Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam08g0122 ATGGCTCCATCAATTTTTCTTCATGTGTTCTTCTATATGGCTCATTTTTCTTTTGCAGATTCTACAATTTTATATAATGGATTTCGCGAGGCAACAAGATTGATTCTTGATGGCGCGGCGGTTGTTAAGCCGTCTGGTGCCTTACGCCTCACTGACAATTCACAAAATGTAGTAGGCCATGCCTTCTTTCCTGATGCAGTTAAAATGTTTGATAAAAGTTCTCCTTCATATCCCAACGCTTCATCTTTCAGTACAACTTTTGTGTTTGCTATCGAACCTTCAAGCCCTGGCCAAGGTGGGCACGGCTTAGCCTTCACCTTGGCTCCATCAACCAAGTTTGATGGAGCTGAAAGTGGACACTACCTCGGCTTATTCAACCCGGTCAATGATGGAAACCCATCCAACCATATAATCGCTGTCGAATTCGACACTGTTAATGGTCATGGTGAAGGAAGGAATTCCAGAGGAAACCATATTGGGATTAACATCAATGGCATTTCATCAGTTACATCTAGTCCAACTTCTTCTTCCTATTATCTTACTGATGATACAATTTGGAGAGAAATTCAAATTGATTCTGGTGATAAATTCGCTGTTTGGATTGAATATGATGCTCTAAGTAGAATTTTGAACGTCACTATAGGTTTTATGGAGCAAAAGCCAGAAAAGCCACTCATCTCATATCCTATTGATCTAACATCTGTTGTGAAGGAACAAATGTTCGTGGGGTTTGCCGCATCGACCGGGATCGAAACAAGCTCTCATTACATTTTGGGATGGAGCTTTGCAGTCAATGCACCGGCGCGGCAACTGTGGTACTCTCGCCTTCCCGACGGACCAAAAGAACAAAATCTTTCTTCTTCATCCAATAATCCCCAGTTGAAGGTTGTTCTAGCCGTTTCAACTATTGTGGCCATTTTGGGAATTGTTTTCTTAACCTTCTTGTTTATAAGAATGAAGAAGACAGAGAACTTGGAGGACTGGGAAAGAGATTGCCCTCACAGATTCAACTACAAGGATCTTTACACAGCAACTAATGGATTTAATGATAGTGGGCAAATTGGAATTGGGGGATTTGGGTCAGTATATAAAGGCAAGTTACGTTCAACTGGAGCTGAGATTGCTGTGAAGAGAGTCAAACGAAACTCAAGCCAAGGAATGAAGGAATTCGCTGCGGAAATCGAAAGCTTGGGACGATTAAGACACAAGAACTTGGTTAATCTTCAAGGATGGTGCAAGAAAAAGAACGATCTTCTCATAGTTTATGATTATATTCCAAATGGGAGTCTTCATTCTCTTCTCTATACTCCAAAACAGAGCTTGGTATTGAAATGGGAGCAAAGATTCAACATCCTTAAAGGCATTGCTGCAGGATTACTATATCTTCATGAAGATTGGGAGCAAGTAGTGATCCACCGAGACGTAAAGCCAAGTAATGTTCTGATTGACGCTGACATGAATGCCCGGTTGAGCGATTTCGGATTGTCCAGGCAATACGACCACGACGAAATATCACACACGACTCGAGTCGTCGGCACAATAGGCTACATACCGCCAGAGTTGTTTCGCACGGGGAAGGCGTCGAAGAGCGCGGATGTGTTTGCATATGGAGTTCTGCTGCTAGAAGTGGCATGTGGAAGAAAGCCTCTAGGATCAAACCAATTCATATTGGTGGACTGGGTGATGGAATGGTATGAAAGAGGGGACATTCTTTATGTGGTTGATTCAAAATTGGATTCAATTTATAAGGTGGAAGAGATGGAGATGGTGTTGCAACTTGGCCTTCTTTGTACGCATTGGAAACTAGAAGCTCGACCGTCAATGAGACAAGTCATGAGGTTCCTTAATGGAGAAGATCCACTTCCTGCATTCGATGCGTGGGCTAGTTCTCAAAGTATCTTCGAACCTACTTCGAGATTGACAATGAATGATCGCTCATCGGCCCTGTCCATCGGCCTTATCTCCTCTGCCTCCATAAACGTAGGTAGATAG 1992 42.87 MAPSIFLHVFFYMAHFSFADSTILYNGFREATRLILDGAAVVKPSGALRLTDNSQNVVGHAFFPDAVKMFDKSSPSYPNASSFSTTFVFAIEPSSPGQGGHGLAFTLAPSTKFDGAESGHYLGLFNPVNDGNPSNHIIAVEFDTVNGHGEGRNSRGNHIGININGISSVTSSPTSSSYYLTDDTIWREIQIDSGDKFAVWIEYDALSRILNVTIGFMEQKPEKPLISYPIDLTSVVKEQMFVGFAASTGIETSSHYILGWSFAVNAPARQLWYSRLPDGPKEQNLSSSSNNPQLKVVLAVSTIVAILGIVFLTFLFIRMKKTENLEDWERDCPHRFNYKDLYTATNGFNDSGQIGIGGFGSVYKGKLRSTGAEIAVKRVKRNSSQGMKEFAAEIESLGRLRHKNLVNLQGWCKKKNDLLIVYDYIPNGSLHSLLYTPKQSLVLKWEQRFNILKGIAAGLLYLHEDWEQVVIHRDVKPSNVLIDADMNARLSDFGLSRQYDHDEISHTTRVVGTIGYIPPELFRTGKASKSADVFAYGVLLLEVACGRKPLGSNQFILVDWVMEWYERGDILYVVDSKLDSIYKVEEMEMVLQLGLLCTHWKLEARPSMRQVMRFLNGEDPLPAFDAWASSQSIFEPTSRLTMNDRSSALSIGLISSASINVGR 663
