Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam07g1353 ATGGCAGAGGAGAAGATAGGGGAAGAAGGCAACAAAAATTTGAGGGGAAGAAAGTCTACATGGCCAACCCTCCGCCGTGTAGACTCACTCAATTTGGAGGCCGGAAGGATTCCGGCCATCGCAGCTCGTCAACTCTCCAGTGTAAATTGGCGGCGAACATTAAGCTTGGCGTTTCAGAGCGTGGGAGTGGTGTACGGCGACATCGGGACATCGCCGTTGTACGTGTTTGCAAGCACGTTCAGCAACGGGACGATCGGGGACACAGACGATGTGATCGGAGTTCTATCACTCATAATCTATACCATAGCATTGGTTCCATTGTTGAAGTATGTTTTCATTGTGCTGTGGGCAAATGATAATGGCGATGGGGGGACATTTGCCCTTTACTCGTTGTTGTGCCGCTACGTGAAAGTGGGGTTGATTCCTAATGAACAGCCAGAGGACATGGAACTCTCAAATTATCAGCTCCTTATGCCTTCCAATTTGAGAAGATCTCAGAAAGTGAAAGAGAAGCTTGAGAATAGTATGTTTGCAAAAGTTGCCCTTTTTCTTGTCACTATTGCTGGGACTTCCATGGTTATTGGAGATGGAGTTCTCACTCCATCTATCTCGGTTCTCTCAGCAGTGAGTGGAATCAAATCACTAGGAACAGATGCGGTTGTGGGGGTTTCAGTAGCTATTCTTGTAATTTTGTTCTGCATTCAACGATTTGGAACTGACAAAGTTGGATTCTCATTTGCCCCAATAATATTTATTTGGTTTGCATTTATTGGTGGCATTGGCCTCTTCAACTTGTTCAAGCATGACCCTGCTGTTCTCAAAGCTTTTAACCCTAAATATATCTTTGATTACTTCAAAAGAAATGGCAAACAAGCTTGGGTTTCCCTTGGTGGAGTTTTTCTTTGCATTACAGGGACTGAGGCCATGTTTGCTGATTTGGGTCACTTCAATGTTAGAGCCATCCAGATTAGTTTCTCTTCTATTGTATTCCCTGCTTTAATAGCAGCCTACAGCGGGCAAGCTGCATATCTAAGAAAATTCCCAGATCATGTTGGCAATACTTTCTATGACTCAGTTCCAGATCCTTTGTACTGGCCAATGTTCGTAGTTGCAGTGGCAGCCTCCATCATAGCAAGCCAAGCAATGATCTCAGGAGCATTTGCCATAATATCACAATCCTTGTCTTTAGGTTGCTTCCCAAGAGTAAAAGTTATCCACACTTCACCCAAATACGAAGGCCAAGTTTACATCCCAGAGATCAATTACCTTCTAATGTTGGCATGTGTGATCGTAACCGCGGCCTTCAGAACCACGGAGAACATCGGTCACGCCTACGGCATTGCGGTCGTGTCCGTCATGATCATGACCACTGCCATGGTTTCTCTCATCATGGTGGTTATTTGGAAGACCAGTATTTGGTTGATAGTTTGTTTCATTCTGGTGTTTGGCTCTATTGAACTTCTCTATTTCTCGTCTGTTCTTTACAAGTTCACTCAAGGCGGGTTTCTTCCTCTTATTCTTGCTCTTTTTCTCATGGCTGTCATGATTGTTTGGCACTATGTTCATAGGGAAAGATACATTTTTGAACTCAAAAATAAGGTCTCTAGTGGCTACATAACCGAGCTAGCTAATAATCCTGATGTTAACCGAATTCCTGGAATTGGTCTTCTTTACTCTGAGTTGGTTCAAGGTATTCCTCCCATTTTTCCTCACTTCATTTCTAGTATTCCTTCTGTTCACTCCGTCATCGTCTTCGTCTCCATCAAGTCCATTCCCATCAGCAAAGTCGCACCCGACGAGCGGTTTTTGTTCCGCCATGTCGAGCCCAGGGAGTACCGTATGTTTCGATGTGTCGTCAGATATGGATACAAAGACATAATCACCGGATCTGCTGAGTTTGAGCGGCAGTTGGTGGAGCGCTTGAAAGAATTCATACGCCAAGAACATGTAATGCGGGAAGGTGTTCCAATAGAGCCACCAGCTTCAGTCAAAATTGAACCAACAAAAGTAAAACCTTCTTCTTCTTCTTCTTCAGTAGCAACAGTGCATGTGGAAGGTGCGACGACAGTATCCGTGGAAACGGGAAACCAGTCATCTCGACGCTCGTCAGGGTCCATTCAGCCGGTCGGCGGTTCGAAATCGAGGGGGTCGGATCGTCAAGTACTAGGAGTGGCTGCAGTGGAAGAAGAGATGGGATTTATAGAGAAAGCAATGAAGAAAGGGGTGGTTTATTTGTTGGGAGAAGCAGAGGTAGTGGCTGAACCAAAATCCTCATTGTTTAAGAAGATGGTGGTTAATTATGCTTATAGTTTCTTGAGGAAGAACTTTAGGCAAGGGGAAAATATTCTTGAGATTCCACGTACAAGGCTTTTAAGGGTTGGAATGACTTATGAAATATGA 