Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam07g1578 ATGCAAGAAGCTTTTCTTAATTTGTATTTAACAATGGCGGTTGGGAGTACTGTATCAGTTTTCTGCTCTTCTTCCTTAACTCTTCTTCTTCTTCTTCTGCTGCTCGTATTTCCATTTGGGTCTAATTCTGAGGATCTAAAAGCTTGCAAGTTTGATGCCATATTTCAGTTTGGGGATTCCTTAGCCGACACTGGAAATCTGATACGAGAGAACCCTTCAACTCCTTTTTCTCATCTTCCTTATGGCGAAACGTTCTTTAAGAAAGCCACTGGAAGATGTTCTAATGGCTTACTTATGGTCGATTACTTTGCTTTGGCAGCGGGGCTTCCTTTGGTGAATCCCTACTTGAAAAAGAAGGCATCTTTTAATCATGGAGTGAATTTTGCAGTGGCTGGCTCTACTGCTTTGCCTTTGAATGTTCTTGCTCAAAACAACATCTCATCTCCGGTTACCAACACATCTTTGAGTAAACAACTTGAATGGATGCATTCATATCTCAATACTATTTGTTCTAACAAAAGAGATTGTACTAAGAAGTTAAAGCATGCATTATTTTTTATGGGGGAGATTGGAGGGAATGATTATAACTATGCTCTATTTGAAGGCAAAACTGTTGCTGAAGTAAAAAATATGGTACCTGGAGTTGTACAAACAATAATAGATGCTACTAGAAGGGTCATCAATTATGGTGCTACTCGAGTTATTATTCCAGGACATTTCTCAATGGGTTGCCTACCAATCTACCTCACTGGCTTTCAAACCAATGATTCAACTGCTTATGACAAGTTTCACTGTTTAAAGGATTTCAACGGTTTAGCAAGTTATCATAATAACAAATTGAAGCAAGCTATCAAGCTGTTGAGAAAAGAGAATCCTAATACCATAATTACATACGGTGATTATTATAATGCATTATTTTGGATTTTTCAACATGCTTCTTTGCTTGGATTTGATAAAACATCCCTACAAAAGTCTTGTTGCGGAACAGGAGGGTCTCAAGGCCTTGAAGTCTCAGCTCAGGGGCTTGGGTGCATGGGCATGTCCTCATACTACGGCCCTGCTCAGCCACAAGAAGACATGATTGCCCTCATCCACCGCGCCGTCGAGGCCGGGGTCACCTTCTTGGATACCTCAGACATATACGGCCCTTTCACCAACGAGACCCTCCTTGGAAAGGCTCTTAAGGCCGATGGGCTTAGGGACAAGGTTCAGTTGGCTACCAAATTTGGGCTCCATCTCGCCCACGGTAACTTCGAGGTCCACGGCCATCCGGCCTATGTTAGGGCCGCGTGTGAGGCCAGCTTGGACCGCCTTGGGGTTCATTGTATCGATCTCTATTATCAGCATCGGATCGATACTAAAGTTCCCATTGAAATCACGATTGGGGAGCTGAAGAAATTGGTTGAAGAAGGGAAAATAAAGTACATAGGTTTATCTGAAGCTTCAGCCTCTACCATTAGAAGAGCTCATGCAGTTCATCCAATTACAGCAGTTCAAATCGAATGGTCTTTGTGGGCCAGAGATGTTGAACAAGATATCATTCCTACTTGCAGGGAACTGGGCATTGGAATTGTGGCATACAGTCCTCTGGGAAGGGGTTTTCTATCTTCTGGGGCCAACTTCATTGAAAACTTAACAGATGATGACTACAGAAAGAAACTCCCTCGATTTCAACCCGAAAACTTGGAGCACAACAAGAGCATATTCGAAAAGGTTAGCGAATTGGCAGCTAGAAAAGGGTGCACCACATCTCAGCTAGCCTTAGCATGGGTTCACCACCAAGGGACCGATGTGGTTCCAATTCCTGGAACCACTAAGCTTAAAAATCTGCAATCAAACATTGAAGCTTTGTCATTGAAACTTACACCACAAGAAATGGCTGAACTTGAAGCCTATGCTTTAGCTGATGGAGTTAAAGGAGACAGATATGGTGATGACATTTCCACTTGGAAACAATCTGAAACCCCACCACTTTCTTCATGGAAATTTTGA 1992 42.37 MQEAFLNLYLTMAVGSTVSVFCSSSLTLLLLLLLLVFPFGSNSEDLKACKFDAIFQFGDSLADTGNLIRENPSTPFSHLPYGETFFKKATGRCSNGLLMVDYFALAAGLPLVNPYLKKKASFNHGVNFAVAGSTALPLNVLAQNNISSPVTNTSLSKQLEWMHSYLNTICSNKRDCTKKLKHALFFMGEIGGNDYNYALFEGKTVAEVKNMVPGVVQTIIDATRRVINYGATRVIIPGHFSMGCLPIYLTGFQTNDSTAYDKFHCLKDFNGLASYHNNKLKQAIKLLRKENPNTIITYGDYYNALFWIFQHASLLGFDKTSLQKSCCGTGGSQGLEVSAQGLGCMGMSSYYGPAQPQEDMIALIHRAVEAGVTFLDTSDIYGPFTNETLLGKALKADGLRDKVQLATKFGLHLAHGNFEVHGHPAYVRAACEASLDRLGVHCIDLYYQHRIDTKVPIEITIGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQIEWSLWARDVEQDIIPTCRELGIGIVAYSPLGRGFLSSGANFIENLTDDDYRKKLPRFQPENLEHNKSIFEKVSELAARKGCTTSQLALAWVHHQGTDVVPIPGTTKLKNLQSNIEALSLKLTPQEMAELEAYALADGVKGDRYGDDISTWKQSETPPLSSWKF 663
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 30515864 30522727 + CaPI482276_07g015780.1 Cam07g1578 131871

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cam07g1578 663 FunFam Probable aldo-keto reductase 4 329 659 - -
Cam07g1578 663 CDD AKR_AKR13D1 331 629 - -
Cam07g1578 663 SUPERFAMILY NAD(P)-linked oxidoreductase 331 635 IPR036812 -
Cam07g1578 663 CDD SGNH_plant_lipase_like 53 331 IPR035669 -
Cam07g1578 663 PANTHER AFLATOXIN B1 ALDEHYDE REDUCTASE 331 643 IPR050791 GO:0004033(PANTHER)|GO:0005737(PANTHER)
Cam07g1578 663 Pfam Aldo/keto reductase family 342 631 IPR023210 -
Cam07g1578 663 Gene3D - 329 659 IPR036812 -
Cam07g1578 663 Pfam GDSL-like Lipase/Acylhydrolase 54 335 IPR001087 GO:0016788(InterPro)
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam07g1578 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam07g1568 Cam-Chr7:30382881 Cam07g1578 Cam-Chr7:30515864 7.00E-151 dispersed
Cam07g1578 Cam-Chr7:30515864 Cam10g0094 Cam-Chr10:2530197 2.00E-125 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g1074 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cone15ag0623 . . . . . . Blo02g00409 . . Bda13g00295 . . . . . . . . . . . . . . . . . . . . Cla07g01481 Cam07g1578 Cec07g1677 Cco07g1638 Clacu07g1569 Cmu07g1537 Cre07g1913 . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0016358 0 0 0 0 0 1 0 1 1 0 1 1 0 0 0 1 0 0 0 1 0 0 0 0 0 0 1 0 0 0 8