Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cam07g1227 | ATGCACAGAATCGCCGGTTCACGACTCAGGTCGCTCAAGAACCATGCGGCCAATTTGGGGGCCTCTAGATTTGCAACATCCAGTGCAGTTGCTGCAAGACCAACGTCTGGAGGGTTTTTTAGCTGGCTCACTGGAGAACGTTCAAGCTCTCTTCCCCCATTGGAAACACCACTATCTGGTATTACCCTCCCACCACCATTGCCTGATCACGTTGAACCAAGCAAGACCAAGATTACAACTCTTCCTAATGGTGTCAGAATAGCTTCAGAAACTTCTTCGAACCCTGCAGCCTCTATTGGGATATATCTTGATTGTGGTTCCATATATGAGACCCCAGTGTCTTCTGGAGCATCACATTTGCTGGAAAGGTTGGCCTTCAAGAGCACAACAAATCGAAGCCATTTGCGCATTGTTAGGGAAGTAGAAGCTATTGGTGGCAACACAGGTGCCTCTGCCTCCCGGGAGCAAATGGGATACACTTTTGATGCTTTAAAGACATATGTTCCAGAAATGGTGGAAGTGCTAGTAGACTGTGTCAGGAATCCTGTATTTTTGGATTGGGAAATCAATGAAGAGCTGCAAAAGCTAAAAGCAGAAATTGGAGAACTTGCAAATAACCCCCAGGGCTTACTTCTCGAGGCAATTCATTCTGCTGGGTATTCTGGGGCACTTGCAAATCCTCTTGTGGCTCCAGAGTTTGCATTAAGCAGATTGGATGGCACCATCTTGGAGGAATTTATTGCTGAGAACTATACTGCTCCTAGAATGGTGCTTGCAGCATCAGGGGTTGAACATGAGGAGCTTTTATCCATTGCAGAACCTCTTCTATCTGACCTACCCAAAGTACCCATTGTGAAAGTGCCGGAATCTGCATATGTTGGAGGGGATTATCGTCGTCAAGCTGACTGTGGGAGCACACATGTTGCCCTGGCTTTTGAGGTTCCTGGTGGCTGGCACAAGGAGAAAGATGCCATTGTTTTGACGGTTCTTCAGATGCTTATGGGAGGTGGTGGTTCATTTTCTGCTGGGGGCCCTGGTAAAGGCATGCACTCGAGGTTATATCTCCGTGTTTTGAATGAGTACCAGCAGATTCAATCTTTTTCTGCATTTAACAGCATCTTCAATAACACGGGACTGTTTGGAATTTATGCTAGCACTGGTTCTGACTTTGTGGCCCAAGCAGTTGATATTGCTGCATCAGAACTAATCTCAATTGCAACTCCTGGACAAGTTTCCCAGGTGCAGCTTAACCGTGCCAAAGAATCAACAAAATCTGCAGTTTTGATGAATCTAGAGTCCAGGATGATCGTGTCTGAGGATATTGGGAGGCAGATTTTGACATATGGAGAAAGGAAACCTGTAGAGCACTTCTTAAAGGCCGTAGACTCAATCACTTTGAACGATATTACTAACATTGCCCAGAAAGTTATATCTTCTCCTTTAACGATGGCATCATACGGAGACGTTATTAACGTCCCGACCTACGAGTCTGTTAACAGCAGAGAAGTGAGAGTGAAGAAACCACAACCAAAACAGAGAAGGGAAAATTTCAGAGGGAATTTCTTTGATTCATTAACTCGGCGAAGATCGAAAATGTCGTGGCAATCTTACATTGATGATCAGTTGATGTATGAGGTCGATGGCCAACATCTCAAAGCCGCTGCTATAATCGGTAACGACGGTTCTATTTGGGCTCAGAGCACCGGTTTCCCTCAGTACAAGCCAGAAGAGATTACTGCCATTATGAAGGATTTTGATGAGCCTGGATCTCTTGCTCCGACTGGGTTGCACCTTGGTGGATCGAAGTACATGGTTATCCAGGGGGAATCTGGAGCTGTTATCCGTGGAAAGAAGGGCACTTCTGGGATCACTGTAAAGAAAACAAACCAAGCACTGATTTTTGGTTTATATGATGAACCCATGACTCCAGGACAGTGCAACATGATTGTTGAGAAGTTGGGAGATTACCTGATTGATCAAGGCCTTGTGAAGAATCAGGATGAAGAGCAAGAGTGTGGTGATTTTGGTCGTTGA | 2034 | 45.43 | MHRIAGSRLRSLKNHAANLGASRFATSSAVAARPTSGGFFSWLTGERSSSLPPLETPLSGITLPPPLPDHVEPSKTKITTLPNGVRIASETSSNPAASIGIYLDCGSIYETPVSSGASHLLERLAFKSTTNRSHLRIVREVEAIGGNTGASASREQMGYTFDALKTYVPEMVEVLVDCVRNPVFLDWEINEELQKLKAEIGELANNPQGLLLEAIHSAGYSGALANPLVAPEFALSRLDGTILEEFIAENYTAPRMVLAASGVEHEELLSIAEPLLSDLPKVPIVKVPESAYVGGDYRRQADCGSTHVALAFEVPGGWHKEKDAIVLTVLQMLMGGGGSFSAGGPGKGMHSRLYLRVLNEYQQIQSFSAFNSIFNNTGLFGIYASTGSDFVAQAVDIAASELISIATPGQVSQVQLNRAKESTKSAVLMNLESRMIVSEDIGRQILTYGERKPVEHFLKAVDSITLNDITNIAQKVISSPLTMASYGDVINVPTYESVNSREVRVKKPQPKQRRENFRGNFFDSLTRRRSKMSWQSYIDDQLMYEVDGQHLKAAAIIGNDGSIWAQSTGFPQYKPEEITAIMKDFDEPGSLAPTGLHLGGSKYMVIQGESGAVIRGKKGTSGITVKKTNQALIFGLYDEPMTPGQCNMIVEKLGDYLIDQGLVKNQDEEQECGDFGR | 677 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 26611933 | 26619733 | + | CaPI482276_07g012270.1 | Cam07g1227 | 131520 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cam07g1227 | 677 | SMART | prof_2 | 532 | 662 | IPR005455 | GO:0003779(InterPro) | |
Cam07g1227 | 677 | CDD | PROF | 533 | 661 | IPR005455 | GO:0003779(InterPro) | |
