Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam07g1589 ATGGGGTTATTCTTGTTGGTGGATTTGGTTGTTTTGTTCTTGAAGAAGATGTGTGGTTGGAGAGGTGGATTGTTTGTGGAATTGGTTGTTTTTGCAGATATGTGTTTGTTGGTGTCGGGTTTAGGTTCAATGTCCCCTGTTGCTGTTTCTTATGGGGAGAAAGGGCCTGTTTTCTGTGGTTTAAAGTCAGATGGGTCTCATCTTGTGAGCTGTTTTGGTTCAAATTCAGCCATAACTTATGGAACCCCTTCTCATTTCCCATTCATTGGTCTCACTGCTGGTGATGGGTTTGTTTGTGGGCTTCTTTTGGATTCCAACCAACCTTATTGTTGGGGAAGCAGTGGCTATGTTCAAATGGGTGTTCCTCAGCCCATGATCAAAGGAGCTCAATACCTGGAAATTAGTGCTGGTGATTATCATCTGTGTGGACTTCGAACGCCTCTGACTGGAAGGCGTAGGAACACTTCGTTTGTCGATTGTTGGGGTTACAACATGACCAGAACCTTTGCTTTTGATGGCCCTATTGAATCGATCTCTGCGGGGTCTGAGTTCAACTGTGGGCTGTTCTCTCTTAATAGAACTGTTTTCTGTTGGGGTGATGAGACAAGCAGCCGGGTAATCAGTTTGATTCCTAAAGATATGAGGTTTCAAAGGATTGCATCCGGTGGATATCATGTTTGCGGAATTTTAGAGGGCGCAAATTCGAGAGCATTCTGTTGGGGAAGGAGCTTAGACATTGAAGAGGAGATCTCAGTAGCATATTCAGGTGAAGGAAATGTAGACTTGGTTCCAGTTGATCCATTAGACTCTGTTGTTGGGGGCAAATTCCATGCTTGTGGAATAAAGAGCTTAGACCGTGGTGTGATTTGTTGGGGTTTTACGGTTAAACCAAGTACTCCAGCACCAGATGGGATTAAAGTTTACGACATTGCAGCTGGAGATTACTTCACCTGTGGAATTCTAGCTGAAAAATCTCTCCTGCCTGTTTGCTGGGGTCTTGGATTTCCTACTTCTCTGCCTTTGGCTGTCTCACCTGGAATCTGTAAAGCGACTCCTTGTGCCCCTGGTTTCTACGAAATTAGCCAAGACAAAGCTCGGTGTAAGTCGCCGAGTTTTCATGTGTGTATGCCCTGCAGTACTGCTTGCCCTCCTGATATGTACCAAAAATTTGAGTGCTCCTCAAAATCTGATAGGCAGTGTGAATATAATTGTTCAAGTTGCTTTTCAAGTGAATGCCTCTCAAACTGCTCATCCATGCTTTCAACTGGCATGATGGGGAAGAAAAATGGGAAGTACTGGCCTACGCAGCAGCTTCCAGTTCTTGTTGCTGAGATTGCTTTTGCTGTGTTTTTGGTAGCTATTGTGTCTTTAACTGCAATCTTATATGTTCGATACAAGTTACGGAATTGCCATTGCTCGGGAAAGGAGTTGAAGTCTAAGAAAAACAAAGGGACTGCCTCTTCCTTCCAGAAGGAAAGCTATAAAATACGTCCTGACTTGGATGAGCTGAAAATAAGGAGGGCTCAGATGTTCACCTACGAAGAACTTGAGAGAGCGACATGTGGGTTTAAGGAAGAGTCTATTGTGGGAAAGGGAAGTTTCTCTTGTGTTTTTCGAGGTGTTTTAAAGGACGGGACAGTCGTAGCAGTAAAACGGGCTATAATGTCTCCCAACATGCAGAAGAATTCAAAGGAGTTCCATACTGAACTTGACTTGCTATCAAGATTAAACCATGCCCATTTGCTTAATCTGCTTGGTTATTGTGAAGAAGGTGGAGAGAGGCTTCTGGTTTATGAGTTCATGGCTCATGGTTCCTTGCATCAGCACCTCCATGGCAAGAACACGGCCTTAAAAGAACAATTAGATTGGATAAGAAGGGTCACAATTGCAGTCCAAGCAGCTAGAGGAATCGAATACTTGCATGGCTATGCTTGTCCTCCCGTCATTCATCGAGACATTAAGTCGTCAAACATTCTCATCGATGAAGAACATAATGCTCGAGTCGCTGATTTTGGCTTGTCATTGTTGGGACCGACTGATAGTAGCTCTCCATTAGCCGAGCTACCAGCTGGGACTCTTGGCTATCTCGATCCTGAATACTATAGACTTCATTACCTTACCACCAAGTCTGATGTGTATAGCTTTGGTGTTTTGCTACTAGAAATTCTCAGTGGTAGAAAAGCCATTGATATGCAATATGAAGAAGGGAACATAGTAGAATGGGCAGTGCCTCTGATAAGATCAGGAGATATCTCTGCAATTTTAGATCCGATATTGAAACCGCCCCCCGATATCGAGGCCTTGAAGAGGATTGCAAATGTAGCCTGTAAATGTGTGAGAATGAGGGCAAAGGAGAGGCCATCAATGGACAAAGTGACAACTGCATTGGAGCGTGCTCTTGCCCAATTAATGGGAAGCCCGTGTAACGAACAACCAATCTTACCAACCGAGGTGGTCTTGGGAAGCAGCAGACTACACAAAAAGTCATCTCAAAGATCATCGAACCATTCAGTCTCCGAAACAGATATAGCAGAAGCTGAGGATCAAAGGTTCGAGTTCAGGGCTCCGTCGTGGATTACATTCCCGAGTGTGACGTCATCGCAGAGGAGGAAATCCTCAGTGTCAGAAGCAGATGTTGATGGAAAGAATTTGGAAGGAAGAAATGTAGGGAATGGTGGAGGTGTTGGGGATGGATTGAAGAGTTTAGAGGAAGAGATTGGGCCTGCTTCCCCTCAAGAAAAGTTGTTCTTGGAGCACAATTTCTAA 2766 44.36 