Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam07g1597 ATGAAGATTGAGGAGATTCTCTTCATCTGCAAGGAATTATCGATCGGAGGATCGAATTTCGATCCCCCAAAGCTCCCCGCAGCCTGTGTTTTTTCTTCTGAGGACCTTGTTAGGTTTGATATACTCGGCCCATTATCGGAGTCGTTGCGTTGCTTTGCTCCTCTTGCCCATCACCGGACTGTCCCGCCGCTGTGTGATTGTGGGCTTCTTTTCGTCGTTGATGAATGTGTTTGTGGTGCTGCAGCGATGGCTAGATCTTTTTTGCAGGTTGCTGCTACGGAAGAGGTTGCTTCTCCTCTCCGAGTTGTTCAGATTGAAGGATTGGTTATATTGAAGATAATCAAGCATTGCAAGGAGTTTTCACCAGCTCTTGTTACTGGGCAACTTCTTGGGTTAGATGTTGGTAGCGTTCTTGAAGTCACTAATTGCTTTCCCTTCCCGACTCGGGAGGAGGATGAGGAGATTGAAGCCGATGGTGCTAATTACCAGCTTGAAATGATGAGATGCTTGAGAGAAGTCAATGTTGACAATAACACTGTTGGATGGTACCAGTCGACCTTCTTAGGTTCATATCAGACTGTAGAGCTGATTGAGACCTTTATGAATTATCAGGAAAATATCAGGCGGTGTGTCTGCATAATTTATGACCCATCAAGGTCTAATCAAGGCGTCTTAGCTCTCAAAGCATTGAAGCTTTCAGATTCTTTTATGGAGCTTTACCGCACTAACAGCTTTACAGGAGAGAAGTTGAGGGAGAAGAACTTATCATGGGTGGATATTTTTGAGGAAATACCTATCAAAGTTTCGAATTCAGCCCTCATTAGTGCTTTTATGACGGAGCTTGAAGCTGACTCTCCAGTCACCCAGTGTGATTATGACCGCCTGCAACTTTCAACAAATCCATTTATGGAGAGGAATGTGGAATTTCTGATTGAATGTATGGATGATTTGTCAGTGGAGCAGCAGAAGTTCCAATTTTATTATCGGAGCCTGACCCGTCAGCAAGCTCAACAACAAGCATGGCTTCAGAAAAGAAGGGCTGAGAACATGATGAGGAAGGCAGCAGGAGAAGAGCCTCTCCCTGAGGAGGATCCTACAAACCCCATCTTTAAACCACTCCCTGAGCCATCACGTTTGGATAGCTATCTCATAACGAATCAAATAGCAAACTATTGCAATCAAATTAATGGTTCTGAGCTTCTTGTTTTAGATCTGAATTTCTCCCTTGAAAAATCAGATGCGGAGCAGGGAGAAGAAGGAAAGGAAGTTTGTGAGCACTTGTCTGCCCGGCTTTGTTGA 1299 44.34 MKIEEILFICKELSIGGSNFDPPKLPAACVFSSEDLVRFDILGPLSESLRCFAPLAHHRTVPPLCDCGLLFVVDECVCGAAAMARSFLQVAATEEVASPLRVVQIEGLVILKIIKHCKEFSPALVTGQLLGLDVGSVLEVTNCFPFPTREEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTFLGSYQTVELIETFMNYQENIRRCVCIIYDPSRSNQGVLALKALKLSDSFMELYRTNSFTGEKLREKNLSWVDIFEEIPIKVSNSALISAFMTELEADSPVTQCDYDRLQLSTNPFMERNVEFLIECMDDLSVEQQKFQFYYRSLTRQQAQQQAWLQKRRAENMMRKAAGEEPLPEEDPTNPIFKPLPEPSRLDSYLITNQIANYCNQINGSELLVLDLNFSLEKSDAEQGEEGKEVCEHLSARLC 432
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 30642150 30650192 + CaPI482276_07g015970.1 Cam07g1597 131890
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam07g1597 432 Pfam C-terminal region of eIF3h 221 396 IPR045810 -
Cam07g1597 432 ProSiteProfiles MPN domain profile. 103 236 IPR037518 -
Cam07g1597 432 Gene3D Cytidine Deaminase, domain 2 73 292 - -
Cam07g1597 432 Hamap Eukaryotic translation initiation factor 3 subunit H [EIF3H]. 98 415 IPR027524 GO:0003743(InterPro)|GO:0005737(InterPro)|GO:0005852(InterPro)
Cam07g1597 432 SMART pad1_6 102 235 IPR000555 GO:0005515(InterPro)|GO:0008233(InterPro)|GO:0008237(InterPro)
Cam07g1597 432 FunFam Eukaryotic translation initiation factor 3 subunit H 82 291 - -
Cam07g1597 432 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 -RELATED 86 354 IPR050242 GO:0003743(PANTHER)|GO:0005829(PANTHER)|GO:0005852(PANTHER)|GO:0008237(PANTHER)|GO:0016282(PANTHER)|GO:0042788(PANTHER)
Cam07g1597 432 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 100 205 IPR000555 GO:0005515(InterPro)|GO:0008233(InterPro)|GO:0008237(InterPro)
Cam07g1597 432 CDD MPN_eIF3h 101 364 IPR027524 GO:0003743(InterPro)|GO:0005737(InterPro)|GO:0005852(InterPro)
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam07g1597 K03247 - csv:101211860 624.394