Cam07g1227 | 677 | Gene3D | Dynein light chain 2a, cytoplasmic | 530 | 662 | - | - | |
Cam07g1227 | 677 | SUPERFAMILY | Profilin (actin-binding protein) | 533 | 661 | IPR036140 | - | |
Cam07g1227 | 677 | PRINTS | Plant profilin signature | 635 | 648 | IPR005455 | GO:0003779(InterPro) | |
Cam07g1227 | 677 | PRINTS | Plant profilin signature | 532 | 545 | IPR005455 | GO:0003779(InterPro) | |
Cam07g1227 | 677 | PRINTS | Plant profilin signature | 558 | 571 | IPR005455 | GO:0003779(InterPro) | |
Cam07g1227 | 677 | PRINTS | Plant profilin signature | 615 | 630 | IPR005455 | GO:0003779(InterPro) | |
Cam07g1227 | 677 | PRINTS | Plant profilin signature | 583 | 597 | IPR005455 | GO:0003779(InterPro) | |
Cam07g1227 | 677 | PRINTS | Plant profilin signature | 602 | 611 | IPR005455 | GO:0003779(InterPro) | |
Cam07g1227 | 677 | PRINTS | Plant profilin signature | 648 | 661 | IPR005455 | GO:0003779(InterPro) | |
Cam07g1227 | 677 | Pfam | Profilin | 532 | 662 | IPR048278 | GO:0003779(InterPro) | |
Cam07g1227 | 677 | ProSitePatterns | Insulinase family, zinc-binding region signature. | 106 | 129 | IPR001431 | GO:0004222(InterPro)|GO:0006508(InterPro) | |
Cam07g1227 | 677 | Gene3D | - | 290 | 504 | - | - | |
Cam07g1227 | 677 | SUPERFAMILY | LuxS/MPP-like metallohydrolase | 292 | 496 | IPR011249 | GO:0046872(InterPro) | |
Cam07g1227 | 677 | FunFam | Mitochondrial-processing peptidase subunit beta | 66 | 281 | - | - | |
Cam07g1227 | 677 | FunFam | Profilin | 532 | 662 | - | - | |
Cam07g1227 | 677 | Pfam | Peptidase M16 inactive domain | 243 | 421 | IPR007863 | - | |
Cam07g1227 | 677 | PANTHER | METALLOPROTEASE | 72 | 496 | IPR050361 | GO:0005739(PANTHER) | |
Cam07g1227 | 677 | Gene3D | - | 67 | 278 | - | - | |
Cam07g1227 | 677 | FunFam | mitochondrial-processing peptidase subunit alpha | 290 | 498 | - | - | |
Cam07g1227 | 677 | PRINTS | Profilin signature | 644 | 661 | IPR005455 | GO:0003779(InterPro) | |
Cam07g1227 | 677 | PRINTS | Profilin signature | 571 | 591 | IPR005455 | GO:0003779(InterPro) | |
Cam07g1227 | 677 | PRINTS | Profilin signature | 552 | 561 | IPR005455 | GO:0003779(InterPro) | |
Cam07g1227 | 677 | PRINTS | Profilin signature | 631 | 644 | IPR005455 | GO:0003779(InterPro) | |
Cam07g1227 | 677 | PRINTS | Profilin signature | 534 | 543 | IPR005455 | GO:0003779(InterPro) | |
Cam07g1227 | 677 | PRINTS | Profilin signature | 595 | 609 | IPR005455 | GO:0003779(InterPro) | |
Cam07g1227 | 677 | SUPERFAMILY | LuxS/MPP-like metallohydrolase | 75 | 284 | IPR011249 | GO:0046872(InterPro) | |
Cam07g1227 | 677 | Pfam | Insulinase (Peptidase family M16) | 86 | 231 | IPR011765 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cam07g1227 | Cam-Chr7:26611933 | Cam11g0212 | Cam-Chr11:3658864 | 1.90E-59 | dispersed | |
Cam07g0749 | Cam-Chr7:17912875 | Cam07g1227 | Cam-Chr7:26611933 | 1.60E-53 | transposed | |
Cam11g0205 | Cam-Chr11:3588999 | Cam07g1227 | Cam-Chr7:26611933 | 1.40E-208 | transposed | |
Cam07g1227 | Cam-Chr7:26611933 | Cam09g0024 | Cam-Chr9:1200515 | 1.50E-56 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cam07g1227 | K01412 | - | csv:101217854 | 934.865 |