Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cam07g1743 | ATGCGCAACACTATTCTAATTTCTTTGGAAATAGACAAAAAGACATTGCCAAACGCCAAAACCTCCATAAACTACCCTCGGGCCTCTAGTGAAGGTTCTAACAAGTTTAAGAATCTTGAGGATAATTTTCTTCCTCTGTCTTCTGCCCCAAATCTCCAGGAGTTCAGAGGCTTCCCTTATTTAGTTCTAACTTTGTCCTGTTCTGGTAACTGGATCAACTTCGGCTTGTGGCAAGTGCAAGTCGAGGATGTGTTGACACAATATGGGTTACACAAGTGCAAGTTAAGCGATGGTGGTGCCACGAAGATGGGAAAACTCTATCTTACAACTCTAGTTCTGGCTTGCTTTCATTACTTTGCTCTGTCTGATTTTCAAGGTGAAGCACTCATTGCATTCAAGAACGCATTGAATGCAACAAATAGTCAGCTCAAAGATTGGAACCCAAATCATGTCAATCCATGCAGTAGTTGGTCCAATATTATGTGTAATGGGAACAATGTGACAGCTATAACCTTGCCAACAATGGGATTTACTGGAACCTTGTCTCCAACAATTGTTGCGATAAAATCTCTTTCAACCCTGAACTTGAAGGGAAATTACATAACTGGAGGGATACCAGAGGAATTTGGAAACCTGACAAATTTGGTCACTTTGGATCTAGAAAATAACAGCCTAATTGGTCAAATACCATCGTCCCTGGGTAATCTTAAGAAACTACGGTTCCTAACTCTGAGTCAAAATCATCTAACTGGGACTATTCCTGAGACATTTTCAACCCTTCCTAGCTTGATCAATCTTTCGCTTGATTCAAATAATCTCAGTGGCCAAATTCCGGAGCAGTTATTTCAAGTTTCAAAATTCAACTTTTCTGGAAATAAATTGGATTGTGGCAAAAATTCACGTCGATCCTGTGATTCGGACAGTACAAACTCAGGTGCTTCAAATAAGTCGAAGGTCGGCCTCATAGCTGGACTTATTGCTGGGTTAATAGTTGCTCTTCTTTTGGTCGGATTATTATTTTTATTGTGTAAGCGTAGATATAAAGGCTACAAGGGTGAAGTCTTCGAAGATGTTCCCGGTGAAATTGATCGAAGAATTGCATTTGGTCAGCTGAAAAGATTTGCATGGAGGGAACTACAGCTAGCTACAGAAAATTTTAGTGAGGAAAATGTTATAGGACAAGGAGGCTTTGGAAGGGTTTACAAAGGGGTGCTTGCTGATGGCACCAAGGTTGCAGTGAAACAGTCAACTAATTATGAAAGCCTTGGGGGAGATGCTGCTTTTCTGCGTGAAGTTGAGATGATTAGTGTAGCTGTTCATAGAAATCTATTGCGGCTGATTGGGTTCTGTACAACTCAGACTGAACGCTTATTGGTATATCCCTATATGCAGAACTTGAGTGTTGCCTACCATCTTCGAGAACTTAAGCCTGGGGAACCTATTTTAGATTGGCCTGCTCGAAAACGTGTGGCATTGGGCACAGCTCGTGGTTTAGGATATCTTCATGAACATTGCAATCCAAAGATTATTCACCGAGATGTTAAGGCTGCTAATGTATTGCTTGATGAGGATTTTGAAGCAGTTGTTGGTGATTTTGGCCTGGCCAAGTTGGTTGATGTTAGGAGGACTAGTGTCACAACTCAAGTTCGGGGGACGGCTGGCCACATAGCACCAGAGTACTTATCCACTGGGAAATCATCAGAAAAGACTGATGTTTTTGGTTATGGCATTATGCTTTTAGAACTTATTACAGGGCAACGTGCGATCGACTTCTCACGCTTTGAAGGAGATGATGATGTTTTACTGCTAGACCATGTCAAGAAATTGGAAAGGGAGAAGCGACTCAATATTATTGTGGATGGAAACCTGAATAACTATGATATCAGAGAGGTGGAGACAATGGCCCAAGTTGCGCTCCTATGCACACAGCCATCTTCGGAAAGCCGACCAACAATGTCACAGGTCGTTCGGATGTTAGAAGGCGAGGGGCTTGCAGGGAGGTGGGAGGAATGGCAGCAGTTAGAGGTGAGTCGCAGACAAGATTACGAGAGAATGCAAAGAAGATTTGAATTGGGGAATGATTCTATTTATAGACAGGAAGCTATCCAGTTGTCTGGTGGAAGATGA | 2127 | 42.17 | MRNTILISLEIDKKTLPNAKTSINYPRASSEGSNKFKNLEDNFLPLSSAPNLQEFRGFPYLVLTLSCSGNWINFGLWQVQVEDVLTQYGLHKCKLSDGGATKMGKLYLTTLVLACFHYFALSDFQGEALIAFKNALNATNSQLKDWNPNHVNPCSSWSNIMCNGNNVTAITLPTMGFTGTLSPTIVAIKSLSTLNLKGNYITGGIPEEFGNLTNLVTLDLENNSLIGQIPSSLGNLKKLRFLTLSQNHLTGTIPETFSTLPSLINLSLDSNNLSGQIPEQLFQVSKFNFSGNKLDCGKNSRRSCDSDSTNSGASNKSKVGLIAGLIAGLIVALLLVGLLFLLCKRRYKGYKGEVFEDVPGEIDRRIAFGQLKRFAWRELQLATENFSEENVIGQGGFGRVYKGVLADGTKVAVKQSTNYESLGGDAAFLREVEMISVAVHRNLLRLIGFCTTQTERLLVYPYMQNLSVAYHLRELKPGEPILDWPARKRVALGTARGLGYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRRTSVTTQVRGTAGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAIDFSRFEGDDDVLLLDHVKKLEREKRLNIIVDGNLNNYDIREVETMAQVALLCTQPSSESRPTMSQVVRMLEGEGLAGRWEEWQQLEVSRRQDYERMQRRFELGNDSIYRQEAIQLSGGR | 708 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 32138635 | 32150559 | + | CaPI482276_07g017430.1 | Cam07g1743 | 132036 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cam07g1743 | 708 | SMART | LRR_typ_2 | 212 | 235 | IPR003591 | - | |
