Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam07g1496 ATGCCAACGGGCGTGCGCGTGGTGGGGCTTATGCGCGCACCGGCCCCAACCATCAGCGCCGCTTCTCTCATTCTCTTCTTTCTCCTCCTCCTCTCATCTTCATGCATAATGGTGGTGTTGTCGGCCTCAGACGCCGAAACACTGCTTCAATTCAAGCGGTCATTGACGTCAGCAGTGGCTCTTAACAACTGGAACCCATCGGTCCCTCCTTGCGAGAACAACAAGGCCAATTGGGCGGGTGTGCTTTGTTTGAATGGACATGTTAGGGGTCTAAGGCTTGAGAATATGGGGCTTAAGGGAGAGGTTGATGTGAATTCGTTGGTTTCTATGACTCGCTTGAGGACACTGAGCTTCATGAACAACACATTGGTTGGGGGTTGGCCTCGTGTCATAAGCAAATTAGGGAGTCTACGTTCTGTTTATCTTTCCTATAACCATTTTTCAGGACAAATCCCAGACGATGCTTTTGCGGGTATGAAATTTTTGAAGAAAGTGTTTTTGACCAATAATGAATTCAACGGCCCCATTCCCTCATCTCTCGCTTCACTGTCTAGGCTTATGGAGTTGAGACTTGATGGAAACAAATTCAAAGGCCAAGTCCCTCGATTTCAAATCGATACTTTGAAGAAACTTAATGTTTCCAACAATGAATTGGAGGGCCCAATTCCTAGTAGCTTATCCCATATGGATCCTTCCTGCTTTGCAGGTAACCGTGATCTGTGTGGGGATCCTCTACCAGCATGTGGGAGTGCTATATCATCCTCAGGGCTTCTAAAAATCGCAGTGATAGTGATAATTTTGGGGTTAACATTAGCAGTAATAGCTGCAATATTCATCATAATGAATATAAGGAAGCAGCCAGCAGCGGTGCAACTGGGGAAGGGGAATCCAGGGATTATCATTGAAGAGGATCAGAACAAATACATGAATAATGGTAAGCAAATGGCGGCGGGGGCGGGGGATGGATACAGATCGACGGAGTCGTCGGTGGCTCAGGCTCCGAAGAGAGGGGCAGAACATGGGAAACTGTTGTTCGTGAGAGATGATAGGGAGAAGTTCGATTTACAAGACCTGCTAAGAGCGTCGGCGGAGATATTGGGGAGTGGCTCATTCGGGTCTTCTTATAAAGCAACTATACTTTGTAATGCGGTGGTGGTGAAGCGTTACAAGCATATGAACAACGTGGGAAGAGAGGAGTTTCATGAGCATATGAGAAGGCTAGGTAGATTGACGCATGCAAATCTACTCCCTTTGGTTGCATATTATTACAGGAAGGAAGAGAAGCTCTTGATTTCCGACTTTGTGGATAATGGGAGTTTGGCCAGCCATCTGCATGGGAACCACAACCTGGAGGAGGCAGGGCTGGATTGGGCAACTAGATTGAAGATCATCAGAGGAATAGCAAGAGGGTTGTCTTACTTGTACACATCGCTGCCAAACATAGTAGCAGCACATGGGCATCTGAAATCTTCAAATGTGTTACTAGACGAGTCGATGGAGCCTCTGCTGACGGATTACGGTCTAAGCCCAGTAGCGAACCTAGAGCAGGGGCAGAGCCTGATGATGGCCTACAAATCCCCAGAGTACGCCCAAATGGGGCGCATAACCAAGAAAACGGACGTGTGGAGCTTCGGAATTGTGATTCTGGAGATGTTGACGGGTAGGTTCCCAGAGAATTACCTAACTCGGAATCACGACACCAAAGCTGACCTGGCGGGTTGGGTCAACAACATGATCAAGGAAAAGAAGACCCCGCAAGTGTTCGACGCAGAGCTAGGGCGAGCCAGGGAGAGCAATAAAGGCGAGTTGCTGAAGATGCTTAAGATTGCATTGAGTTGTTGCGAGGAAGATGTGGATAGAAGGTTGGATCTCAATCAAGTAGTCGCACAAATTGAAGACTTGAACGATGCAGATTTTAGTGATAATGATGATGGAGATAACTTCTCCCCCACTTCTCGCCATTCTCAAATTCCTGTTTGA 1980 47.47 