Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam07g1227 ATGCACAGAATCGCCGGTTCACGACTCAGGTCGCTCAAGAACCATGCGGCCAATTTGGGGGCCTCTAGATTTGCAACATCCAGTGCAGTTGCTGCAAGACCAACGTCTGGAGGGTTTTTTAGCTGGCTCACTGGAGAACGTTCAAGCTCTCTTCCCCCATTGGAAACACCACTATCTGGTATTACCCTCCCACCACCATTGCCTGATCACGTTGAACCAAGCAAGACCAAGATTACAACTCTTCCTAATGGTGTCAGAATAGCTTCAGAAACTTCTTCGAACCCTGCAGCCTCTATTGGGATATATCTTGATTGTGGTTCCATATATGAGACCCCAGTGTCTTCTGGAGCATCACATTTGCTGGAAAGGTTGGCCTTCAAGAGCACAACAAATCGAAGCCATTTGCGCATTGTTAGGGAAGTAGAAGCTATTGGTGGCAACACAGGTGCCTCTGCCTCCCGGGAGCAAATGGGATACACTTTTGATGCTTTAAAGACATATGTTCCAGAAATGGTGGAAGTGCTAGTAGACTGTGTCAGGAATCCTGTATTTTTGGATTGGGAAATCAATGAAGAGCTGCAAAAGCTAAAAGCAGAAATTGGAGAACTTGCAAATAACCCCCAGGGCTTACTTCTCGAGGCAATTCATTCTGCTGGGTATTCTGGGGCACTTGCAAATCCTCTTGTGGCTCCAGAGTTTGCATTAAGCAGATTGGATGGCACCATCTTGGAGGAATTTATTGCTGAGAACTATACTGCTCCTAGAATGGTGCTTGCAGCATCAGGGGTTGAACATGAGGAGCTTTTATCCATTGCAGAACCTCTTCTATCTGACCTACCCAAAGTACCCATTGTGAAAGTGCCGGAATCTGCATATGTTGGAGGGGATTATCGTCGTCAAGCTGACTGTGGGAGCACACATGTTGCCCTGGCTTTTGAGGTTCCTGGTGGCTGGCACAAGGAGAAAGATGCCATTGTTTTGACGGTTCTTCAGATGCTTATGGGAGGTGGTGGTTCATTTTCTGCTGGGGGCCCTGGTAAAGGCATGCACTCGAGGTTATATCTCCGTGTTTTGAATGAGTACCAGCAGATTCAATCTTTTTCTGCATTTAACAGCATCTTCAATAACACGGGACTGTTTGGAATTTATGCTAGCACTGGTTCTGACTTTGTGGCCCAAGCAGTTGATATTGCTGCATCAGAACTAATCTCAATTGCAACTCCTGGACAAGTTTCCCAGGTGCAGCTTAACCGTGCCAAAGAATCAACAAAATCTGCAGTTTTGATGAATCTAGAGTCCAGGATGATCGTGTCTGAGGATATTGGGAGGCAGATTTTGACATATGGAGAAAGGAAACCTGTAGAGCACTTCTTAAAGGCCGTAGACTCAATCACTTTGAACGATATTACTAACATTGCCCAGAAAGTTATATCTTCTCCTTTAACGATGGCATCATACGGAGACGTTATTAACGTCCCGACCTACGAGTCTGTTAACAGCAGAGAAGTGAGAGTGAAGAAACCACAACCAAAACAGAGAAGGGAAAATTTCAGAGGGAATTTCTTTGATTCATTAACTCGGCGAAGATCGAAAATGTCGTGGCAATCTTACATTGATGATCAGTTGATGTATGAGGTCGATGGCCAACATCTCAAAGCCGCTGCTATAATCGGTAACGACGGTTCTATTTGGGCTCAGAGCACCGGTTTCCCTCAGTACAAGCCAGAAGAGATTACTGCCATTATGAAGGATTTTGATGAGCCTGGATCTCTTGCTCCGACTGGGTTGCACCTTGGTGGATCGAAGTACATGGTTATCCAGGGGGAATCTGGAGCTGTTATCCGTGGAAAGAAGGGCACTTCTGGGATCACTGTAAAGAAAACAAACCAAGCACTGATTTTTGGTTTATATGATGAACCCATGACTCCAGGACAGTGCAACATGATTGTTGAGAAGTTGGGAGATTACCTGATTGATCAAGGCCTTGTGAAGAATCAGGATGAAGAGCAAGAGTGTGGTGATTTTGGTCGTTGA 2034 45.43 MHRIAGSRLRSLKNHAANLGASRFATSSAVAARPTSGGFFSWLTGERSSSLPPLETPLSGITLPPPLPDHVEPSKTKITTLPNGVRIASETSSNPAASIGIYLDCGSIYETPVSSGASHLLERLAFKSTTNRSHLRIVREVEAIGGNTGASASREQMGYTFDALKTYVPEMVEVLVDCVRNPVFLDWEINEELQKLKAEIGELANNPQGLLLEAIHSAGYSGALANPLVAPEFALSRLDGTILEEFIAENYTAPRMVLAASGVEHEELLSIAEPLLSDLPKVPIVKVPESAYVGGDYRRQADCGSTHVALAFEVPGGWHKEKDAIVLTVLQMLMGGGGSFSAGGPGKGMHSRLYLRVLNEYQQIQSFSAFNSIFNNTGLFGIYASTGSDFVAQAVDIAASELISIATPGQVSQVQLNRAKESTKSAVLMNLESRMIVSEDIGRQILTYGERKPVEHFLKAVDSITLNDITNIAQKVISSPLTMASYGDVINVPTYESVNSREVRVKKPQPKQRRENFRGNFFDSLTRRRSKMSWQSYIDDQLMYEVDGQHLKAAAIIGNDGSIWAQSTGFPQYKPEEITAIMKDFDEPGSLAPTGLHLGGSKYMVIQGESGAVIRGKKGTSGITVKKTNQALIFGLYDEPMTPGQCNMIVEKLGDYLIDQGLVKNQDEEQECGDFGR 677
