Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam07g1427 ATGGGGCAGTCGGTCACACGCTTGAAAACATCCCTCTTCGCACGTGCTTCCATGTTTTACTTTTCACTTTTCATCGCTTGCTTTCCGTTTTTTTTTTCCGCCGGTTTAACGCCTGATGATCTTGTTTGTTTGTTTGTTTGTTTTTCTTCTGAGTTACTTGGCTACTCTGATACGATTTTGGACTGGACTGGACTGGATTGGATTGTTATTGTTCTGTTTTGTTTCTTCTGGTTTGAGCAGTTTCGGGTGGAGAGTGGTTGTAGTTCTGGTGCGCTACTGCATCTATTGAATACTATGATATTTAAGTCTTGTTTGGCCGAGGAAGAGTCGTTAAATGATTTGAGAGCCACCATGGGCATCTGTCTGGTCAAATGTTCTGGCTTGTTGGTTCTTCACGTTCTACTTCTTTGTATGACAATGAATAAAAGCACTGGCCTCACCCCTGATGGTGCGGCACTTCTAAGCTTTAGGATGGCAGTTGCCAGTTCTGATGGAGTCATCTTCCAGTGGAGACCTGAGGATCCAAACCCTTGTAACTGGACAGGAGTGGTCTGCGATCCAAAAACGAAGAGAGTAATCTCATTGAAGCTTGCAAGTCACAAACTGAGTGGGTTCATTGCACCTGAACTTGGGAAGCTAGACCAATTGAAGACCCTGACTCTTTCGGACAACAACCTATATGGAACAATACCATCAGAACTGGGAAATTGCTCGCAGTTGCAGGGAATGTTCTTGCAAAGAAACTACCTAAGTGGAGCGATTCCCTATGAGCTGGGAAACCTTTCAGAGTTGGAAATGTTAGACGTTTCTAGCAACTCCCTTAGTGGAAATATCCCAACGTCCCTTGGGAATTTGGATAAGCTGGCTATTCTCAATGTTTCATCAAATTTTTTAATTGGACCAGTACCTTCTGATGGTGTTCTTTCCAAGTTTTCAGAGACTTCCTTCGTTGGAAATCGTGGTTTGTGTGGGAAACAAGTTAGTGTCATCTGCAAAGACGATAATACTGGATCTGGAACAAATCCTGAGTACCCAAGCTCAGCCCAAAATCAAATGAGGAGGAAGTATTCTGGCCGGCTGCTCATAAGTGCATCAGCAACAGTGGGTGCACTACTACTTGTTGCTCTTATGTGTTTCTGGGGTTGCTTTCTTTACAAAAGATTTGGCAAAAATGACAAGAAAGGTCTTGTGAAGGATGTTGGTGGAGGCGCATCCGTTGTGATGTTTCATGGAGACTTGCCATACTCTTCAAAAGACATCATGAAGAAGTTGGAAACCTTGAATGAGGAACACATAATTGGTTCTGGGGGTTTTGGAACGGTTTACAGGCTTGCAATGGATGATGGCAATGTATTTGCTTTGAAAAATATTGTAAAGATAAATGAGGGGTTTGATCACTTTTTTGAGAGGGAACTTGAAATTCTTGGAAGTTTGAAGCATCGGTACCTTGTTAATTTGAGAGGATATTGCAACTCTCCCACATCAAAACTGTTGATTTATGATTATCTATCTGGGGGAAGCCTTGACGAGGCCCTTCATGAAAGATCTGAGCAATTGGATTGGGACACACGCTTGAATATTATATTGGGAGCAGCAAAAGGGCTTGCTTATTTGCACCATGATTGTTCACCCAGAATCATACATCGGGATATCAAGTCAAGCAACATTTTGCTCGATGGCAATCTGGATGCTCGAGTTTCTGACTTTGGACTTGCCAAGCTTCTGGATGACGATAAATCTCATATTACAACCATTGTTGCTGGAACATTTGGTTATTTGGCCCCCGAATATATGCAAAGTGGTAGGGCAACTGAAAAGACCGATGTATATAGTTTTGGAGTTCTGGTACTTGAAGTACTGAGTGGAAAACGACCTACGGATGCATCATTTATTGAGAAAGGCCTGAACATTGTTGGCTGGTTAAATTTTCTTGTCACGGAGAATAGGCAACGAGAAATAGTTGATCCACAATGTGAAGGAGTGCAGTCGGAAACTCTTGACGCATTGCTAAGGCTTGCTATTCAGTGTGTTTCTTCTAGTCCAGATGATCGACCGACTATGCACCGAGTAGTCCAGTTCTTTGAATCCGAGGTTATGACTCCATGCCCAAGTGACTTCGATGATTCCAATTCTGATTAA 2139 42.68 