Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam07g1218 ATGGCAACTCTCCAATTCTTCCTTCTCATTTTTCTTTCCAGTTTCGCTCTCTTTCATTTCGTCTCTGCAGAGAATCCTTCAGGTTTCATCAGTTTAGACTGTGGACTTCCGGCGAACTTCACATACACAGAGCCAAACACCGGAATAATCTACGAATCCGATGCGGCGTTCATAAATTCTGGTGAAATCCACAACGTTTCCGCTGATAACATAAAGAATGGCTTGAAACAGCCGATGTGGAGTCTGAGGAGCTTTCCGGAAGGAATTAGGAATTGTTACAAATTGAAAGTGAGGAACGGGACGAAGTATTTGATTCGAGCGGCTTTTTGGTACGGAAATTACGATGGTAAAAGGAATTCGCCTGGATTTGATCTGTATTTCGGAGCAAATTTTTGGGACTCGGTTGCATTTGAAGGAAATTTTACAGTGAGGAAGGAGATTGTGCATATAGTTTCATCAAGTGATGTGCAAATTTGTGTCGTGAATGTTGGAACTGGAATTCCATTCATTTCGGCTCTGGAATTGAGGCCTCTAAAAGACTCTGTTTACGAGACTGGATCTCTGACATTAGCTAATTTCCTACGCCTCGATTTCGGCTCCCTTGATAATCAAACTATCAGGTATCAAGACGACGTCTACGATCGAATCTGGGATCCACCAGTTCCCATTCGAGGATGGACAACCTTAAACACTTCGGAGAAAGTTTCCGTGGACGATCCGCTCTTCTTCCAACCGGCTCCGGCGGTCATGAACACGGCGGCGACACCGAGTAACGAAAGCGCTCCGATGGCGTTCACTTGGCTGCCACCGGATTCGACGACGGCGTTTTTCGTGTACATGTACTTTGCGGAGCTGAAGGTGCTTGGAGCGAATGAGTCGAGAGTGTTCGACGTATTTCTGAACGGAAAACGATGGATTAATGAATCGCTTTCTCCCAGCTATTTAGCGGAATTGGCGTTTTACAGTACCACGCCTCTGACCGGCGGAACCTACCAGATCTCCTTCGTCAGAACTCCCAATTCAACTCTTCCTCCCATTCTCAATGCCCTTGAGATTTATCGAGTTCTTAATTTATCGCTATCCGAGACCAGTGGGCAAGATGTTGTCGCCATTGAAAACATCAAGGCAATTTATGGAGTTAAAAGAAACTGGCAAGGAGATCCCTGTGCCCCAAAGGACTTCATTTGGGAAGGACTCAACTGTAGCTTTTTGAATTCTGAGCCTCCCAGAATCATATCCTTGGATTTGTCCTCAAGTGGACTGACAGGGGAAATACCTCGAGAGATAGCAAATCTTAAAATGCTGGAGTCTTTAGATCTATCAAACAATAATTTGAGTGGACCAGTGCCTGATTTTCTCACTCAATTGCCATCCTTGCGAGTTCTAAACTTGGAAAGAAACAAGCTTTCAGGACTAATTCCGGCCCAGCTCGTAGAGAAGTCCAATAATGGCTCTCTGACATTAAGATTTCGTGATAATCCAAATCTGTTTACTACGCCTGAAAGGAGAAAGAAGCAAAGCAATGTTGTTGTTCCTGTAGTAGCATCAGTTGTTGCATTTCTTCTGCTTTCGTTCTTAATTGCAGCGGCTATCTTTTGGAAGACAAAAAGAAGAAAATCAAAAGGAGCCGAAATTAGAGTGGTGAAACAAACTGTTGATCAATCTCAAAATTGGGACACAGCCAAGAGATGTTATTCATACTCAGATGTCCTAAGAATGACAAACAATTTCGAGCGTATGCTTGGAGAAGGCGGCTTTGGAAGAGTTTACTATGGAAAAATTGAGAACGCTGAAGTAGCTGTAAAAATGCTATCTCCTCAATCAGTTCAAGGCTATCAACAATTTCAAGCAGAGGTTGAGCTTCTTATGAGGGTTCACCATAGAAACTTGACTGGTCTTGTTGGGTATTGCAATGAACCAGCCTACAAAGGACTTATCTACGAGTACATGGCCAGAGGGAACTTAGGATCTCTCATGTCAGATGGCAAGTCAGCTTTGTTGAACTGGGAAGTCAGACTTCATATAGCAGTGGATGCAGCACAAGGATTGCAATACTTGCATTCTGGTATAAAGCCAGCTATTGTACATAGAGATGTAAAATCTTCCAACATCTTATTGGATGACAACTTTCAAGCAAAAGTATCTGATTTTGGCTTGTCGAGAATTTTTCCCATCGACGATGGTGCCACTCATGTGACAACCAATGTGGTTGGCACTCCTGGTTACCTCGACCCTGAATACTACACATCTTATAGATTAAACGAAAAAAGCGACGTGTATGGCTTCGGAATTGTTCTTCTAGAAATCATAACTGGGAGACCAGTTTTGACAAAGACTCAAGACAAGGTAACTCACATCTATCAATGGGTCGACTCAATGGTTTCTCAAGGTGATATCAGCTCCATCATCGATCCGAAATTGAAAGAAGATTTCGAGGTGAACACCATTTGGAAGGCGGTTGAAATAGCGATGTCGTGCACATCTCCCATGTCTACAAATAGGCCAACTATGAGCCAAGTTGTGATACAATTGAATGAATGTTTGAATATGGAGTTAGCTCACAGTAATAACAATCATCAACCTGAATCTGTAGTTGAAGATCATGTTTCTCTGTTTGGTCCAGAAGCAAGGGGGAAGATCAACGTTGATAATGAAATAATCCAAAGTAAAAGTACTTTTAACCAAG 2686 42.78 