Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cam07g1412 | ATGTCCTTAAAATGTGCCAAAGGGAGGAAGTGGAGGCCGGTGGAGCGTTACAGTTTTGCACTTACTCAACGGACAACACTTGTAGTTCTTCTTCTTCGTCGTCTTCTTCCTGGGAAATCCTTTATAATCCCCATCGACCTTTCATTCTTCTTCAAATTACAACTGGGTTGGGCAGGAGATGAACTTTACGCTGAGCTATGGAGAGTCTCGGCTGGGCCTCTTGTGGAAATTCCTCGAGTTAATGAGAAGGTTCTTTATTTTCCTCAAGGCCACATGGAACAGTTGGAGGCATCTACAAATCAGGAGCTAAATCAGAAACTTCCTTTATTTAATCTTTCCTCCAAAATTCTCTGTCAAGTAGTTGATACCCGGCTGCTGGCAGAGCAGGACAGTGATGAGGTTTATGCACAGATAACTTTAATGCCAGAAGCAAATCAAGAGTTACCTACGAGTCTCGAACCTTCACCCCCAGAGTGTCGAAAACCGAAAGTCCATTCGTTTTGCAAGGTTTTAACTGCTTCTGATACTAGCACCCATGGGGGGTTCTCCGTGCTCCGGAAACATGCCACCGAATGCCTGCCTCCATTGGATATGACCCAGCAGACCCCAACTCAGGAACTCGTAGCCAAAGATCTTCATGGTTTCGAGTGGCGATTCAAGCATATATTTAGGGGTCAACCACGACGGCATTTGCTGACGACCGGATGGAGCACCTTTGTTACTTCTAAGAGACTAGTTGCTGGAGATTCTTTTGTGTTCTTGAGGGGGGAAAATGGGGAATTGCGAGTTGGAGTGAGGCGTCTTGCTCGCCAACAGAGCAGCATGCCTTCATCTGTGATTTCAAGTCACAGCATGCACTTAGGAGTGCTTGCTACTGCATCTCATGCCGTGTCAACTCAAACTCGCTTTGTTGTCTATTATAAGCCAAGGGCAAGCCAGTTTATCGTCAGCTTGAATAAGTACATAGAAGCGATGAACTATAAGTTCTCAGTTGGGATGAGGTTCAAGATGAGGTTTGAGGGAGAGGAGTCTCCAGAGAGAAGGTTTTCGGGTACCATAGTTGGAGTTGACGACATGTCTCCTCACTGGACCAATTCAGACTGGCGATCACTGAGAATTCAATGGGATGAACTTGCATCTATTCAGAGACCTGATAGAGTTTCACCATGGGAGATTGAACCTTTTGTGGCTCCTACGTCCCCAAGCATTCCGCACTCTATTTCCATAAAGAATAAAAGGCCTCGGCCACCACTTGAAATTCTTGATTCTGATAATTCAACTGTAACAACTCTAAGACATCCAGGATCATCTCAATCACATGATGATAGAACACAGCTGAGTGTTGCTGCTGCTGAAATTAAAAGATTTGAAAATCATGCAACATGGCATTACAAGCAAACGGATGTTAGCAGCAATGGGAATTCTGTATCAAGGAGTCCGATGGAGGGCTCTTGGTTAACTTCTCCAAATGGGAGTGTTTCTCAGCATCGGTTACAGGAATTGACAGATGACCGTAAGAGCAGTTCTGTTTGGTCAACGGTCTTTCCAGGAGTGCTGGCATCAAACTCGACATGTCCAACTCCACGCCCATCAAATCCAAAGAGTGACCAAGTACATGACCTTGGGGAAAAGGGGAGGAAAACTGAAGTGGCTCCAAGCTGTCGCTTGTTCGGGATCGAGCTCATCAATCATTCTAAGAGCCCAGTTCCTCCTGAAAGGGTGCCCGATCAACCAATTAGCGCACCAAATGAAATCACTGATGCAGAGCAGAACTCAAACCTGCCAAAGGCTTCTAAAGAAAGAAAATTAGGACTTTTACAAGTACCTCCTAAAGAGATCCAGCACAAGCAGAACAGCTCGACCAGCAGCCGAAGCCGTACTAAGGTACAAATGCAGGGGATGGCTGTCGGACGTGCGGTAGACCTTACCACATTGGAGGGGTATGGCCAACTCATTGATGAACTAGAAAAGATGTTTGATATCAAGGGAGAACTTCGCCCTCGTAATAAGTGGGAGATCGTCTTCACTGACGATGAAGGAGATACAATGCTCATGGGCGACTACCCATGGCAGGAATTCTGTAACATGGTGAGAAGAATATACATATGGTCAAGTCAGGATGTGAAGATGAGTTCGGGTAGCAAACTTGCGATGTCTACAATCGAATGTGACGGGACTGTAATAACCTCGGAGTCAGCCGACAGCTGA | 2208 | 46.2 | MSLKCAKGRKWRPVERYSFALTQRTTLVVLLLRRLLPGKSFIIPIDLSFFFKLQLGWAGDELYAELWRVSAGPLVEIPRVNEKVLYFPQGHMEQLEASTNQELNQKLPLFNLSSKILCQVVDTRLLAEQDSDEVYAQITLMPEANQELPTSLEPSPPECRKPKVHSFCKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAKDLHGFEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDSFVFLRGENGELRVGVRRLARQQSSMPSSVISSHSMHLGVLATASHAVSTQTRFVVYYKPRASQFIVSLNKYIEAMNYKFSVGMRFKMRFEGEESPERRFSGTIVGVDDMSPHWTNSDWRSLRIQWDELASIQRPDRVSPWEIEPFVAPTSPSIPHSISIKNKRPRPPLEILDSDNSTVTTLRHPGSSQSHDDRTQLSVAAAEIKRFENHATWHYKQTDVSSNGNSVSRSPMEGSWLTSPNGSVSQHRLQELTDDRKSSSVWSTVFPGVLASNSTCPTPRPSNPKSDQVHDLGEKGRKTEVAPSCRLFGIELINHSKSPVPPERVPDQPISAPNEITDAEQNSNLPKASKERKLGLLQVPPKEIQHKQNSSTSSRSRTKVQMQGMAVGRAVDLTTLEGYGQLIDELEKMFDIKGELRPRNKWEIVFTDDEGDTMLMGDYPWQEFCNMVRRIYIWSSQDVKMSSGSKLAMSTIECDGTVITSESADS | 735 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 28640738 | 28645939 | + | CaPI482276_07g014120.1 | Cam07g1412 | 131705 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cam07g1412 | 735 | MobiDBLite | consensus disorder prediction | 521 | 549 | - | - | |
Cam07g1412 | 735 | Gene3D | - | 164 | 268 | IPR015300 | - | |
Cam07g1412 | 735 | SUPERFAMILY | DNA-binding pseudobarrel domain | 154 | 296 | IPR015300 | - | |
Cam07g1412 | 735 | FunFam | Auxin response factor | 165 | 269 | - | - | |
Cam07g1412 | 735 | FunFam | Auxin response factor | 328 | 399 | - | - | |
Cam07g1412 | 735 | Gene3D | - | 328 | 399 | - | - | |
Cam07g1412 | 735 | PANTHER | AUXIN RESPONSE FACTOR 4-RELATED | 61 | 711 | IPR044835 | GO:0003677(InterPro)|GO:0006355(InterPro)|GO:0009725(InterPro) | |
Cam07g1412 | 735 | MobiDBLite | consensus disorder prediction | 467 | 495 | - | - | |
Cam07g1412 | 735 | Pfam | Auxin response factor | 293 | 371 | IPR010525 | GO:0003677(InterPro)|GO:0005634(InterPro)|GO:0006355(InterPro)|GO:0009725(InterPro) | |
Cam07g1412 | 735 | Pfam | B3 DNA binding domain | 167 | 267 | IPR003340 | GO:0003677(InterPro) | |
Cam07g1412 | 735 | SMART | B3_2 | 167 | 269 | IPR003340 | GO:0003677(InterPro) | |
Cam07g1412 | 735 | MobiDBLite | consensus disorder prediction | 612 | 628 | - | - | |
Cam07g1412 | 735 | Gene3D | - | 619 | 711 | - | - | |
Cam07g1412 | 735 | ProSiteProfiles | PB1 domain profile. | 624 | 705 | IPR053793 | - | |
Cam07g1412 | 735 | MobiDBLite | consensus disorder prediction | 403 | 422 | - | - | |
Cam07g1412 | 735 | MobiDBLite | consensus disorder prediction | 565 | 628 | - | - | |
Cam07g1412 | 735 | Pfam | AUX/IAA family | 671 | 707 | IPR033389 | - | |
Cam07g1412 | 735 | Pfam | AUX/IAA family | 614 | 660 | IPR033389 | - | |
Cam07g1412 | 735 | SUPERFAMILY | CAD & PB1 domains | 618 | 700 | - | - | |
Cam07g1412 | 735 | ProSiteProfiles | B3 DNA-binding domain profile. | 167 | 269 | IPR003340 | GO:0003677(InterPro) | |
Cam07g1412 | 735 | CDD | B3_DNA | 165 | 267 | IPR003340 | GO:0003677(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cam01g0178 | Cam-Chr1:2125532 | Cam07g1412 | Cam-Chr7:28640738 | 5.90E-222 | dispersed | |
Cam07g1412 | Cam-Chr7:28640738 | Cam11g0027 | Cam-Chr11:1853117 | 1.80E-172 | dispersed | |
Cam07g1412 | Cam-Chr7:28640738 | Cam09g0937 | Cam-Chr9:9621923 | 8.00E-213 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
52327 | PF02362 | B3 | 8.70E-22 | CL0405 | Cam | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cam07g1412 | K14486 | - | csv:101213942 | 1224.15 |