MGLFLLVDLVVLFLKKMCGWRGGLFVELVVFADMCLLVSGLGSMSPVAVSYGEKGPVFCGLKSDGSHLVSCFGSNSAITYGTPSHFPFIGLTAGDGFVCGLLLDSNQPYCWGSSGYVQMGVPQPMIKGAQYLEISAGDYHLCGLRTPLTGRRRNTSFVDCWGYNMTRTFAFDGPIESISAGSEFNCGLFSLNRTVFCWGDETSSRVISLIPKDMRFQRIASGGYHVCGILEGANSRAFCWGRSLDIEEEISVAYSGEGNVDLVPVDPLDSVVGGKFHACGIKSLDRGVICWGFTVKPSTPAPDGIKVYDIAAGDYFTCGILAEKSLLPVCWGLGFPTSLPLAVSPGICKATPCAPGFYEISQDKARCKSPSFHVCMPCSTACPPDMYQKFECSSKSDRQCEYNCSSCFSSECLSNCSSMLSTGMMGKKNGKYWPTQQLPVLVAEIAFAVFLVAIVSLTAILYVRYKLRNCHCSGKELKSKKNKGTASSFQKESYKIRPDLDELKIRRAQMFTYEELERATCGFKEESIVGKGSFSCVFRGVLKDGTVVAVKRAIMSPNMQKNSKEFHTELDLLSRLNHAHLLNLLGYCEEGGERLLVYEFMAHGSLHQHLHGKNTALKEQLDWIRRVTIAVQAARGIEYLHGYACPPVIHRDIKSSNILIDEEHNARVADFGLSLLGPTDSSSPLAELPAGTLGYLDPEYYRLHYLTTKSDVYSFGVLLLEILSGRKAIDMQYEEGNIVEWAVPLIRSGDISAILDPILKPPPDIEALKRIANVACKCVRMRAKERPSMDKVTTALERALAQLMGSPCNEQPILPTEVVLGSSRLHKKSSQRSSNHSVSETDIAEAEDQRFEFRAPSWITFPSVTSSQRRKSSVSEADVDGKNLEGRNVGNGGGVGDGLKSLEEEIGPASPQEKLFLEHNF 921
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 30587390 30590155 - CaPI482276_07g015890.1 Cam07g1589 131882
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam07g1589 921 Gene3D Phosphorylase Kinase; domain 1 494 600 - -
Cam07g1589 921 Gene3D Transferase(Phosphotransferase) domain 1 601 808 - -
Cam07g1589 921 ProSitePatterns Protein kinases ATP-binding region signature. 529 551 IPR017441 GO:0005524(InterPro)
Cam07g1589 921 FunFam Receptor protein kinase CRINKLY4 601 803 - -
Cam07g1589 921 ProSiteProfiles TNFR/NGFR family cysteine-rich region domain profile. 352 400 IPR001368 GO:0005515(InterPro)
Cam07g1589 921 SMART serkin_6 523 800 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam07g1589 921 FunFam serine/threonine-protein kinase-like protein CCR1 493 600 - -
Cam07g1589 921 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN ACR4 36 845 - -
Cam07g1589 921 SUPERFAMILY RCC1/BLIP-II 42 293 IPR009091 -
Cam07g1589 921 MobiDBLite consensus disorder prediction 864 911 - -
Cam07g1589 921 MobiDBLite consensus disorder prediction 824 840 - -
Cam07g1589 921 Pfam Protein tyrosine and serine/threonine kinase 526 795 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam07g1589 921 FunFam Serine/threonine-protein kinase-like protein CR4 40 207 - -
Cam07g1589 921 Gene3D - 42 166 IPR009091 -
Cam07g1589 921 ProSiteProfiles Protein kinase domain profile. 523 800 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam07g1589 921 Gene3D - 167 298 IPR009091 -
Cam07g1589 921 CDD STKc_IRAK 529 798 - -
Cam07g1589 921 MobiDBLite consensus disorder prediction 824 843 - -
Cam07g1589 921 ProSitePatterns Serine/Threonine protein kinases active-site signature. 648 660 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam07g1589 921 SUPERFAMILY Protein kinase-like (PK-like) 505 796 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam04g0830 Cam-Chr4:22557516 Cam07g1589 Cam-Chr7:30587390 8.40E-85 dispersed
Cam07g1589 Cam-Chr7:30587390 Cam08g0694 Cam-Chr8:5472415 1.10E-86 dispersed
Cam11g1374 Cam-Chr11:26437623 Cam07g1589 Cam-Chr7:30587390 5.00E-46 dispersed
Cam07g1589 Cam-Chr7:30587390 Cam07g0268 Cam-Chr7:3768145 7.50E-67 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85337 PF00069 Pkinase 1.30E-43 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam07g1589 - - - 0.0