MPTGVRVVGLMRAPAPTISAASLILFFLLLLSSSCIMVVLSASDAETLLQFKRSLTSAVALNNWNPSVPPCENNKANWAGVLCLNGHVRGLRLENMGLKGEVDVNSLVSMTRLRTLSFMNNTLVGGWPRVISKLGSLRSVYLSYNHFSGQIPDDAFAGMKFLKKVFLTNNEFNGPIPSSLASLSRLMELRLDGNKFKGQVPRFQIDTLKKLNVSNNELEGPIPSSLSHMDPSCFAGNRDLCGDPLPACGSAISSSGLLKIAVIVIILGLTLAVIAAIFIIMNIRKQPAAVQLGKGNPGIIIEEDQNKYMNNGKQMAAGAGDGYRSTESSVAQAPKRGAEHGKLLFVRDDREKFDLQDLLRASAEILGSGSFGSSYKATILCNAVVVKRYKHMNNVGREEFHEHMRRLGRLTHANLLPLVAYYYRKEEKLLISDFVDNGSLASHLHGNHNLEEAGLDWATRLKIIRGIARGLSYLYTSLPNIVAAHGHLKSSNVLLDESMEPLLTDYGLSPVANLEQGQSLMMAYKSPEYAQMGRITKKTDVWSFGIVILEMLTGRFPENYLTRNHDTKADLAGWVNNMIKEKKTPQVFDAELGRARESNKGELLKMLKIALSCCEEDVDRRLDLNQVVAQIEDLNDADFSDNDDGDNFSPTSRHSQIPV 659
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 29585541 29589244 - CaPI482276_07g014960.1 Cam07g1496 131789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam07g1496 659 FunFam pollen receptor-like kinase 1 329 434 - -
Cam07g1496 659 MobiDBLite consensus disorder prediction 644 659 - -
Cam07g1496 659 SUPERFAMILY L domain-like 68 230 - -
Cam07g1496 659 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 35 - -
Cam07g1496 659 Gene3D Ribonuclease Inhibitor 157 249 IPR032675 -
Cam07g1496 659 Pfam Leucine rich repeat N-terminal domain 42 83 IPR013210 -
Cam07g1496 659 Pfam Leucine Rich Repeat 136 154 IPR001611 GO:0005515(InterPro)
Cam07g1496 659 Pfam Leucine Rich Repeat 208 229 IPR001611 GO:0005515(InterPro)
Cam07g1496 659 Gene3D Phosphorylase Kinase; domain 1 326 434 - -
Cam07g1496 659 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 39 635 IPR046959 -
Cam07g1496 659 Gene3D Ribonuclease Inhibitor 43 156 IPR032675 -
Cam07g1496 659 Pfam Protein tyrosine and serine/threonine kinase 364 630 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam07g1496 659 Gene3D Transferase(Phosphotransferase) domain 1 435 651 - -
Cam07g1496 659 SUPERFAMILY Protein kinase-like (PK-like) 364 633 IPR011009 -
Cam07g1496 659 FunFam Pollen receptor-like kinase 1 435 645 - -
Cam07g1496 659 MobiDBLite consensus disorder prediction 636 659 - -
Cam07g1496 659 ProSiteProfiles Protein kinase domain profile. 360 634 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam07g1496 Cam-Chr7:29585541 Cam08g1711 Cam-Chr8:23412512 1.80E-107 dispersed
Cam01g0211 Cam-Chr1:2408086 Cam07g1496 Cam-Chr7:29585541 2.30E-51 wgd
Cam05g1028 Cam-Chr5:9281237 Cam07g1496 Cam-Chr7:29585541 1.20E-50 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85334 PF07714 PK_Tyr_Ser-Thr 2.00E-30 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam07g1496 K28077 - csv:101203276 1118.22