Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam08g0727 ATGGTACCTTCGGGACCATCTACTCCCATTGGTGGTGCGCAGTCTGTTTCACCGTCGCTTTTGAGATCAAATTCTGGAATGATGGGAGCACAAGGGGGGCTGCCTTCTCAGTCAGCTTTTCCTTCTCTTGTATCCCCACGGACACAGTTTAGCAGTATGAATATGCTTGGTAATACACCCAGTATGTCTTCTCTCCTAAATCAGTCATTTGGTAATGGAGTTCCGAATTCTGGGCCCTCAGGCCTTGGAAACAGCCAACGAGGAGTTATGGACCCTGGTTCTGAGTCAGATCCATTTTCACTTGTTGGCAATGGTGTGAACTTCAACAATACCCCATCGTCATTGGTGACATCAAATACAGCAAACCCTGGTTCATCTAGTCAAGTTTCAGGGCAGCAATTTTCAAATCATTCTAGCAGCCAAATAATACCCAATCAACAGCAACCACAGCAAATTGAACCCCAGAACTTTCAACATGGTCAGCATTCAATGCAACAGTTCGCTACGTCTAATAACATACAGCAGGCACAGCAGCAGCAACAACAACAATTCCAACGAGGAAGCTTGTGCGGTGTTGGACCCGTCAAGTTAGAGCCTCAAATGAATAATAATGATCTTCAAGCACAGCAACTACAGCAGCAGCAGCAGTTGCAGTCAATGAGGAATCTTGGTCCTGTGAAACTGGAACCACAACAACTTCAATCAATGAGAAACATGGGTCCTGTGAAATTGGAACCTCAACAGTCTGATCAGTCATTGTTTCTACAGCAGCAACATCAACATCAACAGCAACAGCAACAGCAACAACAGCAGCTACTCAGTATGTCTAGGCAGTCCTCTCAGGCTGCTGCTGCACACATTAATCTTTTGCAACAACAAAGACTCTTGCAATTGCAACACCAACAGCAACTCCTGAAGGCTATACCTCAGCAAAGGCCACATTTGCCTCAACAATTTCAACAACAAAATTTGCCATTGAGATCCCCTGTAAAATCAGTTTATGAACCTGGCATGTGTGCTCGACGTTTAACAAGTTATATGTGCCAACAACAGCAAAGGCCTGAAGACAACAATATTGAGTTCTGGAGGAAATTTGTTGCAGATTACTTTGCTCCCCATGCCAAAAAGAAATGGTGCGTTTCCATGTATGGAAATGGTCGCCAAACAACTGGTGTATTTCCACAGGATGTTTGGCATTGTGAAATATGCAACCGCAAGCCTGGTCGAGGTTTTGAAGCGACTTTCGAAGTTCTCCCAAGGCTGTTCAAAATCAAGTATGAGAGTGGAACGCTCGAAGAGCTTCTTTATGTTGATATGCCCCGCGAATATCATAATTCATCTGGACAAATTGTCCTTGATTACGCAAAAGCAATACAAGAAAGCGTATTTGAGCAACTTCGTGTTGTTCGCGATGGGCAACTTCGAATAGTTTTTTCTCCAGACTTAAAGATATGTTCTTGGGAATTTTGTGCTCGACGTCATGAAGAGCTTATTCCTCGAAGGTTGCTAATACCTCAGGTTAGTCAGCTGGGTGCAGCTGCTCAGAAGTATCAGACTGCAATTCAAAATGCATCATCTAACTTGCCTACTCCAGAGTTACAAAATAATTGCAACATGTTTGTGGGCTCAGCTAGACAATTGGCCAAGGCGTTGGAAGTGCCATTAGTAAATGACTTGGGATATACGAAGAGATACGTTCGGTGCCTTCAGATATCAGAAGTCGTCAATAGTATGAAGGACTTGATAGATTACAGCCAAGAAACTACGACTGGGCCAATTGAGAGTTTGGCAAAGTTTCCGCGGAAGACGAATGCTTCACCAGGCTTCCACAGCCAAGCTCAAAATATGGAGCAACAATTACCTCAGCCGCAGCAAACAATTGATCAAAACGCAAATGGGGACCAAAGCTCTGCTCAGGCTGCTTCAATGCAGCTTGCTGCTAACAATGGTGTTCCAAGTGCAAATAACTCTGGTAATCCAGCGTCAACCTCATCCCCTGCCAGTACCATTGTTGGGTTACTCCACCAGAACTCCATGAACTCCAGACAGCAGAACTCTATCAACAGCGCTGGCAGCCCTTATGCCGGAAATTCTGCGCAAATATCGTCTCCAGGTTCCTCCACCACGATTGCTCAGGCACAAGCTAACTCCTCGTTCCAATCGCCTACATTGTCCTCACCTAACAATCACCCACAATCATCAATTGGCACTGCAACTACTAATCACATGAGTGCCACTAATTCTCCGGCAAATGTTCCCTTGCAACAGCCAACACAATCCTCAGATGCTGATCAAAACGATTCCCAAAGTTCCGTACAAAAGATTATTCAGGAATACATGATGTCGAATCATCTAAACGGGATGAACACAATGACTGGTGTATCCTCTATAGGAGATGAGGCGAAAACTGTTAACGGGATGTTGCCAGGAAACAACATTATGAGTCTCAATGGACGGAATGGACTCGTCGGGACTGGAACTGCTAATGGCGTTCCTGGGATCAGGAATGCGGGATATGGCTCAATGAGTGGGGGACTTGCTCAGGCTTCTATGGTCAATGGAATGAAGCCGGCAATGGGAAATAACTCGATTTCGAACGGGAGAATCGGGATGGCATCATTGGCTCGAGGACAGAGCATAAATCATCAAGATTTGGGGGACCAGCTTCTTAATGGACTTGGAGCTGTGAATGGATTTAATAATCTTCAATTCGATTATTGA 