Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam07g1717 ATGATGCCCAAATGTAAAACCATCACAACAACGACAACCCATGCAAAATTAGACAAATACCAAGAACATGATGAATATGGGTCCTTCGCCGGATCCTCACGGCGGCGCGTGCTCGACCCACGCGCAGCGTGGGTCCAGCGGTGGAATCGCGTGGTTCTGCTGGCACGTGCAGCCTCGGTGGCGGTTGACCCGCTCTTCTTTTACGTCATTTTCCTCACCAAGGCTGGCTCGCCCTGCTTCTACCGGGATACGGCTGTTGCTGCCGTCGTCACCGCCGTACGCACGTGCGTGGACATGGTGCACGTCTGGCACGTGTGGATGCAGTTCCGTCTGGCGTTCATTTCGACGGCGTCTTTGGTGGTCGGAAGTGGAAGCCTCGTGTGGGACGCACGTGCCATTACTTCTCACTATTTGAGGTCCTTCAGAGGCTTTTGGCTCGATTTGTTTGTCATTATTCCCATCCCTCAGTTCCTTCCAAAGCTTTACCACAGCATTTACTTGATGAAGAAGCTCCAAAAAGTCACTGGCTTTATCTTTGGCAGCATTTGGTGGCGCTTTAACCTCAATGTATTTGCCTATTTGATTGCCTCTCATGTTGTAGGTGGATGCTGGTATCTCCTTGCGACGCAACGACTAATCTCGTGCCTGGAACAAAAATGCGAGAAACTAAAAACGTGCAAATTGGCATTGTCTTGCTCCATATCTGGCTACAAGGGGGCTGGTAATTTTGGAGCTTTTTCCCATGGTAATAACTTGACAAAGATCAAGTCCTTATGCTTGGAGGTCGATGGACCCTTTAGCTATGGAATTTATGAGCCTGTTCTTTTGGTATTCTCTAGCAACTCTCTAGCTGTTAGAATTCTTTATCCTATCTTCTGGGGTTTATTGAACCTAAGTTCCTTTGGCAATGAACTTGATCCCACATGTGATTTGGTGGAAGTGATATTCAGTAGCTGCATCACACTTGGGGGATTGGTGCTGTTTGTTACCCTAATTGGAAATATACAGATTTTCTTGCAAACTGTCATGGCAAGTAAGGAGGATATGCAAATACGGTTTCGAGATATGGAGTGGTGGATGAAGAGGCGACAATTGCCCATTCATTTGAGAGAAAGAGTTCGCAATTTTGAATATCAAAGGTGGGTAGCCATGGGAGGGCTAGATGAGACCGAACTAATCGGAGGCTTGCCCGATGGCCTTCGTCGAGACATCAAACGTTACCTTTGTTTAGACCTTGTTAAGAAGGTACCCTTCTTCCACATGCTCGATGATCTCATACTCGATAACATTTGTGATCGTGTTAAACCGCTCCTATTTGCTAAAGGTGAAAAGATAGTAAGGGAGGGAGACCCTGTGCAAAGAATGGTGTTTATTATTGAAGGATGCGTGGAGCGTAGGCGAGGATGCCTAAGCAAAGGCTTTGTAGGCACCAGTTGGCTCAATTCCGGTGGCTTTTTTGGGGAGGAGCTACTGTCGTGGTGTCTCCGATTTCAACACCCTCCATATTTCGATAAGCTTCCAACCTCATCGGCAACATTTACATGTTTACAGCCAGTCGAAGCATATGGCCTCGACGCATCCGATCTCAAATACATTACCAAACACTTCCGTTACATGTTTGCTACCGAAAAGCTGAAGCAAACTATGCGTTATTACTCTTCATATTGGCGAACATGGGGAGCTGTGATTATTCAGTTTTCATGGCGTCGTCATCGGACACAAAACCGACCCATGACTCACAACCGACTAAGGCAGTATCATATACAATTTTCTTATCTTTGA 1782 46.8 MMPKCKTITTTTTHAKLDKYQEHDEYGSFAGSSRRRVLDPRAAWVQRWNRVVLLARAASVAVDPLFFYVIFLTKAGSPCFYRDTAVAAVVTAVRTCVDMVHVWHVWMQFRLAFISTASLVVGSGSLVWDARAITSHYLRSFRGFWLDLFVIIPIPQFLPKLYHSIYLMKKLQKVTGFIFGSIWWRFNLNVFAYLIASHVVGGCWYLLATQRLISCLEQKCEKLKTCKLALSCSISGYKGAGNFGAFSHGNNLTKIKSLCLEVDGPFSYGIYEPVLLVFSSNSLAVRILYPIFWGLLNLSSFGNELDPTCDLVEVIFSSCITLGGLVLFVTLIGNIQIFLQTVMASKEDMQIRFRDMEWWMKRRQLPIHLRERVRNFEYQRWVAMGGLDETELIGGLPDGLRRDIKRYLCLDLVKKVPFFHMLDDLILDNICDRVKPLLFAKGEKIVREGDPVQRMVFIIEGCVERRRGCLSKGFVGTSWLNSGGFFGEELLSWCLRFQHPPYFDKLPTSSATFTCLQPVEAYGLDASDLKYITKHFRYMFATEKLKQTMRYYSSYWRTWGAVIIQFSWRRHRTQNRPMTHNRLRQYHIQFSYL 593
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 31911849 31915691 - CaPI482276_07g017170.1 Cam07g1717 132010
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam07g1717 593 ProSiteProfiles cAMP/cGMP binding motif profile. 418 491 IPR000595 -
Cam07g1717 593 CDD CAP_ED 418 532 IPR000595 -
Cam07g1717 593 Gene3D Jelly Rolls 416 538 IPR014710 -
Cam07g1717 593 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 156 578 - -
Cam07g1717 593 SUPERFAMILY Voltage-gated potassium channels 43 340 - -
Cam07g1717 593 Gene3D Helix hairpin bin 344 409 - -
Cam07g1717 593 SUPERFAMILY cAMP-binding domain-like 346 537 IPR018490 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam07g1717 Cam-Chr7:31911849 Cam11g0485 Cam-Chr11:6373777 7.70E-198 dispersed
Cam07g1717 Cam-Chr7:31911849 Cam10g1241 Cam-Chr10:25824489 2.00E-92 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam07g1717 K05391 - gmx:100798823 715.687