2400 44.42 MAEEKIGEEGNKNLRGRKSTWPTLRRVDSLNLEAGRIPAIAARQLSSVNWRRTLSLAFQSVGVVYGDIGTSPLYVFASTFSNGTIGDTDDVIGVLSLIIYTIALVPLLKYVFIVLWANDNGDGGTFALYSLLCRYVKVGLIPNEQPEDMELSNYQLLMPSNLRRSQKVKEKLENSMFAKVALFLVTIAGTSMVIGDGVLTPSISVLSAVSGIKSLGTDAVVGVSVAILVILFCIQRFGTDKVGFSFAPIIFIWFAFIGGIGLFNLFKHDPAVLKAFNPKYIFDYFKRNGKQAWVSLGGVFLCITGTEAMFADLGHFNVRAIQISFSSIVFPALIAAYSGQAAYLRKFPDHVGNTFYDSVPDPLYWPMFVVAVAASIIASQAMISGAFAIISQSLSLGCFPRVKVIHTSPKYEGQVYIPEINYLLMLACVIVTAAFRTTENIGHAYGIAVVSVMIMTTAMVSLIMVVIWKTSIWLIVCFILVFGSIELLYFSSVLYKFTQGGFLPLILALFLMAVMIVWHYVHRERYIFELKNKVSSGYITELANNPDVNRIPGIGLLYSELVQGIPPIFPHFISSIPSVHSVIVFVSIKSIPISKVAPDERFLFRHVEPREYRMFRCVVRYGYKDIITGSAEFERQLVERLKEFIRQEHVMREGVPIEPPASVKIEPTKVKPSSSSSSVATVHVEGATTVSVETGNQSSRRSSGSIQPVGGSKSRGSDRQVLGVAAVEEEMGFIEKAMKKGVVYLLGEAEVVAEPKSSLFKKMVVNYAYSFLRKNFRQGENILEIPRTRLLRVGMTYEI 799
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 27886334 27895898 - CaPI482276_07g013530.1 Cam07g1353 131646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam07g1353 799 MobiDBLite consensus disorder prediction 663 682 - -
Cam07g1353 799 MobiDBLite consensus disorder prediction 690 717 - -
Cam07g1353 799 MobiDBLite consensus disorder prediction 690 714 - -
Cam07g1353 799 MobiDBLite consensus disorder prediction 668 682 - -
Cam07g1353 799 Pfam K+ potassium transporter integral membrane domain 56 536 IPR053951 -
Cam07g1353 799 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 39 799 IPR003855 GO:0006813(PANTHER)|GO:0015079(PANTHER)|GO:0015079(InterPro)|GO:0016020(InterPro)|GO:0016020(PANTHER)|GO:0071805(InterPro)
Cam07g1353 799 NCBIfam potassium uptake protein 56 799 IPR003855 GO:0015079(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
Cam07g1353 799 Pfam K+ potassium transporter C-terminal domain 552 799 IPR053952 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam07g1353 Cam-Chr7:27886334 Cam09g0607 Cam-Chr9:5978585 1.20E-225 dispersed
Cam07g1353 Cam-Chr7:27886334 Cam10g1043 Cam-Chr10:22892577 3.70E-227 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam07g1353 K03549 - csv:101205628 1327.0