Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam07g1520 ATGCAAGAGAACAGATACAAAGGCGGACACAATTGTGGTGGCGAATGTTACTTCGTTTTCATGAACTATGATCCTCAATATGAACGTCTTCGGGCTGATCGATCTGGGGAAGGGGCAAATGAGCTTGATGTGTATCTGAGTAGAAAGCATGATGAGATTCTGGGGAGGTGGTTGGAGCCCGGAAGTTACAGAAAAATCTCCTCTTTTCTAATCGTTGACGGATTTTCGGTCGAGATTACTGAAAATCAGGCAAAAGTGCTTAGATGTGCAGAGGGAGTGAGGGTGGTGGAGAAGAATGAAGACCAGCCTCTCATTAATGAGAAAAAAAAGGTGTGA 336 44.35 MQENRYKGGHNCGGECYFVFMNYDPQYERLRADRSGEGANELDVYLSRKHDEILGRWLEPGSYRKISSFLIVDGFSVEITENQAKVLRCAEGVRVVEKNEDQPLINEKKKV 111
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 29808520 29809809 - CaPI482276_07g015200.1 Cam07g1520 131813

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cam07g1520 111 PANTHER OS01G0220500 PROTEIN 15 101 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam07g1520 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam07g1520 Cam-Chr7:29808520 Cam11g1205 Cam-Chr11:24014317 2.00E-06 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi2g120 Blo02g01146 . . Bda08g00471 Bpe05g00689 . . . . Cmo16g00602 . . . . . Cpe14g00466 . . . . . . . . Cla07g01419 Cam07g1520 Cec07g1616 Cco07g1576 Clacu07g1508 Cmu07g1478 Cre07g1855 . . Cone6ag0846 Cone9ag0843 . . . . . . . . . . Bma05g00871 . . . . . Cma16g00551 . . . . . . . . . . . . . . . . . . . Csa04g00649 Chy07g01161 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0010675 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 1 2 1 1 1 1 1 1 1 1 32