Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam07g1500 ATGGATTCTTCAATTTCCTCATTCCTTCTGTTCTTTTCCTTTTCCCTTCTCTTCATATTTGGTAATTCCTTCGATTTCTACAGCTCCTGCAGCAATCTCTTCAACTGCGGCCACATCACCAACGTCGGCTTCCCATTCTGGGGCGACGGAAGGCCTGCCGGCTGCGGCAATCCGGCGCTGCAATTGGCATGCGAAGGAAATAAGACAACGATCGTAATAAAGGAAATCAAATATCAGATTCTCAAATTCAGCGTCGAAAATAATTCCCAAACCCTCACCATCGCCAGAGCCGATTATATGGGTACCCTCTGCCCTAAGAAATTCATCAACACCACAATCGATTACAATCTCTTCGATATAATTCCTACTTACCGCAACATCACCTTGCTATATTGCTCCTCTTCTCCTCTCGCCGGGCAATTTAACTGTCCTGGATATGAGTTCGGCTTCATTGAGGGGAGCCCCATAGGTCCTAGTCTCTGCAATGTTAGCGTGATCGTGCCGGTTTCTTTGAATTTCTTCCCGCCGGTAAGTGATATTGTGAACGCTACTGAGATGTCGATGGCCATCGACGAGGGATTTGAGGTGAGTTTGAAGGATGACGGCGGTGGATGTGGAATTTGTAAGCAGTCGGAGGGGGTTTGCGGTTACGATTTGAGTTCGAATCGGACGACTTGCTATTGTCGCGCCGGCGATTCTATTGATAACGGAGCTTGTAGGAGGCTTCCGGCCGGTGGAGGTCCGGCATCTTCTCCGGGTGGGAATGGATCTAAGAATACATCCCTGATAATAGGCCTTTCTATTGGAGGGGTAACTGTACTAGGCCTATGCTTAGGATGCTTTGCCTTCTACATTACACAACGCAGAAAAAAACATGTTATGAAGTTGAAAAGCAAAGATCTTTCTTCACCTCCTTCAAGTGGAGGCATTCTGACTCCCTCCACCTTTCGCTCTAATAGTATTCCTTCCTATCCTTATTCGAGATCTAATCTCGAAAACGGGAGCTCCTACTTTGGAGCTCAAATCTTTACCTATGCCGAACTCGTGGAAGCAACTCATAATTTTGACCGTTCAAGGGAACTTGGAGATGGTGGTTATGGTACTGTTTACTCTGGAACACTTAGGGATGGAAGGATAGTTGCAGTAAAGCGGCTATACGAGAACAATTATAAACGCGTGGAGCAGTTCACAAATGAAGTTGAGATTCTCTCAAAATTGCAACATCCGAACCTCGTGAAGCTTTACGGATGCACATCGAGACATAGCCGAGAACTCCTCCTTGTATATGAGTACATTCCTAATGGAACAGTGGCTGACCATCTTCATGGAAAACAAGCAAATTCAGGTCTCCTTAGTTGGTCTGTTAGGCTCAAGATTGCTATAGAGACAGCTAATGCACTGGCTTACCTCCATCGCAACGATATCATTCATCGTGATGTCAAGACCAATAACATTCTTCTTGACAACAACTTCAAAGTAAAAGTGGCTGATTTCGGCCTGTCACGGTTATTTCCCCTTGACGTTACTCATGTTTCAACTGCTCCGCAAGGGACACCAGGCTATGTTGATCCCGAATATTATCAATGCTACCAACTTACCGACAAGAGCGACGTGTATAGCTTTGGAGTTGTTTTGGTTGAGCTTATATCGTCGCTGCAGGCAGTTGACATCAACAGGAACAGAAATGATATCAATTTGTCAAATATGGCTATTGATAGAATTCAAAATCATGCATTGGCTGATTTAGTTGATCCAGATCTTGGGTTTGATAGGGATTATGCAGTAAGGTGTATGATAAAGTCAGTGGCAGAGTTGGCTTACCGATGTCTTCAACAGACAAGGGATGTGAGGCCTTCTATGGATGAAGTGCTGGAAATTCTAAAAGAATTAGAGAATGAAGAACTGACTGCTCGTAAAGCAGAAGTGCTAGATATAGGGTCTGATAATGTGAGACTTTTAAGGAATACATTATCTCTGCTTTCACCAGATTCTGCACCAGTGACAGATAAATGGGTGAAGGTCTTGAACAGAACAACTTAA 2040 44.36 