MATLQFFLLIFLSSFALFHFVSAENPSGFISLDCGLPANFTYTEPNTGIIYESDAAFINSGEIHNVSADNIKNGLKQPMWSLRSFPEGIRNCYKLKVRNGTKYLIRAAFWYGNYDGKRNSPGFDLYFGANFWDSVAFEGNFTVRKEIVHIVSSSDVQICVVNVGTGIPFISALELRPLKDSVYETGSLTLANFLRLDFGSLDNQTIRYQDDVYDRIWDPPVPIRGWTTLNTSEKVSVDDPLFFQPAPAVMNTAATPSNESAPMAFTWLPPDSTTAFFVYMYFAELKVLGANESRVFDVFLNGKRWINESLSPSYLAELAFYSTTPLTGGTYQISFVRTPNSTLPPILNALEIYRVLNLSLSETSGQDVVAIENIKAIYGVKRNWQGDPCAPKDFIWEGLNCSFLNSEPPRIISLDLSSSGLTGEIPREIANLKMLESLDLSNNNLSGPVPDFLTQLPSLRVLNLERNKLSGLIPAQLVEKSNNGSLTLRFRDNPNLFTTPERRKKQSNVVVPVVASVVAFLLLSFLIAAAIFWKTKRRKSKGAEIRVVKQTVDQSQNWDTAKRCYSYSDVLRMTNNFERMLGEGGFGRVYYGKIENAEVAVKMLSPQSVQGYQQFQAEVELLMRVHHRNLTGLVGYCNEPAYKGLIYEYMARGNLGSLMSDGKSALLNWEVRLHIAVDAAQGLQYLHSGIKPAIVHRDVKSSNILLDDNFQAKVSDFGLSRIFPIDDGATHVTTNVVGTPGYLDPEYYTSYRLNEKSDVYGFGIVLLEIITGRPVLTKTQDKVTHIYQWVDSMVSQGDISSIIDPKLKEDFEVNTIWKAVEIAMSCTSPMSTNRPTMSQVVIQLNECLNMELAHSNNNHQPESVVEDHVSLFGPEARGKINVDNEIIQSKSTFNQ 895
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 26550385 26558066 - CaPI482276_07g012180.1 Cam07g1218 131511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam07g1218 895 Gene3D Phosphorylase Kinase; domain 1 547 649 - -
Cam07g1218 895 Pfam Malectin-like domain 32 355 IPR024788 -
Cam07g1218 895 FunFam Leucine-rich repeat receptor-like protein kinase 553 649 - -
Cam07g1218 895 SMART serkin_6 575 848 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam07g1218 895 Gene3D Ribonuclease Inhibitor 370 489 IPR032675 -
Cam07g1218 895 SUPERFAMILY Protein kinase-like (PK-like) 559 844 IPR011009 -
Cam07g1218 895 PRINTS Leucine-rich repeat signature 435 448 - -
Cam07g1218 895 PRINTS Leucine-rich repeat signature 456 469 - -
Cam07g1218 895 SUPERFAMILY L domain-like 372 477 - -
Cam07g1218 895 CDD STKc_IRAK 581 846 - -
Cam07g1218 895 ProSitePatterns Serine/Threonine protein kinases active-site signature. 694 706 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam07g1218 895 FunFam Leucine-rich repeat receptor-like kinase 366 499 - -
Cam07g1218 895 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 650 857 - -
Cam07g1218 895 Gene3D Transferase(Phosphotransferase) domain 1 650 870 - -
Cam07g1218 895 ProSiteProfiles Protein kinase domain profile. 575 848 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam07g1218 895 PANTHER OS07G0107800 PROTEIN-RELATED 23 853 - -
Cam07g1218 895 Pfam Protein tyrosine and serine/threonine kinase 577 843 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam07g1218 895 ProSitePatterns Protein kinases ATP-binding region signature. 581 602 IPR017441 GO:0005524(InterPro)
Cam07g1218 895 Pfam Leucine rich repeat 413 469 IPR001611 GO:0005515(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam07g1218 Cam-Chr7:26550385 Cam09g0032 Cam-Chr9:1262582 1.00E-214 dispersed
Cam07g1217 Cam-Chr7:26541693 Cam07g1218 Cam-Chr7:26550385 1.30E-161 tandem
Cam07g1218 Cam-Chr7:26550385 Cam07g1219 Cam-Chr7:26560544 1.50E-30 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85326 PF12819 Malectin_like 8.80E-111 CL0202 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam07g1218 - - - 0.0