Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam07g1140 ATGGTGAAGAAGTGGAGTTGGGGAGAGCCGTTGCTGCTAGTCAGTATCTGCATTTTGGGATGGAGGGTCAGTTTTATCAATGGAGCTACGGATCCAGGAGATGTCTCGGCTCTAAATGCCATGTATAATAGTTTAAACTCGCCTCCAATTCTAACACAATGGAGTTCAAGTGGTGGAGATCCATGTGGACAAATTTGGAAAGGCGTTACTTGCTTAAGCTCACGGGTCACAGAAATTTCATTGTCTGGTTTAGGACTTTCTGGATCACTGGGATACCAGCTCTCAAGTTTGACATCTCTAAGTAATCTAGATGTGAGTAACAACAATCTTGGACCTGACATACCTTATCAACTCCCTCAAAACTTGCAAAAACTAAACCTTGGATGGAATAACTTCAGTGGAAGCATCCCCTATTCTATTTCTCAAATGAGTTCGCTTATTTCCTTGAACATGAGCCACAACCAGCTTCAGAATCAAGTGAATGATATGTTCTGGAAGCTTTCTTCCCTGTCCATGTTGGATGTCTCTTTCAATTTTCTGTCAGGTGCCCTCCCCCAGAGTTTTAGCAACCTTACCAGTCTGAACACAATGTTTCTGCAAAACAACCAATTCAGTGGCACTATTGATGTTCTTGCAAATCTTCCGCTACAAAATTTGAATGTCGAGAACAACCATTTTACTGGGTGGGTTCCTGAAAGATTGAAGAACATTAATATTCAGGAGGGTGGCAATTCTTGGAGTTTTGGGCTTGCACCCCCACCTCCACCTGGGACACCTCCAGCCAACCAAAATTACAGATATCACAAGGCTGGGAACAATTACAGCCCACTGAGTAGTGCTGGTGGTGGTGGCGGTAGCAATAGATCAGGAATCAGTGGTGGTGCCATTGCTGGAATTCTTATATCTGTGCTAGTGGTAGGAGCAGTACTAGCATATCTCCTTGTAAAGAGAAGACCCAAGAGGTCATCCACAGACATAGAAAAGCAAAAGCATGGGAACTTGCCTAGCATATCTCCTGCTTCAAATGAAGTGCAAGATACATTGGCAGAGATGAAACTTGTTCATACTTCATCCTCATTTGATGCAAAAGAATTGGATTCTCCTGCTTCAATCAATCTTAAACCCCCACCTATTGATCGTCATAAATCATTCGACGACAATGATACATCAAAGGTACCTGTGGTGAAGAAGACCAATGTCACTCCTCCGATAAGTGTGAAATCATATTCAATAGCAGATCTGCAAATGGCTACAGGTAGTTTCAGTGTAGAAAACCTTCTCGGTGAGGGATCACTTGGTCGTGTTTATCGGGCTCAGTTCAACGATGGGAAGGTTCTTGCCGTGAAGAAAATAGATTCAGCTGCCTTCCCTAAAGAATTGTTGGAATATTTCACGGAGATAGTTGCTAATGTATCTCAGTTGCATCATCCTAATGTAACCGAGCTAATGGGTTATTGCTCGGAGCATGGCCTGCATTTGCTACTATATGAGTTCCATAAGAATGGCTCACTACATGACTTCTTGCACATATCAGATGAATATAGCAAGCCACTGACTTGGAACTCACGTGTCAAGATTGCTTTGGGGACGGCCCGTGCTTTGGAGTACCTACATGAAGTTTGTGCCCCGTCTGTTGTTCACAGAAATATTAAGTCATCCAATATCTTACTAGATGCTGAAATGAATCCTCATCTCTCCGATTGTGGCCTGGCTAGTTTTATAACCAATCTAGATCAGGTATTAGATCAGCAGCCAGGATCTGGGTACAGTGCTCCTGAGGTTACAATGTCTGGCCAATATACATTAAAAAGCGACGTATATAGCTTTGGAGTAGTGATGTTGGAACTTCTAAGCGGACGCAAGCCATTTGATAGTTCAAGGCCAAGAGCTGAGCAATCCTTGGTTCGATGGGCTACACCTCAGCTCCATGATATTGATGCCTTGACGAAAATGGTTGATCCTGCACTTAAAGGCCTCTACCCAGTCAAGTCTCTTTCAAGATTCGCAGACGTTGTAGCTCTCTGTGTCCAGCCTGAGCCTGAATTCAGACCACCCATGTCAGAGGTGGTGGAAGCGTTGGTTCGGCTTGTGCAGAGATCCAACATGAGCAGAAGAACATTTGGAAGTGATCATGGGTCATCTTTTAGAACTGATGATCCGGGTGAACCTGATGGCGCAATCAATGAAAACTGA 2193 43.78 MVKKWSWGEPLLLVSICILGWRVSFINGATDPGDVSALNAMYNSLNSPPILTQWSSSGGDPCGQIWKGVTCLSSRVTEISLSGLGLSGSLGYQLSSLTSLSNLDVSNNNLGPDIPYQLPQNLQKLNLGWNNFSGSIPYSISQMSSLISLNMSHNQLQNQVNDMFWKLSSLSMLDVSFNFLSGALPQSFSNLTSLNTMFLQNNQFSGTIDVLANLPLQNLNVENNHFTGWVPERLKNINIQEGGNSWSFGLAPPPPPGTPPANQNYRYHKAGNNYSPLSSAGGGGGSNRSGISGGAIAGILISVLVVGAVLAYLLVKRRPKRSSTDIEKQKHGNLPSISPASNEVQDTLAEMKLVHTSSSFDAKELDSPASINLKPPPIDRHKSFDDNDTSKVPVVKKTNVTPPISVKSYSIADLQMATGSFSVENLLGEGSLGRVYRAQFNDGKVLAVKKIDSAAFPKELLEYFTEIVANVSQLHHPNVTELMGYCSEHGLHLLLYEFHKNGSLHDFLHISDEYSKPLTWNSRVKIALGTARALEYLHEVCAPSVVHRNIKSSNILLDAEMNPHLSDCGLASFITNLDQVLDQQPGSGYSAPEVTMSGQYTLKSDVYSFGVVMLELLSGRKPFDSSRPRAEQSLVRWATPQLHDIDALTKMVDPALKGLYPVKSLSRFADVVALCVQPEPEFRPPMSEVVEALVRLVQRSNMSRRTFGSDHGSSFRTDDPGEPDGAINEN 730
