Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam07g1671 ATGCCTGCAGACAAACATGATGAGAGACATAATATGATTAAAAATTCTAAAGAAGAGAATTCACCACCTCCAAAACTAGCAGCAGCAGGAGGTTCATCAAGCTCATCGTTGGCGGCGGCCACGCCATGGCTTAGGTTGAAGGATCCGAGGATCGTGCGCGTGTCGCGAGCTTTCGGAGGCAAGGATCGACACAGCAAAGTTTGTACCATAAGAGGGCTGCGCGACAGGCGTGTAAGGCTTTCGGTTTCAACCGCAATTCAGCTCTATGATCTTCAAGACCGGCTTGGGCTTAATCAGCCGAGCAAGGTCGTCGACTGGTTGCTGAACGCCGCCAAGGATGAAATCGACGAACTCCCTCCATTGCCAATCCCATCGGCAAGCCTTGGCCTTCACTATCAATCTATGCTACCACCAACTGTGCACCACCCGCATAGATCAGAGTTCAAAATCAACTGCATCGACAAGGCCGAGGTCGAGGACGAGACCGAATTGGAAAAGCAACAGAAATCAAATAATAATTCTAATAATCCCTCTCATCCTTCTTCCTTCTCAGCCCTTTTGAACAATGTGTCTGCCCCTCCATTTGGGTTTTATTGGGATCATAATCCTCCATCATCATCGACATCATCATCAACAACAACAACAAATAATCTTCCATTTCTTACATCTCAACAACCTCAGGATAATAATAATCTTCATAACTTCAATCATCTCAATTTGTCTTTGCCTTCCCCTTTGTCTCTTGAGTTCAATCACTTGCACCAAAATTTCTTCATCAACAATAATTCTCTCAATAATACACCTCCTAATTTCCACCCCGCTGTTAGGCCTTTTCATTTTAGTATGGCTACCAAATTCCTTTCTCAAGACAAGAATAACAATAATAATGCAGATAATCCTCCAAATAAGGATCATGGCTTTGCTTCTGATGAATGA 936 43.91 MPADKHDERHNMIKNSKEENSPPPKLAAAGGSSSSSLAAATPWLRLKDPRIVRVSRAFGGKDRHSKVCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNAAKDEIDELPPLPIPSASLGLHYQSMLPPTVHHPHRSEFKINCIDKAEVEDETELEKQQKSNNNSNNPSHPSSFSALLNNVSAPPFGFYWDHNPPSSSTSSSTTTTNNLPFLTSQQPQDNNNLHNFNHLNLSLPSPLSLEFNHLHQNFFINNNSLNNTPPNFHPAVRPFHFSMATKFLSQDKNNNNNADNPPNKDHGFASDE 311
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 31336458 31337968 - CaPI482276_07g016710.1 Cam07g1671 131964
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam07g1671 311 Pfam TCP family transcription factor 60 175 IPR017887 -
Cam07g1671 311 ProSiteProfiles TCP domain profile. 60 118 IPR017887 -
Cam07g1671 311 MobiDBLite consensus disorder prediction 203 230 - -
Cam07g1671 311 MobiDBLite consensus disorder prediction 1 16 - -
Cam07g1671 311 MobiDBLite consensus disorder prediction 168 185 - -
Cam07g1671 311 MobiDBLite consensus disorder prediction 1 34 - -
Cam07g1671 311 MobiDBLite consensus disorder prediction 289 311 - -
Cam07g1671 311 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 24 277 IPR005333 GO:0003700(InterPro)|GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0043565(PANTHER)|GO:2000032(PANTHER)
Cam07g1671 311 MobiDBLite consensus disorder prediction 159 185 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam01g2530 Cam-Chr1:36934615 Cam07g1671 Cam-Chr7:31336458 1.30E-24 dispersed
Cam03g0776 Cam-Chr3:8752585 Cam07g1671 Cam-Chr7:31336458 4.10E-24 dispersed
Cam04g1204 Cam-Chr4:26116332 Cam07g1671 Cam-Chr7:31336458 5.70E-31 dispersed
Cam06g1693 Cam-Chr6:28325893 Cam07g1671 Cam-Chr7:31336458 1.30E-33 dispersed
Cam07g1671 Cam-Chr7:31336458 Cam11g1791 Cam-Chr11:30445571 1.50E-19 dispersed
Cam11g0565 Cam-Chr11:7118653 Cam07g1671 Cam-Chr7:31336458 1.80E-11 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
52351 PF03634 TCP 8.40E-28 No_clan Cam TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam07g1671 - - - 0.0