Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam07g1145 ATGCACCTTCTTCCCCGCCATTTCTTCCTACTGGTATGCTTCTCTTTCCCTATCTCTGTCGTTTTTGGCTTAACCTCAGATGGGTTGGCTTTATTGTCCCTCCAAACCCGCTGGACTACCCAAACCCCTTTTGTCCCTGTTTGGAATGCTTCTGATTCCACTCCCTGTTCTTGGGCTGGGATTGAATGTGATCAAAACCTTCTTGTCATCACCTTGAATCTCTCTTATTATGGGGTCACGGGTCAGCTTGGACCCGAAATTGCACGTTTGACCCACTTGCGTACCATTGATTTGAACACCAACGGTTTCTCTGGTGAAATTCCTTATGGGATAGGTAACTGCAGCCATTTAGAGTTCTTGGATCTTTCCCTCAACCAATTTGGTGGAGAAATTCCTCAGTCATTAACGCTCCTTAGGAACTTGACGTTTTTGAACTTCCATGACAATGTTCTAACTGGTGCAATACCCGACTCCTTATTTCAAAATCTTAATTTGCAGTATGTGTATCTTAGTGAAAACAATCTCAACGGTTCTATCCCTCCAAATGTGGGGAATTTGAGGCAACTAATTCATTTGTATCTGTATGGAAATCAGTTGTCTGGTACCATACCTTCTTCCATAGGGAATTGTAGCCAATTGGAGGATCTTTATTTGGATCAGAATCAGTTAGTTGGAATATTGCCCAACAGTCTTAACAATCTTGATAATCTTGTTAATCTGGGTGTAAGCCACAACAATCTTGAGGGTCCAATTCCTTTGGGTTCAGGCAGTTGCCAGAGTCTTGAATTTATAGATTTGTCTTTCAATGGTTATACAGGAGGTATACCAGCTGGGCTAGGCAACTGTAGTCGCCTAACAACCTTAATCATTGTCAATTCAAGTCTAACAGGTCATATTCCTTCCTCCTTTGGCCAGCTAAGTAACCTTTCGCATCTTGATCTCTCTAGAAATCAACTGTCTGGTAATATACCTCCTGAATTTGGGGCTTGCAAATCCTTGAAAGAACTGGATTTGTACGTTAACCAACTTGAGGGAGGTATCCCTAGTGAATTGGGTTTGATAAGTGGATTAGAGACCCTTCAATTGTTTTCAAACCGGTTGACTGGTGAGATTCCGATTAGCATCTGGAAGATTGCAAGTCTCCAACATATTCTTGTGTACGACAACAACCTCTCTGGGGAACTGCCCTCGATAATAACTGAACTCAAGCACCTCAAAAACATTTCTGTATTCGACAACCATTTTTCTGGAGTCATACCTCAAAGCTTGGGACTCAACAGTAGCTTAGTGCAAGTGGAGTTCACCAATAACCAGTTCACTGGTCAAATTCCACCTAATTTATGCTCTGGAAAGACACTAAAGGTGTTAAACTTAGGTTTGAATCAATTTCAAGGAAACATACCTTCTGATATAGGAACTTGTTTGACTCTTCAGAGATTGATTTTGCAAAGGAACAACCTCACAGGGGTTCTGCCACAATTTATGAGAAATCACAGCCTATCATACATCGATGCCAATGAAAATAACCTGAATGGAACAATTCCATCAAGTTTGGGAAATTGCACCCTTCTCACTTCAATTAATTTGTCAAACAACAAGCTTACAGGTCATATACCAAATGAGTTAGGCAATCTTGTGAATCTTCAAAGTTTGAAATTGTCTCACAACTTCTTAGAAGGACCTTTGCCATCTTCCCTCTCAAATTGCACCAAAATGAATACATTTGACGTAGGATTCAATTTATTGAATGGTTCTATACCCCATAGTTTGGCCAGCTGGAAAGTAATATCCACTTTGATATTAAAAGAGAATGGATTTACTGGAGGCCTCCCGAATGTATTATCAGAACTTCAAAGCCTTTTACTACTAGATCTTGGTGGCAATTTGTTTGGAGGTGAAATTCCTTCAAATATTGGAGATTTACAGAATCTATTTTATTCCTTGAATCTAAGTAACAATGGGTTAACTGGTCAACTACCTTCTGAGCTCGCGAGTCTGATCAAGCTAGAGGGGTTGGATTTATCTCACAATAATTTGACTGGAAGTCTTAGTGTTCTTGGTGAACTTAGTTCATCATTAATGGACCTTGACATTTCAGATAATTTCTTTACAGGTCCTGTGCCGCAAACATTAATGAAGTTACTGAAGTCTCATCCCTCATCGTTCTTTGGTAACCCTGGGCTGTGCATTAGCTGTGATGAACTAGATGGCTTAAGTTGCAATAGAAATATCAGTATCAATCCTTGTGCTACTCATTCAAGCTCGCGTGGTAGCTCTCGTCTTGGCAAAGTACAGATTGCAATGATAGCTCTTGGGTCTTCACTCTTTATTATTCTTTTGCTTCTTGGGTTGGTTTATAAGTTTGTTTGTAGCAGAAGAAACAAGCAAAACATTGAGACTGCTGCTCAAGGAGGAACAACTTCCTTGCTTGAAAAGGTAATGGAGGCCACTGATAATCTAGATGAGCGTTTCATCATTGGGAGAGGAGCACATGGAGTTGTTTATAAGGCCTCCCTGGATTCAAATAAAATTTTTGCAGTAAAGAAGCTTACATTTATAGAACGTAAAGGGGGAAGTCGGAATATGGTTAAAGAAATTAGAACTGTCAACAACATCAAGCACCGAAACTTGATCTCTTTGGAAGATTATTGGTTAGGAAAAGACCACGGTCTATTGCTTTACAAATACTATCCGAATGGAAGCCTTTATGATGTGTTGCATGGCATGAATCCAGCTCCAGCTCTAACATGGAAAGCCCGCTATAATATAGCAATTGGTATTGGTCATGGATTGGCGTATCTCCATTACGATTGTGATCCTCCCATAATACACCGAGACATCAAACCGCATAATATACTTCTAGATTTGGAGATGGAACCTCATATCGCCGATTTTGGTCTTGCAAGGCTGTTGGATCAAACATCTGAATCAGCAACTTCATCATCTTTTGTGGGTACAATTGGCTACGTTGCACCAGAGAATGCATTTTCAGCAGCAAGGAGCAAAGCCTCAGACGTGTACAGCTATGGGGTGGTTTTACTCGAGCTGATAACCGGAAAGAAGCCATCAGATCCATCATTTACGGAGGTCGGAAATATGATGGCTTGGGTTCGATCGGTTTGGAATGAGACAGGTGAAATAGATAGAATTGTTGATTCAAGACTTGTGGAAGAACTTAGTAATTTTGATCATAGGGAGCAGATGAAGCAGGTGCTTCTTGTGGCTTTGCGATGCACAGAAAAGGAGCCTAACAGGAGACCGAGAATGAGAGATATTGTGGACCACTTGATTGATTCAAAGACGAGCCATTACAGCAAGCATGGCTAA 3327 40.73 MHLLPRHFFLLVCFSFPISVVFGLTSDGLALLSLQTRWTTQTPFVPVWNASDSTPCSWAGIECDQNLLVITLNLSYYGVTGQLGPEIARLTHLRTIDLNTNGFSGEIPYGIGNCSHLEFLDLSLNQFGGEIPQSLTLLRNLTFLNFHDNVLTGAIPDSLFQNLNLQYVYLSENNLNGSIPPNVGNLRQLIHLYLYGNQLSGTIPSSIGNCSQLEDLYLDQNQLVGILPNSLNNLDNLVNLGVSHNNLEGPIPLGSGSCQSLEFIDLSFNGYTGGIPAGLGNCSRLTTLIIVNSSLTGHIPSSFGQLSNLSHLDLSRNQLSGNIPPEFGACKSLKELDLYVNQLEGGIPSELGLISGLETLQLFSNRLTGEIPISIWKIASLQHILVYDNNLSGELPSIITELKHLKNISVFDNHFSGVIPQSLGLNSSLVQVEFTNNQFTGQIPPNLCSGKTLKVLNLGLNQFQGNIPSDIGTCLTLQRLILQRNNLTGVLPQFMRNHSLSYIDANENNLNGTIPSSLGNCTLLTSINLSNNKLTGHIPNELGNLVNLQSLKLSHNFLEGPLPSSLSNCTKMNTFDVGFNLLNGSIPHSLASWKVISTLILKENGFTGGLPNVLSELQSLLLLDLGGNLFGGEIPSNIGDLQNLFYSLNLSNNGLTGQLPSELASLIKLEGLDLSHNNLTGSLSVLGELSSSLMDLDISDNFFTGPVPQTLMKLLKSHPSSFFGNPGLCISCDELDGLSCNRNISINPCATHSSSRGSSRLGKVQIAMIALGSSLFIILLLLGLVYKFVCSRRNKQNIETAAQGGTTSLLEKVMEATDNLDERFIIGRGAHGVVYKASLDSNKIFAVKKLTFIERKGGSRNMVKEIRTVNNIKHRNLISLEDYWLGKDHGLLLYKYYPNGSLYDVLHGMNPAPALTWKARYNIAIGIGHGLAYLHYDCDPPIIHRDIKPHNILLDLEMEPHIADFGLARLLDQTSESATSSSFVGTIGYVAPENAFSAARSKASDVYSYGVVLLELITGKKPSDPSFTEVGNMMAWVRSVWNETGEIDRIVDSRLVEELSNFDHREQMKQVLLVALRCTEKEPNRRPRMRDIVDHLIDSKTSHYSKHG 1108
