Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam07g1316 ATGGCCCTTCGCCCTTTCTTCTGCTGTGGAATTGGTTCGGATCGGAAAGAAAGAGGGAAGAAACAGCAAACATGGAGGGTCTTTTCGTTGAAGGAATTACACTCGGCCACAAATAATTTTAATTATGATAACAAGCTTGGAGAAGGAGGATTTGGTAGCGTTTACTGGGGTCAGCTGTGGGATGGATCACAAATAGCAGTTAAAAGGTTGAAGGTCTGGAGCAACAAAGCAGACATGGAATTCTCTGTGGAAGTTGAAATACTGGCCCGAGTTAGGCACAAGAATCTATTGAGTTTACGTGGCTACTGTGCTGAAGGGCAAGAGCGCTTGATTGTGTATGACTACATGCCCAATCTAAGTCTACTCTCCCATCTACATGGACATCACTCATCAGAATGCCACCTTGATTGGAAACGTCGTATGAAAATTGCTATTGGGTCTGCCGAGGGAATTGCCTATCTTCACCACCAAGCAACTCCACATATCATTCATCGAGACATCAAAGCTAGTAATGTTTTGCTGGATCCAGATTTCCAAGCTCGAGTAGCTGACTTTGGATTCGCAAAACTCATCCCCGATGGTGCAACACATGTAACTACAAGAGTCAAGGGCACACTCGGATACCTCGCTCCTGAATATGCTATGTTAGGTAAGGCATCAGAGAGTTGTGACGTATACAGTTTTGGCATTCTCCTGCTTGAGCTTGCTACCGGCAAGAAGCCTCTTGAGAAATTGAGTGCAACAATGAAACGCACAATCATAGATTGGGCACTACCGATTGTAGTTGAGAAAAAAATTGACGAACTTGCAGACCCGAAGCTAAATGGAGACTATAACGCAGACGAACTAAAGAGAGTCGTCCTTGTTGCGCTCTGTTGTTCCCATTCACGACCTGAGAAACGACCGACCATGCTCGAGGTGGTTGAGCTGCTAAAAGGAGAATCAAAAGAGAAGCTAGCCAAATTAGAAGATGATGAGCTGTTCAAGAGCCATCAAGTAGCTGCACGAACTACAGAAATACAAGCTGGTGAAGATAGCTCAGACTTCATATCAGAAGAAAAGGATTCAAAAGAGAAGGAGAAAGAGAATTCATCACAAAACCCCACATGA 1110 44.32 MALRPFFCCGIGSDRKERGKKQQTWRVFSLKELHSATNNFNYDNKLGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKADMEFSVEVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPNLSLLSHLHGHHSSECHLDWKRRMKIAIGSAEGIAYLHHQATPHIIHRDIKASNVLLDPDFQARVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKASESCDVYSFGILLLELATGKKPLEKLSATMKRTIIDWALPIVVEKKIDELADPKLNGDYNADELKRVVLVALCCSHSRPEKRPTMLEVVELLKGESKEKLAKLEDDELFKSHQVAARTTEIQAGEDSSDFISEEKDSKEKEKENSSQNPT 369
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 27531992 27534945 + CaPI482276_07g013160.1 Cam07g1316 131609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam07g1316 369 CDD STKc_IRAK 46 313 - -
Cam07g1316 369 FunFam PTI1-like tyrosine-protein kinase At3g15890 12 115 - -
Cam07g1316 369 SUPERFAMILY Protein kinase-like (PK-like) 23 311 IPR011009 -
Cam07g1316 369 Pfam Protein kinase domain 41 309 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam07g1316 369 Gene3D Phosphorylase Kinase; domain 1 12 115 - -
Cam07g1316 369 Gene3D Transferase(Phosphotransferase) domain 1 116 329 - -
Cam07g1316 369 SMART serkin_6 40 311 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam07g1316 369 ProSitePatterns Serine/Threonine protein kinases active-site signature. 162 174 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam07g1316 369 ProSiteProfiles Protein kinase domain profile. 40 319 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam07g1316 369 MobiDBLite consensus disorder prediction 337 369 - -
Cam07g1316 369 Coils Coil 305 325 - -
Cam07g1316 369 PANTHER OS01G0750732 PROTEIN 22 347 IPR050885 -
Cam07g1316 369 MobiDBLite consensus disorder prediction 347 369 - -
Cam07g1316 369 FunFam PTI1-like tyrosine-protein kinase At3g15890 116 327 - -
Cam07g1316 369 ProSitePatterns Protein kinases ATP-binding region signature. 46 68 IPR017441 GO:0005524(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam04g0070 Cam-Chr4:2113991 Cam07g1316 Cam-Chr7:27531992 3.10E-20 dispersed
Cam06g1442 Cam-Chr6:25884399 Cam07g1316 Cam-Chr7:27531992 7.10E-115 dispersed
Cam07g1316 Cam-Chr7:27531992 Cam11g0309 Cam-Chr11:4618815 1.70E-78 dispersed
Cam10g2197 Cam-Chr10:35392340 Cam07g1316 Cam-Chr7:27531992 3.30E-64 dispersed
Cam10g2198 Cam-Chr10:35397210 Cam07g1316 Cam-Chr7:27531992 2.10E-66 dispersed
Cam11g1259 Cam-Chr11:25017858 Cam07g1316 Cam-Chr7:27531992 7.90E-65 dispersed
Cam03g0420 Cam-Chr3:5226062 Cam07g1316 Cam-Chr7:27531992 1.70E-56 transposed
Cam05g0918 Cam-Chr5:8310053 Cam07g1316 Cam-Chr7:27531992 2.50E-114 transposed
Cam05g1816 Cam-Chr5:27043462 Cam07g1316 Cam-Chr7:27531992 3.10E-28 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85330 PF00069 Pkinase 7.10E-45 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam07g1316 - - - 0.0