Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam07g1557 ATGGAGAAAAACCCACCCCCAGAAAAGTCTGAAAGTTTTTCTAAAAATTTCAATAGAAGGATTGCTAATTTGGGCTCACCTCGACGGACTCCCGACGCTGCTGCTGCTGATGCTAAATCAGATTCCGAAAAGCTTGCTGCTGATCGAGATGATGATGCCTTCATTGAAGACCCTCTTTCCGAATCTGATACGGCCTTGATTTTTGAAGAGGTTGATCGATTCCTCGAGACTTTGTCCAATGTTGGAGACGATGGATCGAATCTAATCCATGAAATTCCGAGCTCCATTCATTCGTTGTCGAAAATGGTGGACTCCATGATCTCCAGGTACAATTCTAACAAATACCCGGCGAAGCTTGGCAAAGATCCCGACCGGGATTCTTCCTTTTTTGAAGCTTTAGGTCGCATTTCCAAGATTGCTATTAAATTAAGCGAATTCCCTACCAGCACTGCCTCGATTCCTTCTCTCAATCGAACCACCACGGCTCTACAGCGAGCGATGTCGTTGTTGGATGAAGAATTCAATGCCCTTTTGAAAGAATGCAAACATCGAGAGCTAGATTCGAAACCTGACAAGAAAGCATCAAAGCAGTCGTCGTTCAAAACAATCAACGAATCAGCAGATCAACAAAACAGCACCATTCCTGAGTCATCCGAGTCCGATTCTGCTAAGGAAGAGATATTCCCCTCTTTCTCGCAGGAAACTATATCAAATATGAAAAGAATTGCCGGAGCAATGATCTCTGCTGGCTACGAGAAGGAATGTTGTATGAGTTACAGCTTCCTCCGGCAGAGCTCGTTCAAAGGAATATTGAACAAGCTAGGGTACGAAAGTATTAGCATAGACGAGATTCAAAAAATGCAATGGGAGACTCTTCAATCAGAAATCGACAAATGGATCGCCGTCGTCAAGAAATGCTCAAAATCTCTGTTCCCAGGCGAGTGGAAGCTTTGTGATTCTGTTTTCACCGATTATCCCTTCATTTCTCATACGCTCTTCAGCAATTTAACAAGAGCAGTAGTCATCAAACTTCTCAACTTCGCAAACGCCGTCGTTTTGACAAAACGATCCGCAGAGAAGATGTTCAAATTACTTGACATGTACGAAACAATCCGAGATTTAATTCCGGCCATCAATGGCTTCCCCGAAAATTGCAGAACAGAGCTAATTTCCGAAGCGGAAGGGGCAAAAAGTGGTATAGGCGAAGCAATAGTCGGCATTTTCTATGACCTAGAGAGCTCAATCAAAAGCGACAACGCGAAAATTCCAGTTCCAGGAGGAGCAGTTCATCCATTGACGCGCTACATAATGAATTACCTAAAATATGCTTGCGAGTACAAAGAAACCCTAGAACAGGTCTTCCAATTTCTCGACCCAAAAGTTGAAGAAGACCGACCGGCAAGAATGGACGAGAACGACGACGCGTCGCCGAGAAAGTCTCAGCTCGCAATTCAGATTGCAATGGTGATGGATCTACTCGACGCGAATCTCACAATGAGATCGAAACTATACCGCGACGCATCTCTTCGGTACATCTTCCTGATGAACAACGGAAGGTACATAGTACAGAAAATCAAAGGCTCAAGCGGAATTACCGAGTTGATGGGCGACCGTTGGTGCCGTAAACGATCGACGAATCTGCGACAATACCACAAAAATTACCAGAGAGAAACATGGAGTAAGGTATTGCAGTGCCTAAGCCACGAAGGATTGCTGGTGAACGGGAAGGTATCGAAGCCAATATTGAAGGAGAGATTCAAAAGTTTCAACGCGATGTTCGACGAAATACACAAAACGCAAAGCAGTTGGGTAGTGAGTGACGAGCAGCTTCAATCGGAGCTTAGGATTTCGGTGTCGGCGGTGATGATTCCAGCGTACCGTTCGTTCGTTGGGAGATTCAAGCAGCATTTCGATCCGGGAAGACAATCGGAGAAGTACATAAAGTATCAACCTGAAGACATTGAAGGTTTGATCGATGACCTGTTTGATGGAAATACTGCTTCCATGGGGAGAAGAAGAGCGTAG 2025 44.79 