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 25883124 25886550 + CaPI482276_07g011450.1 Cam07g1145 131438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam07g1145 1108 SUPERFAMILY RNI-like 351 700 - -
Cam07g1145 1108 Gene3D Ribonuclease Inhibitor 353 428 IPR032675 -
Cam07g1145 1108 Gene3D Transferase(Phosphotransferase) domain 1 897 1107 - -
Cam07g1145 1108 PRINTS Leucine-rich repeat signature 309 322 - -
Cam07g1145 1108 PRINTS Leucine-rich repeat signature 666 679 - -
Cam07g1145 1108 Gene3D Phosphorylase Kinase; domain 1 785 896 - -
Cam07g1145 1108 SUPERFAMILY Protein kinase-like (PK-like) 803 1096 IPR011009 -
Cam07g1145 1108 ProSitePatterns Protein kinases ATP-binding region signature. 826 849 IPR017441 GO:0005524(InterPro)
Cam07g1145 1108 Gene3D Ribonuclease Inhibitor 187 352 IPR032675 -
Cam07g1145 1108 FunFam Leucine-rich repeat receptor-like kinase 28 138 - -
Cam07g1145 1108 SMART LRR_typ_2 138 162 IPR003591 -
Cam07g1145 1108 SMART LRR_typ_2 211 233 IPR003591 -
Cam07g1145 1108 SMART LRR_typ_2 306 330 IPR003591 -
Cam07g1145 1108 SMART LRR_typ_2 617 641 IPR003591 -
Cam07g1145 1108 SMART LRR_typ_2 90 114 IPR003591 -
Cam07g1145 1108 SMART LRR_typ_2 186 210 IPR003591 -
Cam07g1145 1108 SMART LRR_typ_2 545 569 IPR003591 -
Cam07g1145 1108 SMART LRR_typ_2 666 689 IPR003591 -
Cam07g1145 1108 ProSiteProfiles Protein kinase domain profile. 820 1098 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam07g1145 1108 SMART serkin_6 820 1097 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam07g1145 1108 Pfam Leucine Rich Repeat 668 683 IPR001611 GO:0005515(InterPro)
Cam07g1145 1108 Pfam Leucine Rich Repeat 116 136 IPR001611 GO:0005515(InterPro)
Cam07g1145 1108 Pfam Leucine Rich Repeat 647 666 IPR001611 GO:0005515(InterPro)
Cam07g1145 1108 Pfam Leucine Rich Repeat 189 210 IPR001611 GO:0005515(InterPro)
Cam07g1145 1108 Pfam Leucine Rich Repeat 92 114 IPR001611 GO:0005515(InterPro)
Cam07g1145 1108 Pfam Leucine Rich Repeat 164 186 IPR001611 GO:0005515(InterPro)