MGQSVTRLKTSLFARASMFYFSLFIACFPFFFSAGLTPDDLVCLFVCFSSELLGYSDTILDWTGLDWIVIVLFCFFWFEQFRVESGCSSGALLHLLNTMIFKSCLAEEESLNDLRATMGICLVKCSGLLVLHVLLLCMTMNKSTGLTPDGAALLSFRMAVASSDGVIFQWRPEDPNPCNWTGVVCDPKTKRVISLKLASHKLSGFIAPELGKLDQLKTLTLSDNNLYGTIPSELGNCSQLQGMFLQRNYLSGAIPYELGNLSELEMLDVSSNSLSGNIPTSLGNLDKLAILNVSSNFLIGPVPSDGVLSKFSETSFVGNRGLCGKQVSVICKDDNTGSGTNPEYPSSAQNQMRRKYSGRLLISASATVGALLLVALMCFWGCFLYKRFGKNDKKGLVKDVGGGASVVMFHGDLPYSSKDIMKKLETLNEEHIIGSGGFGTVYRLAMDDGNVFALKNIVKINEGFDHFFERELEILGSLKHRYLVNLRGYCNSPTSKLLIYDYLSGGSLDEALHERSEQLDWDTRLNIILGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLDARVSDFGLAKLLDDDKSHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLVTENRQREIVDPQCEGVQSETLDALLRLAIQCVSSSPDDRPTMHRVVQFFESEVMTPCPSDFDDSNSD 712
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 28839867 28852796 - CaPI482276_07g014270.1 Cam07g1427 131720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam07g1427 712 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 27 - -
Cam07g1427 712 Pfam Protein kinase domain 429 692 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam07g1427 712 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 503 705 - -
Cam07g1427 712 Gene3D Ribonuclease Inhibitor 147 333 IPR032675 -
Cam07g1427 712 FunFam LRR receptor-like serine/threonine-protein kinase FEI 1 401 502 - -
Cam07g1427 712 Pfam Leucine rich repeat 215 274 IPR001611 GO:0005515(InterPro)
Cam07g1427 712 SMART serkin_6 427 694 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam07g1427 712 Gene3D Transferase(Phosphotransferase) domain 1 503 701 - -
Cam07g1427 712 ProSitePatterns Protein kinases ATP-binding region signature. 433 455 IPR017441 GO:0005524(InterPro)
Cam07g1427 712 Gene3D Phosphorylase Kinase; domain 1 403 502 - -
Cam07g1427 712 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 146 308 - -
Cam07g1427 712 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 275 696 IPR050647 -
Cam07g1427 712 ProSiteProfiles Protein kinase domain profile. 427 699 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam07g1427 712 SUPERFAMILY Protein kinase-like (PK-like) 411 694 IPR011009 -
Cam07g1427 712 SUPERFAMILY L domain-like 147 310 - -
Cam07g1427 712 ProSitePatterns Serine/Threonine protein kinases active-site signature. 546 558 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam07g1427 712 Pfam Leucine rich repeat N-terminal domain 148 186 IPR013210 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam07g1427 Cam-Chr7:28839867 Cam11g1649 Cam-Chr11:29204279 4.30E-227 dispersed
Cam07g1427 Cam-Chr7:28839867 Cam01g1487 Cam-Chr1:28427222 2.20E-135 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85332 PF00069 Pkinase 3.70E-47 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam07g1427 - - - 0.0