Cam07g1743 | 708 | SMART | LRR_typ_2 | 260 | 284 | IPR003591 | - | |
Cam07g1743 | 708 | SMART | LRR_typ_2 | 236 | 259 | IPR003591 | - | |
Cam07g1743 | 708 | Pfam | Leucine rich repeat | 190 | 249 | IPR001611 | GO:0005515(InterPro) | |
Cam07g1743 | 708 | Gene3D | Phosphorylase Kinase; domain 1 | 355 | 462 | - | - | |
Cam07g1743 | 708 | FunFam | Somatic embryogenesis receptor kinase 1 | 355 | 462 | - | - | |
Cam07g1743 | 708 | FunFam | Putative LRR receptor-like serine/threonine-protein kinase | 122 | 306 | - | - | |
Cam07g1743 | 708 | SUPERFAMILY | Protein kinase-like (PK-like) | 365 | 660 | IPR011009 | - | |
Cam07g1743 | 708 | SMART | serkin_6 | 386 | 659 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cam07g1743 | 708 | ProSitePatterns | Protein kinases ATP-binding region signature. | 392 | 414 | IPR017441 | GO:0005524(InterPro) | |
Cam07g1743 | 708 | Pfam | Protein tyrosine and serine/threonine kinase | 389 | 659 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cam07g1743 | 708 | PANTHER | SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 | 112 | 707 | - | - | |
Cam07g1743 | 708 | ProSiteProfiles | Protein kinase domain profile. | 386 | 664 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cam07g1743 | 708 | Pfam | Leucine Rich Repeat | 262 | 281 | IPR001611 | GO:0005515(InterPro) | |
Cam07g1743 | 708 | Pfam | Leucine rich repeat N-terminal domain | 124 | 163 | IPR013210 | - | |
Cam07g1743 | 708 | SUPERFAMILY | L domain-like | 125 | 295 | - | - | |
Cam07g1743 | 708 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 509 | 521 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cam07g1743 | 708 | Gene3D | Ribonuclease Inhibitor | 123 | 306 | IPR032675 | - | |
Cam07g1743 | 708 | Gene3D | Transferase(Phosphotransferase) domain 1 | 463 | 679 | - | - | |
Cam07g1743 | 708 | FunFam | Somatic embryogenesis receptor-like kinase 1 | 463 | 679 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cam02g0010 | Cam-Chr2:1272043 | Cam07g1743 | Cam-Chr7:32138635 | 3.50E-159 | dispersed | |
Cam07g1743 | Cam-Chr7:32138635 | Cam08g0748 | Cam-Chr8:7364670 | 1.40E-124 | dispersed | |
Cam07g1742 | Cam-Chr7:32128257 | Cam07g1743 | Cam-Chr7:32138635 | 3.40E-233 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
85347 | PF00069 | Pkinase | 3.90E-42 | CL0016 | Cam | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cam07g1743 | - | - | - | 0.0 |