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 25833262 25839883 - CaPI482276_07g011400.1 Cam07g1140 131433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam07g1140 730 Gene3D Phosphorylase Kinase; domain 1 382 498 - -
Cam07g1140 730 PANTHER LEUCINE RICH REPEAT KINASE 2 296 695 IPR051420 -
Cam07g1140 730 Pfam Leucine rich repeat N-terminal domain 32 71 IPR013210 -
Cam07g1140 730 SUPERFAMILY L domain-like 30 236 - -
Cam07g1140 730 SUPERFAMILY Protein kinase-like (PK-like) 401 693 IPR011009 -
Cam07g1140 730 MobiDBLite consensus disorder prediction 365 390 - -
Cam07g1140 730 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 31 257 - -
Cam07g1140 730 Pfam Leucine rich repeat 121 178 IPR001611 GO:0005515(InterPro)
Cam07g1140 730 Gene3D Transferase(Phosphotransferase) domain 1 500 715 - -
Cam07g1140 730 ProSiteProfiles Protein kinase domain profile. 421 696 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam07g1140 730 Gene3D Ribonuclease Inhibitor 31 251 IPR032675 -
Cam07g1140 730 MobiDBLite consensus disorder prediction 321 341 - -
Cam07g1140 730 Pfam Protein tyrosine and serine/threonine kinase 423 693 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam07g1140 730 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 499 707 - -
Cam07g1140 730 CDD STKc_IRAK 427 696 - -
Cam07g1140 730 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 385 498 - -
Cam07g1140 730 SMART LRR_typ_2 143 166 IPR003591 -
Cam07g1140 730 SMART LRR_typ_2 97 121 IPR003591 -
Cam07g1140 730 SMART LRR_typ_2 167 190 IPR003591 -
Cam07g1140 730 MobiDBLite consensus disorder prediction 245 270 - -
Cam07g1140 730 MobiDBLite consensus disorder prediction 704 730 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam01g2335 Cam-Chr1:35453964 Cam07g1140 Cam-Chr7:25833262 1.00E-96 dispersed
Cam02g0136 Cam-Chr2:2464377 Cam07g1140 Cam-Chr7:25833262 1.90E-106 dispersed
Cam07g1140 Cam-Chr7:25833262 Cam10g1702 Cam-Chr10:31046819 3.20E-84 dispersed
Cam01g0991 Cam-Chr1:13669430 Cam07g1140 Cam-Chr7:25833262 1.70E-151 transposed
Cam08g0918 Cam-Chr8:14075535 Cam07g1140 Cam-Chr7:25833262 7.80E-165 transposed
Cam03g1526 Cam-Chr3:30206806 Cam07g1140 Cam-Chr7:25833262 3.30E-49 wgd
Cam07g1140 Cam-Chr7:25833262 Cam09g0143 Cam-Chr9:2246534 1.80E-212 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85318 PF07714 PK_Tyr_Ser-Thr 7.10E-41 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam07g1140 - - - 0.0