Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam07g1177 ATGATGGAAGAGATGTCTCCTGCTGTTTCTTTGACCCTTAGTTTGGGTAATCCAAAGTCTGATAGCTCAGTAAATCCTGGTCATGTCGAATTCACACGGCTAAAGTTAGTGACGGACACAGTAAATTTATTCTCTGCATCGTCCCCTGAGTCAGGTTCTATTGGTAATGGTAGTTGCCATGATTTTAATGGTATAGTTGACAGCATAACTGTGTCACAACCGACTGATAATGGTCAAGGTATCGACAGTTTTTGGGGGTTGTTACCGAAGAATGGCACGAATTTGACCGTAGATAAGGAAGGTGCATCCTTAGCTACTCTGGATGACCCTGATGAAATGATAGACGATGGGTTGTTTGCTATTGATGGCGGTTCAAGTATTAATGTGCAAGAAGTTGTCAAAATTGGAGATGTTGCTAATGGTCATATTGTTGCAAAGGCTATCATCTTGGTGGAATCAGGGAAGATGCCTACTAGTGAACTTATTGTGGCGACAGTAAGCCCAGATTTAGAAGTATCTGCATCGTCAGAGCTAAACGTCCCTGCAGTACTTTTCCAATCGAAAGGGGGGGATAGTGTTCATAAAGGCATTCGTAGTGTCTTTGAACGCGATTGTATCCCCCTTTGGGGGTCCGTATCAATTTGTGGTAGAAGACCAGAAATGGAAGATGCAATTGCTGCCGTTCCTTGTTTTGCAAAGATTCCTATCAAAATGCTTGTAGGAAATGGTATGCTGAATGGAATGGGTCAAAGTTTAACACATCTCAACAGCCATTTTTTTGGTGTTTATGATGGACATGGGGGCCCTCAGGTTGCTGATTATTGTCGAGAGCGTATACACTTGGCACTAGCTGAAGAGATAAGCGGATTCAAACAAAATCAAAATAATGGAAGCAATGGAGAAAACTGGCAGCAGGATTGGGAGAGAACCTTTTACAATTGTTTTCTTAGGGTTGATGATGAAATAGAAGGAAAAGTTGGTAGAACAGTCCGTGGGAGTGGTGGAGATGTTTCCGATACAAGCTTCGAGCCTGTTGCCCCGGAAACTGTTGGCTCTACGGCTGTTGTTGCATTGGTATGTTCATCACACATCATAGTTGCAAACTGTGGTGATTCAAGAGCAGTCCTATGCCGTGGTAAAGAACCCATGGCTCTATCGGTCGATCACAAACCAAATCGCGAAGATGAATTCACTAGGATTGAATCATCTGGAGGCAAGGTCATCCAGTGGAATGGACATCGCGTGTTTGGAGTTCTTGCAATGTCAAGATCCATTGGTGATAGATATTTGAAGCCATGGATTATTCCTGATCCAGAAGTCATGTTCGTTCCTCGTGCGAAAGAAGACGAATGTCTTATTTTAGCCAGTGATGGACTGTGGGATGTGATGACAAATGAGGAAGTCTGTGAAATAGCTCGAAGGCGGATTCTGCTTTGGCACAAGAAACACGGGGCTTCGTCTCTTGCCGATCGGGGCACAGGAGTTGACCCAGCTGCTCAAGCTGCAGCAGATTACCTCTCAATGCTTGCTCTCCAAAAGGGAAGCAAGGACAACATCTCTGTCATTGTAGTGGACTTGAAAGCTCAAAGGAAGTTCAAGACCAAATCTTGA 1611 44.01 MMEEMSPAVSLTLSLGNPKSDSSVNPGHVEFTRLKLVTDTVNLFSASSPESGSIGNGSCHDFNGIVDSITVSQPTDNGQGIDSFWGLLPKNGTNLTVDKEGASLATLDDPDEMIDDGLFAIDGGSSINVQEVVKIGDVANGHIVAKAIILVESGKMPTSELIVATVSPDLEVSASSELNVPAVLFQSKGGDSVHKGIRSVFERDCIPLWGSVSICGRRPEMEDAIAAVPCFAKIPIKMLVGNGMLNGMGQSLTHLNSHFFGVYDGHGGPQVADYCRERIHLALAEEISGFKQNQNNGSNGENWQQDWERTFYNCFLRVDDEIEGKVGRTVRGSGGDVSDTSFEPVAPETVGSTAVVALVCSSHIIVANCGDSRAVLCRGKEPMALSVDHKPNREDEFTRIESSGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPDPEVMFVPRAKEDECLILASDGLWDVMTNEEVCEIARRRILLWHKKHGASSLADRGTGVDPAAQAAADYLSMLALQKGSKDNISVIVVDLKAQRKFKTKS 536
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 26154272 26156441 + CaPI482276_07g011770.1 Cam07g1177 131470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam07g1177 536 ProSitePatterns PPM-type phosphatase domain signature. 259 267 IPR000222 GO:0043169(InterPro)
Cam07g1177 536 CDD PP2Cc 210 526 IPR001932 -
Cam07g1177 536 SMART PP2C_4 198 524 IPR001932 -
Cam07g1177 536 FunFam Protein phosphatase 2C 16 196 536 - -
Cam07g1177 536 Gene3D - 195 536 IPR036457 -
Cam07g1177 536 ProSiteProfiles PPM-type phosphatase domain profile. 208 526 IPR001932 -
Cam07g1177 536 PANTHER PROTEIN PHOSPHATASE 181 525 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0005634(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Cam07g1177 536 MobiDBLite consensus disorder prediction 10 24 - -
Cam07g1177 536 SUPERFAMILY PP2C-like 200 527 IPR036457 -
Cam07g1177 536 MobiDBLite consensus disorder prediction 1 24 - -
Cam07g1177 536 Pfam Protein phosphatase 2C 236 519 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam03g1633 Cam-Chr3:31327692 Cam07g1177 Cam-Chr7:26154272 4.50E-74 dispersed
Cam05g1049 Cam-Chr5:9518755 Cam07g1177 Cam-Chr7:26154272 7.60E-59 dispersed
Cam07g1177 Cam-Chr7:26154272 Cam08g1452 Cam-Chr8:20806036 2.00E-144 dispersed
Cam07g1177 Cam-Chr7:26154272 Cam03g0118 Cam-Chr3:2108061 1.80E-65 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam07g1177 K14497 - csv:101203499 1010.36