Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam07g1258 ATGGATTTCTGGCCGGAATTTCTCGCTAGCAGTTGGGGAAAAGAGTTCGTCGCCGGTGGAATCGGCGGTGTCGCCGGCATCGTCTCCGGCTACCCACTCGACACCCTTCGCATCCGTCAACAACACTCCACCTCCGGCTCCGCCATCAGCGTCCTCCGTAACATCATGTCCAACGGCGGCCCCGCCGCCCTCTACAGAGGAATGGGAGCTCCACTCGCTTCCGTCACTTTCCAGAACGCCATTGTTTTCCAGACCAACGCCGTGCTCTGCAGAGCGTTCGATCCAGCGGCGACAGACAACCGTCCACCGTCGTACAAGGCGGTAGCATTAGGCGGATTCGGCACCGGAGCATTACAGAGCCTAATTTTAACACCGGTGGAGCTCGTGAAAATCCGTCTTCAATTACAGGACTTGGGTTCATCAAATCACACAGATCTGAGTTCATCTCGGCTCGGGCCGATGCAGGTTGCGAAGAACATTTTCAAAACCGAAGGCTACAAAGGGCTATACAGAGGCTTAACAATCACAATGCTAAGAGACGCTCCTTCCCATTGCTTTTACTTTTGGACTTACGAATTCATGAGAGAAAAGCTTCATCCCGGTTGTAGAAAATCCGGGCAAGAGACGTTGAGAACGATGCTGGTAGCCGGAGGACTCGCCGGCGTCGCCAGTTGGGTTTGTTGTTACCCATTGGATGTAGTTAAAACCAGACTTCAAGCTCAATCGAAATTCACGTTTCAAAAGTACAGTGGAATTGTGGATTGTTTCTACAAGAGCGTGAAAGAAGAAGGGTACAGTGTTTTATGGCGTGGATTAGGAACCGCCATAGCTAGAGCTTTTGTGGTGAATGGAGCCATTTTTTCTGCTTATGAACTCAGTTTGAGATGTCTATCCAACAATGGAGGATTTCATGCTGAAAATACCATTTGA 930 50.32 MDFWPEFLASSWGKEFVAGGIGGVAGIVSGYPLDTLRIRQQHSTSGSAISVLRNIMSNGGPAALYRGMGAPLASVTFQNAIVFQTNAVLCRAFDPAATDNRPPSYKAVALGGFGTGALQSLILTPVELVKIRLQLQDLGSSNHTDLSSSRLGPMQVAKNIFKTEGYKGLYRGLTITMLRDAPSHCFYFWTYEFMREKLHPGCRKSGQETLRTMLVAGGLAGVASWVCCYPLDVVKTRLQAQSKFTFQKYSGIVDCFYKSVKEEGYSVLWRGLGTAIARAFVVNGAIFSAYELSLRCLSNNGGFHAENTI 309
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 26940571 26941653 - CaPI482276_07g012580.1 Cam07g1258 131551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam07g1258 309 ProSiteProfiles Solute carrier (Solcar) repeat profile. 103 197 IPR018108 -
Cam07g1258 309 SUPERFAMILY Mitochondrial carrier 11 291 IPR023395 -
Cam07g1258 309 Gene3D Mitochondrial carrier domain 9 304 IPR023395 -
Cam07g1258 309 ProSiteProfiles Solute carrier (Solcar) repeat profile. 10 92 IPR018108 -
Cam07g1258 309 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 8 298 IPR050567 GO:0006810(PANTHER)|GO:0022857(PANTHER)
Cam07g1258 309 ProSiteProfiles Solute carrier (Solcar) repeat profile. 208 296 IPR018108 -
Cam07g1258 309 PRINTS Mitochondrial carrier protein signature 170 188 IPR002067 GO:0055085(InterPro)
Cam07g1258 309 PRINTS Mitochondrial carrier protein signature 15 28 IPR002067 GO:0055085(InterPro)
Cam07g1258 309 PRINTS Mitochondrial carrier protein signature 118 136 IPR002067 GO:0055085(InterPro)
Cam07g1258 309 PRINTS Mitochondrial carrier protein signature 217 239 IPR002067 GO:0055085(InterPro)
Cam07g1258 309 Pfam Mitochondrial carrier protein 109 198 IPR018108 -
Cam07g1258 309 Pfam Mitochondrial carrier protein 211 299 IPR018108 -
Cam07g1258 309 Pfam Mitochondrial carrier protein 11 87 IPR018108 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam07g1258 Cam-Chr7:26940571 Cam09g1193 Cam-Chr9:13029986 9.30E-46 dispersed
Cam10g2188 Cam-Chr10:35335101 Cam07g1258 Cam-Chr7:26940571 2.90E-26 transposed
Cam07g1258 Cam-Chr7:26940571 Cam09g0207 Cam-Chr9:2740689 1.10E-126 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam07g1258 K15109 - csv:101222749 602.823