Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam07g1545 ATGATTGCGAGCTCTCTTTGCAATGCTTCCGCTAAATTCCCGGCAGAAGTGATGGACGTAGAAACGATGATGGAACAGAAGAGGAGTCTATGCTCTGTTGATGAGAGCGCTCTCACTTCTCTTACATCCAAGCGACCCAAGACTGATTTCTCTATCTCCTCTAAGGAGAGGAAAGACAAACTGGGTGAACGAATTATGGCCTTGCAACAACTTGTTTCACCATACGGAAAGACAGATACGGCATCTGTTCTTCTGGAGGCAATGGAATATATCCAATTCCTTCACGAGCAAGTCAAGGTGTTGAGTGCTCCATATCTCCAAAGCACACCCACTGTTTTGTTGCAGGAGCTGGAGGCATGCAGCCACAGCCTGAGGAGCAGAGGCCTATGTCTTGTTCCAATCTCGTGTACTGCTGGAGTTGCGCGCAGCAACGGTGCAGATATTTGGGCTCCTGTGAAGACAATTTCCCCCAAATTTGAGAAGCCTATCTCACCATTCAATTGA 504 47.62 MIASSLCNASAKFPAEVMDVETMMEQKRSLCSVDESALTSLTSKRPKTDFSISSKERKDKLGERIMALQQLVSPYGKTDTASVLLEAMEYIQFLHEQVKVLSAPYLQSTPTVLLQELEACSHSLRSRGLCLVPISCTAGVARSNGADIWAPVKTISPKFEKPISPFN 167
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 30117012 30121108 + CaPI482276_07g015450.1 Cam07g1545 131838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam07g1545 167 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 44 138 IPR045843 GO:0000978(PANTHER)|GO:0000981(PANTHER)|GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0006355(InterPro)|GO:0006357(PANTHER)
Cam07g1545 167 FunFam Transcription factor bHLH113 family 44 120 - -
Cam07g1545 167 Gene3D - 42 124 IPR036638 GO:0046983(InterPro)
Cam07g1545 167 SMART finulus 53 100 IPR011598 GO:0046983(InterPro)
Cam07g1545 167 CDD bHLH_AtbHLH_like 51 102 IPR045239 -
Cam07g1545 167 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 50 108 IPR036638 GO:0046983(InterPro)
Cam07g1545 167 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 45 94 IPR011598 GO:0046983(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam07g1545 Cam-Chr7:30117012 Cam11g0081 Cam-Chr11:2512765 4.30E-21 dispersed
Cam07g1545 Cam-Chr7:30117012 Cam10g0555 Cam-Chr10:8198150 3.80E-25 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam07g1545 - - - 0.0