MEKNPPPEKSESFSKNFNRRIANLGSPRRTPDAAAADAKSDSEKLAADRDDDAFIEDPLSESDTALIFEEVDRFLETLSNVGDDGSNLIHEIPSSIHSLSKMVDSMISRYNSNKYPAKLGKDPDRDSSFFEALGRISKIAIKLSEFPTSTASIPSLNRTTTALQRAMSLLDEEFNALLKECKHRELDSKPDKKASKQSSFKTINESADQQNSTIPESSESDSAKEEIFPSFSQETISNMKRIAGAMISAGYEKECCMSYSFLRQSSFKGILNKLGYESISIDEIQKMQWETLQSEIDKWIAVVKKCSKSLFPGEWKLCDSVFTDYPFISHTLFSNLTRAVVIKLLNFANAVVLTKRSAEKMFKLLDMYETIRDLIPAINGFPENCRTELISEAEGAKSGIGEAIVGIFYDLESSIKSDNAKIPVPGGAVHPLTRYIMNYLKYACEYKETLEQVFQFLDPKVEEDRPARMDENDDASPRKSQLAIQIAMVMDLLDANLTMRSKLYRDASLRYIFLMNNGRYIVQKIKGSSGITELMGDRWCRKRSTNLRQYHKNYQRETWSKVLQCLSHEGLLVNGKVSKPILKERFKSFNAMFDEIHKTQSSWVVSDEQLQSELRISVSAVMIPAYRSFVGRFKQHFDPGRQSEKYIKYQPEDIEGLIDDLFDGNTASMGRRRA 674
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 30248421 30250445 - CaPI482276_07g015570.1 Cam07g1557 131850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam07g1557 674 SUPERFAMILY Cullin repeat-like 118 663 IPR016159 -
Cam07g1557 674 MobiDBLite consensus disorder prediction 1 15 - -
Cam07g1557 674 MobiDBLite consensus disorder prediction 185 225 - -
Cam07g1557 674 MobiDBLite consensus disorder prediction 1 54 - -
Cam07g1557 674 Pfam Exo70 exocyst complex subunit C-terminal 298 660 IPR046364 GO:0000145(InterPro)|GO:0005546(InterPro)|GO:0006887(InterPro)
Cam07g1557 674 Gene3D Exocyst complex component Exo70 113 672 - -
Cam07g1557 674 MobiDBLite consensus disorder prediction 199 225 - -
Cam07g1557 674 PANTHER EXOCYST COMPLEX PROTEIN EXO70 100 665 IPR004140 GO:0000145(PANTHER)|GO:0000145(InterPro)|GO:0006887(InterPro)|GO:0006887(PANTHER)
Cam07g1557 674 MobiDBLite consensus disorder prediction 34 53 - -
Cam07g1557 674 FunFam Exocyst subunit Exo70 family protein 112 670 - -
Cam07g1557 674 Pfam Exocyst complex component Exo70 N-terminal 101 180 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam01g0878 Cam-Chr1:10264630 Cam07g1557 Cam-Chr7:30248421 9.40E-174 dispersed
Cam07g1557 Cam-Chr7:30248421 Cam07g1654 Cam-Chr7:31101491 1.70E-71 dispersed
Cam07g1557 Cam-Chr7:30248421 Cam03g0199 Cam-Chr3:2957541 5.50E-67 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam07g1557 K07195 - csv:101220402 1243.41