Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam07g1743 ATGCGCAACACTATTCTAATTTCTTTGGAAATAGACAAAAAGACATTGCCAAACGCCAAAACCTCCATAAACTACCCTCGGGCCTCTAGTGAAGGTTCTAACAAGTTTAAGAATCTTGAGGATAATTTTCTTCCTCTGTCTTCTGCCCCAAATCTCCAGGAGTTCAGAGGCTTCCCTTATTTAGTTCTAACTTTGTCCTGTTCTGGTAACTGGATCAACTTCGGCTTGTGGCAAGTGCAAGTCGAGGATGTGTTGACACAATATGGGTTACACAAGTGCAAGTTAAGCGATGGTGGTGCCACGAAGATGGGAAAACTCTATCTTACAACTCTAGTTCTGGCTTGCTTTCATTACTTTGCTCTGTCTGATTTTCAAGGTGAAGCACTCATTGCATTCAAGAACGCATTGAATGCAACAAATAGTCAGCTCAAAGATTGGAACCCAAATCATGTCAATCCATGCAGTAGTTGGTCCAATATTATGTGTAATGGGAACAATGTGACAGCTATAACCTTGCCAACAATGGGATTTACTGGAACCTTGTCTCCAACAATTGTTGCGATAAAATCTCTTTCAACCCTGAACTTGAAGGGAAATTACATAACTGGAGGGATACCAGAGGAATTTGGAAACCTGACAAATTTGGTCACTTTGGATCTAGAAAATAACAGCCTAATTGGTCAAATACCATCGTCCCTGGGTAATCTTAAGAAACTACGGTTCCTAACTCTGAGTCAAAATCATCTAACTGGGACTATTCCTGAGACATTTTCAACCCTTCCTAGCTTGATCAATCTTTCGCTTGATTCAAATAATCTCAGTGGCCAAATTCCGGAGCAGTTATTTCAAGTTTCAAAATTCAACTTTTCTGGAAATAAATTGGATTGTGGCAAAAATTCACGTCGATCCTGTGATTCGGACAGTACAAACTCAGGTGCTTCAAATAAGTCGAAGGTCGGCCTCATAGCTGGACTTATTGCTGGGTTAATAGTTGCTCTTCTTTTGGTCGGATTATTATTTTTATTGTGTAAGCGTAGATATAAAGGCTACAAGGGTGAAGTCTTCGAAGATGTTCCCGGTGAAATTGATCGAAGAATTGCATTTGGTCAGCTGAAAAGATTTGCATGGAGGGAACTACAGCTAGCTACAGAAAATTTTAGTGAGGAAAATGTTATAGGACAAGGAGGCTTTGGAAGGGTTTACAAAGGGGTGCTTGCTGATGGCACCAAGGTTGCAGTGAAACAGTCAACTAATTATGAAAGCCTTGGGGGAGATGCTGCTTTTCTGCGTGAAGTTGAGATGATTAGTGTAGCTGTTCATAGAAATCTATTGCGGCTGATTGGGTTCTGTACAACTCAGACTGAACGCTTATTGGTATATCCCTATATGCAGAACTTGAGTGTTGCCTACCATCTTCGAGAACTTAAGCCTGGGGAACCTATTTTAGATTGGCCTGCTCGAAAACGTGTGGCATTGGGCACAGCTCGTGGTTTAGGATATCTTCATGAACATTGCAATCCAAAGATTATTCACCGAGATGTTAAGGCTGCTAATGTATTGCTTGATGAGGATTTTGAAGCAGTTGTTGGTGATTTTGGCCTGGCCAAGTTGGTTGATGTTAGGAGGACTAGTGTCACAACTCAAGTTCGGGGGACGGCTGGCCACATAGCACCAGAGTACTTATCCACTGGGAAATCATCAGAAAAGACTGATGTTTTTGGTTATGGCATTATGCTTTTAGAACTTATTACAGGGCAACGTGCGATCGACTTCTCACGCTTTGAAGGAGATGATGATGTTTTACTGCTAGACCATGTCAAGAAATTGGAAAGGGAGAAGCGACTCAATATTATTGTGGATGGAAACCTGAATAACTATGATATCAGAGAGGTGGAGACAATGGCCCAAGTTGCGCTCCTATGCACACAGCCATCTTCGGAAAGCCGACCAACAATGTCACAGGTCGTTCGGATGTTAGAAGGCGAGGGGCTTGCAGGGAGGTGGGAGGAATGGCAGCAGTTAGAGGTGAGTCGCAGACAAGATTACGAGAGAATGCAAAGAAGATTTGAATTGGGGAATGATTCTATTTATAGACAGGAAGCTATCCAGTTGTCTGGTGGAAGATGA 2127 42.17 MRNTILISLEIDKKTLPNAKTSINYPRASSEGSNKFKNLEDNFLPLSSAPNLQEFRGFPYLVLTLSCSGNWINFGLWQVQVEDVLTQYGLHKCKLSDGGATKMGKLYLTTLVLACFHYFALSDFQGEALIAFKNALNATNSQLKDWNPNHVNPCSSWSNIMCNGNNVTAITLPTMGFTGTLSPTIVAIKSLSTLNLKGNYITGGIPEEFGNLTNLVTLDLENNSLIGQIPSSLGNLKKLRFLTLSQNHLTGTIPETFSTLPSLINLSLDSNNLSGQIPEQLFQVSKFNFSGNKLDCGKNSRRSCDSDSTNSGASNKSKVGLIAGLIAGLIVALLLVGLLFLLCKRRYKGYKGEVFEDVPGEIDRRIAFGQLKRFAWRELQLATENFSEENVIGQGGFGRVYKGVLADGTKVAVKQSTNYESLGGDAAFLREVEMISVAVHRNLLRLIGFCTTQTERLLVYPYMQNLSVAYHLRELKPGEPILDWPARKRVALGTARGLGYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRRTSVTTQVRGTAGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAIDFSRFEGDDDVLLLDHVKKLEREKRLNIIVDGNLNNYDIREVETMAQVALLCTQPSSESRPTMSQVVRMLEGEGLAGRWEEWQQLEVSRRQDYERMQRRFELGNDSIYRQEAIQLSGGR 708
