Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam07g1691 ATGTACCAATCAACTTCTTCCTCTTCTTCCACTCAGAAATCCATGGCCTCCGCCCACGGCGGCGCCGGTCTCACTCGGTACGGTTCCGCGCCTGGATCTCTCCTGACCACGGCGGTCGATTCCGTGATTGGAAGTCGGCAACCGGACTCCGCCGCCACGCTCCGCGGGCCGCCGTCGTTCGGCGGCCACTACTTCTCCTCGGCCGATTCCTCCGTCGTGGAGTCGTCAAGGAAGGTAGTTCAGTCGTCGTCTACTTCCAACGATCTGAAATCATCGTCGTCCACCGCCGCCGCCTTGCATAGGTCATACGGAATCAACGATTTGGTGTTAGGGGATTTCTCGACGGGTAGAAATTTCAATAGCAATGGTGGTCAATCCTCTTCCTCTTCGCCGTTGGTTCGCCAGAGAAGCTCGCCGGCTGGATTTCTCGGCCATCTCTCCGTTGCCGAACCAAACGGAGGGTTTTCATTGACAATGGGAGGTGGTGGAAATGGAGTAGGAAGACTAAAGTCTCAAATGAGCTTCAGTGGGCAGGATAATTCACTTTCCCAAATCTCTGAAATGAGTGAAAGTTTTGTGGAGGCAGCCAATTCCTCAAGCAATGGCCTTCAAAGCAACACCAATTCCACACATTCTTTTGGCCCCTCTGCCTTTGCTATGGACTCTTCATGGGACACCTCCAATAATTCCATTGTCTTTGGTGCCCCTCATGCTAAAAGATCCAAGCACCATTCCGATGCCGACTTCTTCACTGGCCTCGAGTCTCAATTTAGCCTGCCACAAACAACTCTAGAAATGGCAGCTGTGGAGAGGTTGCTTCAAATTCCTGAAGATGCTGTTCCTTGTAAGATTCGAGCCAAGCGTGGCTGTGCTACTCACCCTCGGAGTATTGCCGAACGGGAGAGAAGAACTAGAATCAGTGGAAAATTGAAGAAACTTCAAGAGCTTGTTCCCAACATGGATAAGCAAACAAGCTATTCAGACATGTTGGACTTGGCAGTGCAGCATATCAAAGGTCTTCAAAATCAAATTCAGAAGCTTAACAAAGAAGTTGAGAATTGCACCTGTGGAAGCAAAGAATGCTTATAA 1089 50.23 MYQSTSSSSSTQKSMASAHGGAGLTRYGSAPGSLLTTAVDSVIGSRQPDSAATLRGPPSFGGHYFSSADSSVVESSRKVVQSSSTSNDLKSSSSTAAALHRSYGINDLVLGDFSTGRNFNSNGGQSSSSSPLVRQRSSPAGFLGHLSVAEPNGGFSLTMGGGGNGVGRLKSQMSFSGQDNSLSQISEMSESFVEAANSSSNGLQSNTNSTHSFGPSAFAMDSSWDTSNNSIVFGAPHAKRSKHHSDADFFTGLESQFSLPQTTLEMAAVERLLQIPEDAVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQELVPNMDKQTSYSDMLDLAVQHIKGLQNQIQKLNKEVENCTCGSKECL 362
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 31606061 31613215 - CaPI482276_07g016910.1 Cam07g1691 131984
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam07g1691 362 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 290 340 IPR011598 GO:0046983(InterPro)
Cam07g1691 362 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 87 349 IPR045843 GO:0000978(PANTHER)|GO:0000981(PANTHER)|GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0006355(InterPro)|GO:0006357(PANTHER)
Cam07g1691 362 Gene3D - 291 359 IPR036638 GO:0046983(InterPro)
Cam07g1691 362 Pfam Helix-loop-helix DNA-binding domain 296 341 IPR011598 GO:0046983(InterPro)
Cam07g1691 362 CDD bHLH_AtbHLH_like 295 347 IPR045239 -
Cam07g1691 362 SMART finulus 296 346 IPR011598 GO:0046983(InterPro)
Cam07g1691 362 MobiDBLite consensus disorder prediction 1 18 - -
Cam07g1691 362 Coils Coil 330 357 - -
Cam07g1691 362 MobiDBLite consensus disorder prediction 1 30 - -
Cam07g1691 362 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 293 354 IPR036638 GO:0046983(InterPro)
Cam07g1691 362 FunFam Transcription factor bHLH130 family 291 359 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam07g1691 Cam-Chr7:31606061 Cam10g1695 Cam-Chr10:30970166 1.30E-35 dispersed
Cam07g1691 Cam-Chr7:31606061 Cam02g1763 Cam-Chr2:30763674 2.80E-09 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
52353 PF00010 HLH 9.70E-09 No_clan Cam TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam07g1691 - - - 0.0