Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam07g1470 ATGCTTCGCAGCTTAATTCCTCATTCTCCCATCAATTCCACCTCCAATTCCCCATCCTCCATGAACTCCAAACGCTCCGACCCCGACTCCTCCCCCGACCACCCTTCTTCCAAGAGGCTCAATTCACGTCCCAACAACTTCTCCGCCCCCGGTAAGGCCGTCCACCACCCAGACTTCGACGAAGACCAAGAGGACCCACCTCTCGTCGACGGCAGTGACTCCACTGGTTTGAGATTGCTAGGGCTTCTCCTTCAATGCGCCGAGTGCGTCGCCATCGATAATCTCCAGGAGGCCAACGATCTCTTGCCGGAGATCTCCGAGCTCTCCTCGCCCTTCGGAACCTCGCCTGAGCGAGTCGGCGCGTACTTCTCCCACGCGCTTCAAGCCAGAGTTATAAGCTCCTGCTTGGGAACATACTCGCCGTTAACCATCAGAACGTTGAATCAAACTCAGTCGCAGAGAATTTTCAACGCCCTCCAATCCTACAATTCCATCAGTCCGTTGATTAAGTTCTCTCACTTCACCGCCAATCAAGCCATCTTCCAAGCCTTGGACGGTGAAGATCGAGTCCACGTGATCGACCTCGACGTAATGCAAGGTCTCCAATGGCCTGGATTGTTCCACATCCTCGCTTCCCGGCCAAAGAAGATCCAATCCCTACGAATCTCCGGCTTCGGATCCTCTTCCGAGTTGCTTCAATCAACCGGAAGAAGACTGGCGGATTTTGCAACTTCTCTAGGTCTCCCCTTCGAATTCCATCCAGTGGAAGGCAAAATCGGAAACATAACAAACCCCAATCAACTGGAATTGAGAGCCGGCGAGACAGTTGTAGTTCACTGGATGCACCATTGCTTATACGACGTAACAGGAAGCGATATAGGTACGCTTAGATTACTTTCAACTCTAAAACCAAAACTAATCACCATTGTTGAACAAGATCTGAGTCATGGAGGTAGTTTTTTAGGAAGATTTGTAGAGGCTCTTCATTATTACAGCGCGTTATTCGACGCGCTTGGTGATAGTTTAACCATGGATAATCTGGAAAGACATGTGGTAGAGCAACAATTGTTTGGTTGTGAGATTAGGAACATTATCGCCGTTGGTGGACCCAAAAGAACCGGTGAAGTTAAAGTCGAAAGATGGGGCGATGAACTGAAACGGGTCGGGTTTAAACCCGTTTCTCTTGGAGGTAACCCGGCTGCTCAAGCCAGTTTACTTCTTGGAATGTTTCCTTGGAAAGGCTATACTCTTGTTGAAGAAAATGGGTGCCTTAAACTTGGATGGAAGGACTTATCTCTTCTCACAGCCTCCGCCTGGCAGCCCTCCGATTGA 1332 49.85 MLRSLIPHSPINSTSNSPSSMNSKRSDPDSSPDHPSSKRLNSRPNNFSAPGKAVHHPDFDEDQEDPPLVDGSDSTGLRLLGLLLQCAECVAIDNLQEANDLLPEISELSSPFGTSPERVGAYFSHALQARVISSCLGTYSPLTIRTLNQTQSQRIFNALQSYNSISPLIKFSHFTANQAIFQALDGEDRVHVIDLDVMQGLQWPGLFHILASRPKKIQSLRISGFGSSSELLQSTGRRLADFATSLGLPFEFHPVEGKIGNITNPNQLELRAGETVVVHWMHHCLYDVTGSDIGTLRLLSTLKPKLITIVEQDLSHGGSFLGRFVEALHYYSALFDALGDSLTMDNLERHVVEQQLFGCEIRNIIAVGGPKRTGEVKVERWGDELKRVGFKPVSLGGNPAAQASLLLGMFPWKGYTLVEENGCLKLGWKDLSLLTASAWQPSD 443
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 29348653 29349984 - CaPI482276_07g014700.1 Cam07g1470 131763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam07g1470 443 MobiDBLite consensus disorder prediction 7 26 - -
Cam07g1470 443 Pfam GRAS domain family 81 440 IPR005202 -
Cam07g1470 443 ProSiteProfiles GRAS family profile. 70 440 IPR005202 -
Cam07g1470 443 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 45 439 IPR005202 GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0043565(PANTHER)|GO:0048366(PANTHER)|GO:0090610(PANTHER)
Cam07g1470 443 MobiDBLite consensus disorder prediction 1 72 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam04g0509 Cam-Chr4:18443988 Cam07g1470 Cam-Chr7:29348653 1.60E-133 dispersed
Cam07g1470 Cam-Chr7:29348653 Cam09g0800 Cam-Chr9:8169859 3.70E-88 dispersed
Cam07g1470 Cam-Chr7:29348653 Cam10g2080 Cam-Chr10:34543467 2.90E-40 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
52333 PF03514 GRAS 4.10E-116 CL0063 Cam TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam07g1470 K27742 - csv:101212169 743.036