Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam07g1617 ATGAGGTTCTTCATCTCAGCTGTCTTCCTTTTTGTCTTATTTTCTCATGGAGCTGCATATGATCCGTTGGATCCGAATGGGAACATTACGATCAAATGGGACATCATGTCTTGGACGCCTGATGGCTATGTGGCGGTAGTTACGTTGAACAACTTCCAAATGTACCGGCATATAATGAGCCCTGGGTGGACGATGGGGTGGACTTGGGCAAAAAAGGAAGTGATATGGTCGATGGTGGGGTCGCAGACGACGGAGCAAGGCGACTGCTCCAAGTTCAAAGGAAACATTCCTCACTGCTGCAAGAAAGACCCCACCGTTGTGGATTTGATGCCTGGAGTTCCTTACAACCAACAATTTACAAACTGCTGCAAAGGTGGGGTTGTGCCTGCTTGGGGACAAGACCCTCAAGCTGCTGTTTCAGCCTTTCAGCTTAGTGTTGGCCAAGCAGGTACTTCAAACAAGACTGTCAAGCTCCCCAAGAACTTCACTTTGCTTGGTCCCGGCCCCGGATACACTTGTGGACCTGCAAAGGTTGTGCCTTCCACCACTTTCCTCACACCTGACCGCCGCCGCAAAACTCAAGCTCTGATGACTTGGAATGTGACCTGCACTTACTCTCAGTTTCTAGCAAGAAAGAATCCTAATTGTTGTGTTTCTTTCTCGTCTTTCTACAACGATACGATCACATCTTGTCCGTCTTGCGCCTGTGGTTGCCAAAACAAGAACAACTGTGTCCAGAGTGATTCTAAGATTCTTAAGCTGGTTGGAATCAATACACCAAGGAAAGACAATGCCCCGTTGCTGCATTGCACACATCACATGTGCCCCGTTCGAGTTCACTGGCACGTAAAGCAAAATTACAAAGAATATTGGCGGGTGAAGATCGCCATCACAAACTTCAACTACCGAATGAACTATTCGCTTTGGTCTCTCGTTGTCCAGCACCCAAATCTGAACAATGTAACCCAAGTTTTCAGCTTCGACTACAAACCACTTGTTCCCTATGGATCAATCAATGACACAGGAATGTTTTACGGGATGAAGTTCTATAACGACCTTCTCATGGAAGCGGGGCCATTTGGGAATGTACAATCAGAGGTGTTGCTGCAAAAGGACCAGAACACCTTCACTTTCAAGCAAGGATGGGCATTCCCTCGAAAAGTTTACTTCAATGGTGACGAGTGCATGCTTCCACCACCCGACACATACCCATTCCTGCCAAACACTGCCCGGGAAAGGCCAGTTGCCGTCTCATCTTCAATTGCTTTGCTGCTGCTCTTCATGCTGCTAGCTATTTGCTGA 1302 47.62 MRFFISAVFLFVLFSHGAAYDPLDPNGNITIKWDIMSWTPDGYVAVVTLNNFQMYRHIMSPGWTMGWTWAKKEVIWSMVGSQTTEQGDCSKFKGNIPHCCKKDPTVVDLMPGVPYNQQFTNCCKGGVVPAWGQDPQAAVSAFQLSVGQAGTSNKTVKLPKNFTLLGPGPGYTCGPAKVVPSTTFLTPDRRRKTQALMTWNVTCTYSQFLARKNPNCCVSFSSFYNDTITSCPSCACGCQNKNNCVQSDSKILKLVGINTPRKDNAPLLHCTHHMCPVRVHWHVKQNYKEYWRVKIAITNFNYRMNYSLWSLVVQHPNLNNVTQVFSFDYKPLVPYGSINDTGMFYGMKFYNDLLMEAGPFGNVQSEVLLQKDQNTFTFKQGWAFPRKVYFNGDECMLPPPDTYPFLPNTARERPVAVSSSIALLLLFMLLAIC 433
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 30777300 30779046 - CaPI482276_07g016170.1 Cam07g1617 131910
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam07g1617 433 PIRSF COBRA 1 433 IPR006918 GO:0010215(InterPro)|GO:0016020(InterPro)
Cam07g1617 433 PANTHER PROTEIN COBRA 6 426 IPR006918 GO:0010215(InterPro)|GO:0016020(InterPro)|GO:0046658(PANTHER)|GO:0052324(PANTHER)
Cam07g1617 433 Pfam COBRA-like protein 43 206 IPR006918 GO:0010215(InterPro)|GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam04g1196 Cam-Chr4:26038357 Cam07g1617 Cam-Chr7:30777300 2.20E-164 dispersed
Cam06g1687 Cam-Chr6:28258485 Cam07g1617 Cam-Chr7:30777300 1.20E-222 dispersed
Cam07g1616 Cam-Chr7:30773865 Cam07g1617 Cam-Chr7:30777300 2.20E-184 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam07g1617 - - - 0.0