGGGGAGATGGAAGAACCACCACTATAATCACCGGGAACAGAAATGTCGTCGATGGCAGTACCACCTTCAACTCCGCCACCGTCGCGGCAGTGGGAGAAAGGTTCTTGGCGAGAGACATTACGTTTCAGAACACCGCCGGTCCATCGAAGCACCAAGCGGTGGCTCTCCGCGTCGGCTCCGACCTCTCTGCTTTTTACCGCTGCGACATGCTCGCTTATCAAGACACACTCTACGTCCACTCCAACCGCCAATTCTACGTCAAATGCATAATCATCGGCACCGTCGATTTCATCTTCGGCAACGCCGCCGCCGTCATCCAAGACTGCGACATCCATGCTCGCCGCCCCAATCCCGGGCAGAGGAACATGGTGACTGCACAAGGAAGAACAGACCCAAATCAAAACACTGGGATTGTCATCCAGAAATGTCGAATCGGAACCACCTCCGATTTGCAGCCGGTGATCAGTAATTTCCCAACGTTTCTGGGGCGGCCGTGGCAGAGGTACTCGAGAACGGTGGTTATGCAGACGAGCATTAGCAATGTGATCGATCCGGCAGGGTGGCATGTTTGGGATGGGAATTTTGCGCTTGATACTCTGTTTTACGCCGAGTATCAGAATAGCGGGCCCGGTGCTGATACGTCAAGGAGAGTAACGTGGAAGGGGTATAGGGTTCTTACAAGTGCGGCGGAAGCTGCGGCCTTCACGGCAGGGAATTTCATCGGCGGCGGCACCTGGCTGAGATCCACTGGATTCCCATTTTCACTTGGGCTGTAA 1704 51.7 MAQTDDCAVTGFLFSGSPISISNIKIKLLVLAVWAALVLTGVSFDEHVRSTCAMTLYPELCETTISSGVGSKSSKEAIESSVNITIGAVKDNYKRIKKLVKTGKNLRKREKIALNDCLETGEETLRELYEVVDDLHEYPNKKSLSQYADDLKTFLSSAITNQETCVDGFSHDKADKKVRESLEAGLIHVEKLCSVALALIKNLTDTDIANHNNNLINRNQLTEINNGRDHDGINWPHWMSPGDRRLLQASSTATPDVVVAADGSGNFRTVSEAVAAAPNRSSRRYIIRIKAGVYRENVNVPSSKTNIMFWGDGRTTTIITGNRNVVDGSTTFNSATVAAVGERFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSNRQFYVKCIIIGTVDFIFGNAAAVIQDCDIHARRPNPGQRNMVTAQGRTDPNQNTGIVIQKCRIGTTSDLQPVISNFPTFLGRPWQRYSRTVVMQTSISNVIDPAGWHVWDGNFALDTLFYAEYQNSGPGADTSRRVTWKGYRVLTSAAEAAAFTAGNFIGGGTWLRSTGFPFSLGL 567
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 25796540 25800070 - CaPI482276_07g011320.1 Cam07g1132 131425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam07g1132 567 NCBIfam pectinesterase inhibitor domain 44 204 IPR006501 GO:0004857(InterPro)
Cam07g1132 567 ProSitePatterns Pectinesterase signature 1. 281 300 IPR018040 -
Cam07g1132 567 SMART PMEI_2 43 199 IPR006501 GO:0004857(InterPro)
Cam07g1132 567 CDD PMEI-like_3 50 204 - -
Cam07g1132 567 Pfam Pectinesterase 256 552 IPR000070 GO:0030599(InterPro)|GO:0042545(InterPro)
Cam07g1132 567 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 46 204 IPR035513 -
Cam07g1132 567 Gene3D - 250 567 IPR012334 -
Cam07g1132 567 Pfam Plant invertase/pectin methylesterase inhibitor 48 199 IPR006501 GO:0004857(InterPro)
Cam07g1132 567 Gene3D Invertase/pectin methylesterase inhibitor family protein 44 205 IPR035513 -
Cam07g1132 567 ProSitePatterns Pectinesterase signature 2. 400 409 IPR033131 -
Cam07g1132 567 SUPERFAMILY Pectin lyase-like 250 566 IPR011050 -
Cam07g1132 567 FunFam Pectinesterase 250 567 - -
Cam07g1132 567 PANTHER PECTINESTERASE 29 558 - GO:0030599(PANTHER)|GO:0046910(PANTHER)
Cam07g1132 567 FunFam Pectinesterase 45 204 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam07g1132 Cam-Chr7:25796540 Cam09g0139 Cam-Chr9:2188255 2.60E-219 dispersed
Cam07g1131 Cam-Chr7:25788586 Cam07g1132 Cam-Chr7:25796540 1.30E-101 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam07g1132 K01051 - csv:101207996 927.932