2721 44.91 MVPSGPSTPIGGAQSVSPSLLRSNSGMMGAQGGLPSQSAFPSLVSPRTQFSSMNMLGNTPSMSSLLNQSFGNGVPNSGPSGLGNSQRGVMDPGSESDPFSLVGNGVNFNNTPSSLVTSNTANPGSSSQVSGQQFSNHSSSQIIPNQQQPQQIEPQNFQHGQHSMQQFATSNNIQQAQQQQQQQFQRGSLCGVGPVKLEPQMNNNDLQAQQLQQQQQLQSMRNLGPVKLEPQQLQSMRNMGPVKLEPQQSDQSLFLQQQHQHQQQQQQQQQQLLSMSRQSSQAAAAHINLLQQQRLLQLQHQQQLLKAIPQQRPHLPQQFQQQNLPLRSPVKSVYEPGMCARRLTSYMCQQQQRPEDNNIEFWRKFVADYFAPHAKKKWCVSMYGNGRQTTGVFPQDVWHCEICNRKPGRGFEATFEVLPRLFKIKYESGTLEELLYVDMPREYHNSSGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSQLGAAAQKYQTAIQNASSNLPTPELQNNCNMFVGSARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSQETTTGPIESLAKFPRKTNASPGFHSQAQNMEQQLPQPQQTIDQNANGDQSSAQAASMQLAANNGVPSANNSGNPASTSSPASTIVGLLHQNSMNSRQQNSINSAGSPYAGNSAQISSPGSSTTIAQAQANSSFQSPTLSSPNNHPQSSIGTATTNHMSATNSPANVPLQQPTQSSDADQNDSQSSVQKIIQEYMMSNHLNGMNTMTGVSSIGDEAKTVNGMLPGNNIMSLNGRNGLVGTGTANGVPGIRNAGYGSMSGGLAQASMVNGMKPAMGNNSISNGRIGMASLARGQSINHQDLGDQLLNGLGAVNGFNNLQFDY 906
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 6290813 6301567 - CaPI482276_08g007270.1 Cam08g0727 132778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam08g0727 906 MobiDBLite consensus disorder prediction 100 182 - -
Cam08g0727 906 PANTHER LIM DOMAIN-BINDING PROTEIN 231 902 IPR029005 GO:0000122(PANTHER)|GO:0005634(PANTHER)|GO:0005667(PANTHER)|GO:0045944(PANTHER)
Cam08g0727 906 Coils Coil 203 223 - -
Cam08g0727 906 MobiDBLite consensus disorder prediction 1 182 - -
Cam08g0727 906 MobiDBLite consensus disorder prediction 648 667 - -
Cam08g0727 906 MobiDBLite consensus disorder prediction 614 643 - -
Cam08g0727 906 MobiDBLite consensus disorder prediction 679 771 - -
Cam08g0727 906 MobiDBLite consensus disorder prediction 243 274 - -
Cam08g0727 906 MobiDBLite consensus disorder prediction 8 91 - -
Cam08g0727 906 Pfam LIM-domain binding protein 342 596 IPR029005 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam05g0941 Cam-Chr5:8523597 Cam08g0727 Cam-Chr8:6290813 1.50E-93 dispersed
Cam08g0727 Cam-Chr8:6290813 Cam08g1085 Cam-Chr8:17211941 7.70E-274 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam08g0727 - - - 0.0