Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam07g1616 ATGATTATGGCTCTTCCCATTTCCAGATTACTCTCTCTCTTTCCCCTTCTACCCATTTTTCTTGCCTTCTCTACCTTTCTTGTTTCAACAGAAGCATATGATCCACTTGATCCAAATGGAAACATTACTATCAAATGGGATATTATGAGCTGGACTGCTGATGGATATGTTGGTGTTGTTACCCTGTATAATTTCCAACAATACCGGCATATTCAAACACCGGGATGGTCTCTCCAATGGAAATGGGCAAAGAAAGAGGTCATATGGAACATGTTGGGAGGCCAAGCAACAGAGCAAGGTGATTGTTCTAGATTTAAAGGGAACATCCCCCATTGCTGCAAGAGGGATCCAACAGTTGTTGACCTATTGCCTGGAACTCCTTATAACCAGCAGATTGCAAATTGCTGCAAAGGTGGAGTGCTTAACTCCTGGGTGCAAGATCCAGCTACTGCAGTGGGCTCATTTCAGCTCACCGTTGGTTCAGCCGGAACCTCGAATAAAACTGTCCGACTGCCAAAGAACTTTACCTTAAAAGCACCTGGACCTGGTTATACCTGTGGACCAGCCAAAATTGTTAAACCGAGCAAATTCGTTTCCCCCGACAAACGGAGAGTTACACAGGCATTGATGACATGGAATGTTACATGCACATATTCACAATTTCTGGCCCAAAAAACTCCTACTTGCTGTGTCTCGCTGTCATCATTTTACAACGACACAATTGTTTCTTGCCCGAAGTGCTCCTGTGGCTGCCAAGGCAACTTGAATGCACCCCAAAGTTGTGTGGAGCCAAATTCTCCGTATTTAGCCTCTGTTGTTAGCAGTGCTAGTTCTAGCAAGAGCAATTTGACACCATTGGTTCAGTGTACTGGCCATATGTGCCCGATTCGAGTTCACTGGCATGTGAAGCTTAACTATAAGGAGTATTGGAGGGTGAAGATCACAATTACAAACTTCAATTACATGATGAATTATACAAATTGGAACTTAGTTGTTCAACATCCGAACTTCGACAATCTAACACAGATTTTCAGCTTCAACTACCAGTCAATCAATCCGTATGGAACAATAAATGATACTGCAATCCTGTGGGGAGTCAAGTTCTACAACGATTTGCTCATGCAAGCAGGTCCTCTTGGGAATGTGCAGACAGAGCTACTATTCCGGAAGGATCAATCGACTTTCACATTTGACAAAGGCTGGGCTTTTCCTCGGAGGATCTATTTTAATGGCGACAATTGTGTTATGCCACCTCCGGAAGCCTATCCCTACTTACCAAACACAGGTTCTAAGCAAGATGTCTCGATGTTTACTATGCTATTGCTGATTTCCTTGACTCTCTTGTCCTTCCACCATTCGTTTGCATAA 1368 43.49 MIMALPISRLLSLFPLLPIFLAFSTFLVSTEAYDPLDPNGNITIKWDIMSWTADGYVGVVTLYNFQQYRHIQTPGWSLQWKWAKKEVIWNMLGGQATEQGDCSRFKGNIPHCCKRDPTVVDLLPGTPYNQQIANCCKGGVLNSWVQDPATAVGSFQLTVGSAGTSNKTVRLPKNFTLKAPGPGYTCGPAKIVKPSKFVSPDKRRVTQALMTWNVTCTYSQFLAQKTPTCCVSLSSFYNDTIVSCPKCSCGCQGNLNAPQSCVEPNSPYLASVVSSASSSKSNLTPLVQCTGHMCPIRVHWHVKLNYKEYWRVKITITNFNYMMNYTNWNLVVQHPNFDNLTQIFSFNYQSINPYGTINDTAILWGVKFYNDLLMQAGPLGNVQTELLFRKDQSTFTFDKGWAFPRRIYFNGDNCVMPPPEAYPYLPNTGSKQDVSMFTMLLLISLTLLSFHHSFA 455
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 30773865 30776761 + CaPI482276_07g016160.1 Cam07g1616 131909
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam07g1616 455 PIRSF COBRA 6 455 IPR006918 GO:0010215(InterPro)|GO:0016020(InterPro)
Cam07g1616 455 PANTHER PROTEIN COBRA 22 444 IPR006918 GO:0010215(InterPro)|GO:0016020(InterPro)|GO:0046658(PANTHER)|GO:0052324(PANTHER)
Cam07g1616 455 Pfam COBRA-like protein 56 219 IPR006918 GO:0010215(InterPro)|GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam06g1688 Cam-Chr6:28261538 Cam07g1616 Cam-Chr7:30773865 3.60E-219 dispersed
Cam07g1616 Cam-Chr7:30773865 Cam10g0521 Cam-Chr10:7721039 4.90E-27 dispersed
Cam07g1616 Cam-Chr7:30773865 Cam07g1617 Cam-Chr7:30777300 2.20E-184 tandem
Cam02g0456 Cam-Chr2:5256804 Cam07g1616 Cam-Chr7:30773865 6.60E-117 transposed
Cam04g1196 Cam-Chr4:26038357 Cam07g1616 Cam-Chr7:30773865 3.80E-148 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam07g1616 - - - 0.0