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 26611933 26619733 + CaPI482276_07g012270.1 Cam07g1227 131520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam07g1227 677 SMART prof_2 532 662 IPR005455 GO:0003779(InterPro)
Cam07g1227 677 CDD PROF 533 661 IPR005455 GO:0003779(InterPro)
Cam07g1227 677 Gene3D Dynein light chain 2a, cytoplasmic 530 662 - -
Cam07g1227 677 SUPERFAMILY Profilin (actin-binding protein) 533 661 IPR036140 -
Cam07g1227 677 PRINTS Plant profilin signature 635 648 IPR005455 GO:0003779(InterPro)
Cam07g1227 677 PRINTS Plant profilin signature 532 545 IPR005455 GO:0003779(InterPro)
Cam07g1227 677 PRINTS Plant profilin signature 558 571 IPR005455 GO:0003779(InterPro)
Cam07g1227 677 PRINTS Plant profilin signature 615 630 IPR005455 GO:0003779(InterPro)
Cam07g1227 677 PRINTS Plant profilin signature 583 597 IPR005455 GO:0003779(InterPro)
Cam07g1227 677 PRINTS Plant profilin signature 602 611 IPR005455 GO:0003779(InterPro)
Cam07g1227 677 PRINTS Plant profilin signature 648 661 IPR005455 GO:0003779(InterPro)
Cam07g1227 677 Pfam Profilin 532 662 IPR048278 GO:0003779(InterPro)
Cam07g1227 677 ProSitePatterns Insulinase family, zinc-binding region signature. 106 129 IPR001431 GO:0004222(InterPro)|GO:0006508(InterPro)
Cam07g1227 677 Gene3D - 290 504 - -
Cam07g1227 677 SUPERFAMILY LuxS/MPP-like metallohydrolase 292 496 IPR011249 GO:0046872(InterPro)
Cam07g1227 677 FunFam Mitochondrial-processing peptidase subunit beta 66 281 - -
Cam07g1227 677 FunFam Profilin 532 662 - -
Cam07g1227 677 Pfam Peptidase M16 inactive domain 243 421 IPR007863 -
Cam07g1227 677 PANTHER METALLOPROTEASE 72 496 IPR050361 GO:0005739(PANTHER)
Cam07g1227 677 Gene3D - 67 278 - -
Cam07g1227 677 FunFam mitochondrial-processing peptidase subunit alpha 290 498 - -
Cam07g1227 677 PRINTS Profilin signature 644 661 IPR005455 GO:0003779(InterPro)
Cam07g1227 677 PRINTS Profilin signature 571 591 IPR005455 GO:0003779(InterPro)
Cam07g1227 677 PRINTS Profilin signature 552 561 IPR005455 GO:0003779(InterPro)
Cam07g1227 677 PRINTS Profilin signature 631 644 IPR005455 GO:0003779(InterPro)
Cam07g1227 677 PRINTS Profilin signature 534 543 IPR005455 GO:0003779(InterPro)
Cam07g1227 677 PRINTS Profilin signature 595 609 IPR005455 GO:0003779(InterPro)
Cam07g1227 677 SUPERFAMILY LuxS/MPP-like metallohydrolase 75 284 IPR011249 GO:0046872(InterPro)
Cam07g1227 677 Pfam Insulinase (Peptidase family M16) 86 231 IPR011765 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam07g1227 Cam-Chr7:26611933 Cam11g0212 Cam-Chr11:3658864 1.90E-59 dispersed
Cam07g0749 Cam-Chr7:17912875 Cam07g1227 Cam-Chr7:26611933 1.60E-53 transposed
Cam11g0205 Cam-Chr11:3588999 Cam07g1227 Cam-Chr7:26611933 1.40E-208 transposed
Cam07g1227 Cam-Chr7:26611933 Cam09g0024 Cam-Chr9:1200515 1.50E-56 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam07g1227 K01412 - csv:101217854 934.865