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 32138635 32150559 + CaPI482276_07g017430.1 Cam07g1743 132036
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam07g1743 708 SMART LRR_typ_2 212 235 IPR003591 -
Cam07g1743 708 SMART LRR_typ_2 260 284 IPR003591 -
Cam07g1743 708 SMART LRR_typ_2 236 259 IPR003591 -
Cam07g1743 708 Pfam Leucine rich repeat 190 249 IPR001611 GO:0005515(InterPro)
Cam07g1743 708 Gene3D Phosphorylase Kinase; domain 1 355 462 - -
Cam07g1743 708 FunFam Somatic embryogenesis receptor kinase 1 355 462 - -
Cam07g1743 708 FunFam Putative LRR receptor-like serine/threonine-protein kinase 122 306 - -
Cam07g1743 708 SUPERFAMILY Protein kinase-like (PK-like) 365 660 IPR011009 -
Cam07g1743 708 SMART serkin_6 386 659 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam07g1743 708 ProSitePatterns Protein kinases ATP-binding region signature. 392 414 IPR017441 GO:0005524(InterPro)
Cam07g1743 708 Pfam Protein tyrosine and serine/threonine kinase 389 659 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam07g1743 708 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 112 707 - -
Cam07g1743 708 ProSiteProfiles Protein kinase domain profile. 386 664 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam07g1743 708 Pfam Leucine Rich Repeat 262 281 IPR001611 GO:0005515(InterPro)
Cam07g1743 708 Pfam Leucine rich repeat N-terminal domain 124 163 IPR013210 -
Cam07g1743 708 SUPERFAMILY L domain-like 125 295 - -
Cam07g1743 708 ProSitePatterns Serine/Threonine protein kinases active-site signature. 509 521 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam07g1743 708 Gene3D Ribonuclease Inhibitor 123 306 IPR032675 -
Cam07g1743 708 Gene3D Transferase(Phosphotransferase) domain 1 463 679 - -
Cam07g1743 708 FunFam Somatic embryogenesis receptor-like kinase 1 463 679 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam02g0010 Cam-Chr2:1272043 Cam07g1743 Cam-Chr7:32138635 3.50E-159 dispersed
Cam07g1743 Cam-Chr7:32138635 Cam08g0748 Cam-Chr8:7364670 1.40E-124 dispersed
Cam07g1742 Cam-Chr7:32128257 Cam07g1743 Cam-Chr7:32138635 3.40E-233 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85347 PF00069 Pkinase 3.90E-42 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam07g1743 - - - 0.0