Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam07g1347 ATGGATTTTCCAATACCAGAACCATCCCCTTCTGAAACTTCAACAATCATCTCTGTTTCAGAGTCTTCTCCACCATGTCCAAAGGGGGATCGAATAACAGACCAAATTAACCCTAATTCTCAACTGGGTTTGGATCTGAGCCTTTCTAATAAAGATTCCGATCATGGGTCGAACCCAGAACTCAATCTAATCGACTGTTTCGATGTGAATTTAACAACAGAACCTACAGATACAGAAACAGAGCCCAGGGTTTTCTCTTGCAACTATTGCCAGAGGAAATTTTACAGTTCTCAAGCTCTTGGGGGACACCAAAATGCCCACAAGCGAGAGAGGACTTTAGCAAAGAGGACTCAACGGGTCGGGTCGGCCTCTAATTTCGGGCTTGCTCATCGGTATTCGAGTTTGGCTTCTCTTCCTCTTCATGGGTCGTTCAGTAGGTCGCTTGGAATTCAAGCTCATTCCATGGTTCATAAGCCTTCTTCTCTTCATGTTTCTGCAATTGGGTCATCTGGAATTTATGGTCACAGTGGATGGTCAAGGCAGCCGCTCGATCAACACCCGGCGATTGGCCGGTTGATGCAGGGAAATTCCCACGTTGGAAGTCTTAGAGGCATTTCGTCGAACACCGGAGCTGCAAGGTTTCAGGGTGTGAAGAAATTCTCTCCGGCGGCAGACACGGAGGCGCCACCGCCGCTCGGAGGGTTCTGGTGGGATGGCGGCGGTGGTGGTGGTTTTAGTCATCTGAAGATGAAGCCTAAACAAGATGAGTTGTTGAAGCTTGACTTGTCTCTTAAGCTCTAA 801 47.94 MDFPIPEPSPSETSTIISVSESSPPCPKGDRITDQINPNSQLGLDLSLSNKDSDHGSNPELNLIDCFDVNLTTEPTDTETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRTQRVGSASNFGLAHRYSSLASLPLHGSFSRSLGIQAHSMVHKPSSLHVSAIGSSGIYGHSGWSRQPLDQHPAIGRLMQGNSHVGSLRGISSNTGAARFQGVKKFSPAADTEAPPPLGGFWWDGGGGGGFSHLKMKPKQDELLKLDLSLKL 266
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 27821361 27822161 - CaPI482276_07g013470.1 Cam07g1347 131640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam07g1347 266 FunFam Zinc finger protein 2 67 131 - -
Cam07g1347 266 MobiDBLite consensus disorder prediction 1 33 - -
Cam07g1347 266 ProSitePatterns Zinc finger C2H2 type domain signature. 87 107 IPR013087 -
Cam07g1347 266 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 7 266 IPR044246 GO:0009788(InterPro)
Cam07g1347 266 SUPERFAMILY beta-beta-alpha zinc fingers 81 112 IPR036236 -
Cam07g1347 266 MobiDBLite consensus disorder prediction 8 22 - -
Cam07g1347 266 Gene3D Classic Zinc Finger 66 130 - -
Cam07g1347 266 ProSiteProfiles Zinc finger C2H2 type domain profile. 85 112 IPR013087 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam05g1202 Cam-Chr5:11305459 Cam07g1347 Cam-Chr7:27821361 2.00E-20 dispersed
Cam05g1811 Cam-Chr5:26989664 Cam07g1347 Cam-Chr7:27821361 1.50E-23 dispersed
Cam07g1347 Cam-Chr7:27821361 Cam09g0530 Cam-Chr9:5376442 3.90E-08 dispersed
Cam01g0685 Cam-Chr1:7616335 Cam07g1347 Cam-Chr7:27821361 2.10E-24 transposed
Cam05g1216 Cam-Chr5:11521217 Cam07g1347 Cam-Chr7:27821361 6.10E-25 transposed
Cam07g0167 Cam-Chr7:2883467 Cam07g1347 Cam-Chr7:27821361 9.30E-11 transposed
Cam10g1607 Cam-Chr10:29864063 Cam07g1347 Cam-Chr7:27821361 7.60E-15 transposed
Cam11g0115 Cam-Chr11:2811700 Cam07g1347 Cam-Chr7:27821361 2.10E-24 transposed
Cam11g1336 Cam-Chr11:26069927 Cam07g1347 Cam-Chr7:27821361 3.70E-18 transposed
Cam06g1468 Cam-Chr6:26099932 Cam07g1347 Cam-Chr7:27821361 3.80E-13 transposed
Cam07g1347 Cam-Chr7:27821361 Cam08g1827 Cam-Chr8:24353091 1.20E-30 wgd
Cam07g1347 Cam-Chr7:27821361 Cam09g0323 Cam-Chr9:3588891 1.40E-26 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
52322 None None None None Cam TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam07g1347 - - - 0.0