Cam07g1145 1108 Pfam Leucine Rich Repeat 499 521 IPR001611 GO:0005515(InterPro)
Cam07g1145 1108 Pfam Leucine Rich Repeat 260 282 IPR001611 GO:0005515(InterPro)
Cam07g1145 1108 Pfam Leucine Rich Repeat 212 234 IPR001611 GO:0005515(InterPro)
Cam07g1145 1108 Pfam Leucine Rich Repeat 524 545 IPR001611 GO:0005515(InterPro)
Cam07g1145 1108 Pfam Leucine Rich Repeat 547 569 IPR001611 GO:0005515(InterPro)
Cam07g1145 1108 Gene3D Ribonuclease Inhibitor 593 735 IPR032675 -
Cam07g1145 1108 Gene3D Ribonuclease Inhibitor 25 182 IPR032675 -
Cam07g1145 1108 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 785 896 - -
Cam07g1145 1108 Pfam Leucine rich repeat N-terminal domain 25 64 IPR013210 -
Cam07g1145 1108 Pfam Leucine rich repeat 283 343 IPR001611 GO:0005515(InterPro)
Cam07g1145 1108 FunFam Serine/threonine-protein kinase-like protein CCR4 897 1108 - -
Cam07g1145 1108 ProSiteProfiles Leucine-rich repeat profile. 668 690 IPR001611 GO:0005515(InterPro)
Cam07g1145 1108 Gene3D Ribonuclease Inhibitor 429 496 IPR032675 -
Cam07g1145 1108 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 331 423 - -
Cam07g1145 1108 FunFam Leucine-rich repeat receptor protein kinase EMS1 253 330 - -
Cam07g1145 1108 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 638 1096 IPR050647 -
Cam07g1145 1108 Gene3D Ribonuclease Inhibitor 497 592 IPR032675 -
Cam07g1145 1108 FunFam Leucine-rich repeat receptor-like protein kinase PEPR1 451 737 - -
Cam07g1145 1108 SUPERFAMILY RNI-like 72 439 - -
Cam07g1145 1108 FunFam Leucine-rich receptor-like protein kinase family protein 155 252 - -
Cam07g1145 1108 Pfam Protein kinase domain 825 1095 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam07g1145 1108 ProSitePatterns Serine/Threonine protein kinases active-site signature. 942 954 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam07g1145 Cam-Chr7:25883124 Cam07g1697 Cam-Chr7:31705775 6.30E-60 dispersed
Cam07g1144 Cam-Chr7:25867301 Cam07g1145 Cam-Chr7:25883124 4.20E-25 tandem
Cam07g1145 Cam-Chr7:25883124 Cam07g1146 Cam-Chr7:25890656 1.40E-35 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85321 PF00069 Pkinase 1.40E-45 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam07g1145 K28089 - csv:101204561 1793.09