MDSSISSFLLFFSFSLLFIFGNSFDFYSSCSNLFNCGHITNVGFPFWGDGRPAGCGNPALQLACEGNKTTIVIKEIKYQILKFSVENNSQTLTIARADYMGTLCPKKFINTTIDYNLFDIIPTYRNITLLYCSSSPLAGQFNCPGYEFGFIEGSPIGPSLCNVSVIVPVSLNFFPPVSDIVNATEMSMAIDEGFEVSLKDDGGGCGICKQSEGVCGYDLSSNRTTCYCRAGDSIDNGACRRLPAGGGPASSPGGNGSKNTSLIIGLSIGGVTVLGLCLGCFAFYITQRRKKHVMKLKSKDLSSPPSSGGILTPSTFRSNSIPSYPYSRSNLENGSSYFGAQIFTYAELVEATHNFDRSRELGDGGYGTVYSGTLRDGRIVAVKRLYENNYKRVEQFTNEVEILSKLQHPNLVKLYGCTSRHSRELLLVYEYIPNGTVADHLHGKQANSGLLSWSVRLKIAIETANALAYLHRNDIIHRDVKTNNILLDNNFKVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYYQCYQLTDKSDVYSFGVVLVELISSLQAVDINRNRNDINLSNMAIDRIQNHALADLVDPDLGFDRDYAVRCMIKSVAELAYRCLQQTRDVRPSMDEVLEILKELENEELTARKAEVLDIGSDNVRLLRNTLSLLSPDSAPVTDKWVKVLNRTT 679
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 29635599 29641065 - CaPI482276_07g015000.1 Cam07g1500 131793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam07g1500 679 Coils Coil 620 640 - -
Cam07g1500 679 Gene3D Phosphorylase Kinase; domain 1 328 431 - -
Cam07g1500 679 CDD STKc_IRAK 361 630 - -
Cam07g1500 679 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 332 431 - -
Cam07g1500 679 ProSiteProfiles Protein kinase domain profile. 355 635 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam07g1500 679 Gene3D Transferase(Phosphotransferase) domain 1 432 644 - -
Cam07g1500 679 Pfam Protein kinase domain 356 625 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam07g1500 679 SUPERFAMILY Protein kinase-like (PK-like) 336 631 IPR011009 -
Cam07g1500 679 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 24 672 IPR044652 GO:0004672(InterPro)|GO:0016301(PANTHER)|GO:0016310(PANTHER)
Cam07g1500 679 FunFam Wall-associated receptor kinase-like 20 432 640 - -
Cam07g1500 679 ProSitePatterns Serine/Threonine protein kinases active-site signature. 475 487 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam07g1500 679 Pfam Wall-associated receptor kinase galacturonan-binding 30 95 IPR025287 GO:0030247(InterPro)
Cam07g1500 679 ProSitePatterns Protein kinases ATP-binding region signature. 361 383 IPR017441 GO:0005524(InterPro)
Cam07g1500 679 SMART serkin_6 355 626 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam07g1500 679 Pfam Wall-associated receptor kinase C-terminal 160 230 IPR032872 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam05g2453 Cam-Chr5:32426201 Cam07g1500 Cam-Chr7:29635599 5.10E-128 dispersed
Cam05g2674 Cam-Chr5:34163468 Cam07g1500 Cam-Chr7:29635599 8.20E-73 dispersed
Cam07g1500 Cam-Chr7:29635599 Cam08g2016 Cam-Chr8:25870316 7.20E-83 dispersed
Cam07g1500 Cam-Chr7:29635599 Cam11g0777 Cam-Chr11:9756761 3.60E-175 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85335 PF00069 Pkinase 3.50E-50 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam07g1500 - - - 0.0