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 2144819 2146810 + CaPI482276_08g001220.1 Cam08g0122 132173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam08g0122 663 SUPERFAMILY Protein kinase-like (PK-like) 332 640 IPR011009 -
Cam08g0122 663 Pfam Legume lectin domain 24 271 IPR001220 GO:0030246(InterPro)
Cam08g0122 663 Gene3D Transferase(Phosphotransferase) domain 1 425 620 - -
Cam08g0122 663 PANTHER - 27 623 IPR050528 GO:0002229(PANTHER)|GO:0004675(PANTHER)|GO:0005886(PANTHER)|GO:0042742(PANTHER)
Cam08g0122 663 FunFam serine/threonine-protein kinase PBS1-like 317 424 - -
Cam08g0122 663 ProSitePatterns Serine/Threonine protein kinases active-site signature. 470 482 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam08g0122 663 Gene3D Phosphorylase Kinase; domain 1 333 424 - -
Cam08g0122 663 CDD lectin_legume_LecRK_Arcelin_ConA 25 265 IPR001220 GO:0030246(InterPro)
Cam08g0122 663 CDD STKc_IRAK 354 617 - -
Cam08g0122 663 FunFam L-type lectin-domain containing receptor kinase V.9 20 267 - -
Cam08g0122 663 ProSitePatterns Legume lectins beta-chain signature. 138 144 IPR019825 -
Cam08g0122 663 ProSitePatterns Protein kinases ATP-binding region signature. 354 377 IPR017441 GO:0005524(InterPro)
Cam08g0122 663 Pfam Protein kinase domain 349 612 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam08g0122 663 ProSiteProfiles Protein kinase domain profile. 348 624 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam08g0122 663 FunFam L-type lectin-domain containing receptor kinase S.4 425 627 - -
Cam08g0122 663 SMART serkin_6 348 615 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam08g0122 663 SUPERFAMILY Concanavalin A-like lectins/glucanases 24 280 IPR013320 -
Cam08g0122 663 Gene3D - 16 267 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam08g0122 Cam-Chr8:2144819 Cam10g2197 Cam-Chr10:35392340 2.90E-254 dispersed
Cam08g0122 Cam-Chr8:2144819 Cam10g2198 Cam-Chr10:35397210 2.00E-223 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85350 PF00069 Pkinase 8.50E-51 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam08g0122 - - - 0.0