Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam07g1457 ATGAATAATATTATCAAGTATAATAATCTCCTCACCAATCTTGTTCTATCTTCTCTTCTCCCTCTCCTTGCTTTCCTCTTCATGATCAATCCTACCCCTCCCTTCCTTTCCAATTTCGTCGTCTTTCGTGACTCCGTCGATTGTCGTCACCACCACCATCACCATCATAAAAACGCAACTGACGAACAGGACCAAACAATGATAACTTCCATTTGTGATAACTTCCCGACCACCCTCCTCCCACCAGAAACCACCAACACTTCTGTTTTTTGTGTTGACCGAAACGGTTGTTGCAACTTCACAACAGTTCAAGCAGCAGTTGACGCTGTGCCAAACTTGAGCTTCAAACGAAACCTAATTTGGATCAACGCTGGAATTTACTACGAGAAGGTGATGGTTCCAAAATCTAAACCAAACGTGACATTTCAAGGACAAGGCTATACAACCACCGCCATTGTTTGGAATGACACTGCCAATTCTTCCCATGGCACCTTTTATAGTGGCTCTGTCCAAGTCTTCTCTTCCAATTTTATTGCCAAGAATATAAGCTTCATGAATGTGGCGCCAATTCCAGGGCCGGGCGACATCGGAGCACAGGCGGTGGCGATTAGAATCGGCGGAGACCAGGCGGCATTTTGGAGCTGCGGATTCTTCGGCGCTCAAGACACTCTCCACGACGACCGTGGCCGCCATTACTTCAAAGATTGCTACATCCAAGGCTCCATCGATTTCATCTTCGGAAACGGAAGATCCTTCTACGAGAGTTGCCAGTTGATTTCGATGGCGAATCCGGTCCCGCAAGGATCGAAGTTTGTGAACGGAGCGGTGACGGCGCACGGCAGAGCCTCCGCTGACGAGAACTCTGGATTTGTTTTTGTTAATTGCAGCATCGGCGGGACCGGCAGAGTGTGGCTCGGCCGCGCGTGGCGGCCGTTCTCTCGCGTCGTCTTTGCTAACACCGTCATGACGGATATTATTGCGGCGGAGGGGTGGAATGACTTTAATGACCCTGCAAGGGATCAGACAATCTTCTATGGAGAGTACAACTGCAGTGGAGCAGGAGCCAATATGAGCTCAAGGGCTCCCTTTGTTCAAAGGCTTAATGATACTCAAGTTTCCTCTTTCCTCAACTTATCCTTCATTGATGCTGACCAATGGCTCCAACCCTACTCATTGTTTTAA 1182 48.39 MNNIIKYNNLLTNLVLSSLLPLLAFLFMINPTPPFLSNFVVFRDSVDCRHHHHHHHKNATDEQDQTMITSICDNFPTTLLPPETTNTSVFCVDRNGCCNFTTVQAAVDAVPNLSFKRNLIWINAGIYYEKVMVPKSKPNVTFQGQGYTTTAIVWNDTANSSHGTFYSGSVQVFSSNFIAKNISFMNVAPIPGPGDIGAQAVAIRIGGDQAAFWSCGFFGAQDTLHDDRGRHYFKDCYIQGSIDFIFGNGRSFYESCQLISMANPVPQGSKFVNGAVTAHGRASADENSGFVFVNCSIGGTGRVWLGRAWRPFSRVVFANTVMTDIIAAEGWNDFNDPARDQTIFYGEYNCSGAGANMSSRAPFVQRLNDTQVSSFLNLSFIDADQWLQPYSLF 393
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 29214877 29219519 - CaPI482276_07g014570.1 Cam07g1457 131750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam07g1457 393 Gene3D - 88 392 IPR012334 -
Cam07g1457 393 FunFam Pectinesterase 84 392 - -
Cam07g1457 393 SUPERFAMILY Pectin lyase-like 88 390 IPR011050 -
Cam07g1457 393 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 67 388 - GO:0030599(PANTHER)|GO:0045490(PANTHER)|GO:0052689(PANTHER)
Cam07g1457 393 ProSitePatterns Pectinesterase signature 2. 238 247 IPR033131 -
Cam07g1457 393 Pfam Pectinesterase 92 383 IPR000070 GO:0030599(InterPro)|GO:0042545(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam07g1457 Cam-Chr7:29214877 Cam10g1934 Cam-Chr10:33372362 1.90E-75 dispersed
Cam07g1457 Cam-Chr7:29214877 Cam08g1965 Cam-Chr8:25531456 3.80E-68 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam07g1457 - - - 0.0