Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cam08g0789 | ATGCTTGGGGACTCCACTACTTCCGTCTTGGGCGGCGGCGCCGGAGGAGGAGAGGCCGCTGTGCCGGAGACGACTCATCATCACGATGGACTGATGGGGGACATGGAGGAGAATAATAACAATTCTGGTGAGGATGAGAGAGGGAGAAGCGGAGGTGGCGGCGGAGACGACGGTGACCGGAGCTTCGGCGGAAACCGGTGGCCGAGACAAGAAACTTTAGCTCTCTTGAAAATACGGTCAGAAATGGACGTGGCTTTTCGAGATGCAAGCGTTAAAGGCCCTTTGTGGGAACAAATTTCCAGGAAATTGGGGGAGCTTGGGTATCATCGAAGTGCAAAAAAATGCAAGGAGAAATTTGAGAATGTTTACAAATATCACAAAAGAACTAAAGAAGTTAGAAGTGGGAAACCAGATAGCAAAACTTATAAGTTCTTTGAACAATTAGAAGCTCTTGAGAATCACCCTCCTCTTAATTTCCACTCCCATTTGTCTAAACCAACTCCTCCGCCGCAGCCGCCACCGCCTACCGCCGTCATTTCCCCCATTCCTTCAAGTACTGTTCCATCCACCACTCTACCTCACTTGATGAACATATCATTCTCTCAACCAAACCCCACAATTCATCTCCCATCTCCTCCGCCCCCTCCTGCTCCGTTGCCATTGAATAACCCTACAAGTTTACCCACCACCGTCCCTCCCTCCATGCCGTTTCAAATCAATGTGCCTTCGGCGGGAGTGGGGTTTCAGAGCATTGAAGCGGATCTCATCTCGAACTCGACGTCTGATGATATCAATTCGTCAACGTCATCAGATGAGGCGTCGAGAAAGAGGAGGAGGAAGAGGAAATGGAAGGACTTTTTTGAGAGATTGATGAAGGAAGTGATTCAAAAGCAAGAGGAAATGCAAAAGAGATTCTTGGAAGCAATTGAGAAGAGGGAGCAAGAGAGAGTTGTGAGAGAAGAAGCTTGGAGGATGCAAGAGATGGCCAAAATCAATAGAGAAAGAGAGATTTTAGCTCAAGAAAGATCAATGGCAGCTGCAAAAGATGCTGCGATTACATCGTTCCTTCAAAAAATAACTGAATCCCAACACAACAATAACAACAACAACGCATCACAACCGTCACCACCGCCCCCGCCACCGCCACCGTCCCAACAACAACAACAACCAATTCCAACGTCAAATCCAACACCAGTCGTGCAACCTTCACCGCGACCGCCACCTCCGGCCGCACCACAAGCTTCCACATTGCAAGTTGTTGTTCCCAATTCCACCCCACAAAAAGTGGGGAACAATAATGAATTGTTGCAAATGGAAATCATGAAAATGGATCATAATGGTGGGGAGAATTATAGCATTAGCCCAGCTTCAAGCTCATCAAGATGGCCAAAAGTGGAAGTTCAAGCACTGATCAAATTGAGAACAAACCTTGAAACCAAATATCAAGAGAATGGGCCAAAAGGGCCTTTATGGGAAGAGATATCATCAGCCATGAAGAAACTTGGGTACAATAGAAATGCAAAGAGGTGCAAAGAGAAGTGGGAAAACATAAACAAATACTTCAAGAAAGTGAAGGAAAGTAGAAAAGCAAGGCCTGAAGATTCCAAGACTTGCCCTTATTTTCACCAGCTTGATGCTTTGTATAGGGAGAAGAGCAACAACACGAACAACAACATAATCGGATCCTCGACGCAAATTATGCAGCATCAACAGCAGCCATTGATGGTTCGTCCCGAGCAACAATGGCCTCCCCAACAAGAGATCACCCGCCCCGACTCAGGAAACGAAGAGATGGAGAGTGAACCAATGGATCGTGATGATAAAGACGACGATGAAGAAGATGAAGAGGAAGAGGACGAAGGTGGAGGGAACTATGAGATTGTGGCAAGCAAACCAGCTTCAGTGAGTGCTGCAGAGTGA | 1920 | 46.98 | MLGDSTTSVLGGGAGGGEAAVPETTHHHDGLMGDMEENNNNSGEDERGRSGGGGGDDGDRSFGGNRWPRQETLALLKIRSEMDVAFRDASVKGPLWEQISRKLGELGYHRSAKKCKEKFENVYKYHKRTKEVRSGKPDSKTYKFFEQLEALENHPPLNFHSHLSKPTPPPQPPPPTAVISPIPSSTVPSTTLPHLMNISFSQPNPTIHLPSPPPPPAPLPLNNPTSLPTTVPPSMPFQINVPSAGVGFQSIEADLISNSTSDDINSSTSSDEASRKRRRKRKWKDFFERLMKEVIQKQEEMQKRFLEAIEKREQERVVREEAWRMQEMAKINREREILAQERSMAAAKDAAITSFLQKITESQHNNNNNNASQPSPPPPPPPPSQQQQQPIPTSNPTPVVQPSPRPPPPAAPQASTLQVVVPNSTPQKVGNNNELLQMEIMKMDHNGGENYSISPASSSSRWPKVEVQALIKLRTNLETKYQENGPKGPLWEEISSAMKKLGYNRNAKRCKEKWENINKYFKKVKESRKARPEDSKTCPYFHQLDALYREKSNNTNNNIIGSSTQIMQHQQQPLMVRPEQQWPPQQEITRPDSGNEEMESEPMDRDDKDDDEEDEEEEDEGGGNYEIVASKPASVSAAE | 639 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 9368873 | 9371462 | + | CaPI482276_08g007890.1 | Cam08g0789 | 132840 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cam08g0789 | 639 | ProSiteProfiles | Myb-like domain profile. | 65 | 123 | IPR001005 | - | |
Cam08g0789 | 639 | MobiDBLite | consensus disorder prediction | 599 | 623 | - | - | |
Cam08g0789 | 639 | MobiDBLite | consensus disorder prediction | 566 | 639 | - | - | |
Cam08g0789 | 639 | MobiDBLite | consensus disorder prediction | 206 | 231 | - | - | |
Cam08g0789 | 639 | Coils | Coil | 284 | 315 | - | - | |
Cam08g0789 | 639 | Gene3D | - | 67 | 128 | - | - | |
Cam08g0789 | 639 | Gene3D | - | 462 | 523 | - | - | |
Cam08g0789 | 639 | MobiDBLite | consensus disorder prediction | 372 | 413 | - | - | |
Cam08g0789 | 639 | ProSiteProfiles | Myb-like domain profile. | 454 | 518 | IPR001005 | - | |
Cam08g0789 | 639 | FunFam | Trihelix transcription factor GT-2 | 67 | 128 | - | - | |
Cam08g0789 | 639 | FunFam | Trihelix transcription factor GT-2 | 462 | 523 | - | - | |
Cam08g0789 | 639 | MobiDBLite | consensus disorder prediction | 156 | 238 | - | - | |
Cam08g0789 | 639 | MobiDBLite | consensus disorder prediction | 162 | 181 | - | - | |
Cam08g0789 | 639 | MobiDBLite | consensus disorder prediction | 363 | 416 | - | - | |
Cam08g0789 | 639 | MobiDBLite | consensus disorder prediction | 566 | 591 | - | - | |
Cam08g0789 | 639 | PANTHER | FI21293P1 | 38 | 609 | - | - | |
Cam08g0789 | 639 | MobiDBLite | consensus disorder prediction | 259 | 280 | - | - | |
Cam08g0789 | 639 | Pfam | Myb/SANT-like DNA-binding domain | 65 | 151 | IPR044822 | - | |
Cam08g0789 | 639 | Pfam | Myb/SANT-like DNA-binding domain | 460 | 547 | IPR044822 | - | |
Cam08g0789 | 639 | PRINTS | Proline rich extensin signature | 203 | 215 | - | - | |
Cam08g0789 | 639 | PRINTS | Proline rich extensin signature | 167 | 183 | - | - | |
Cam08g0789 | 639 | PRINTS | Proline rich extensin signature | 374 | 399 | - | - | |
Cam08g0789 | 639 | PRINTS | Proline rich extensin signature | 215 | 236 | - | - | |
Cam08g0789 | 639 | MobiDBLite | consensus disorder prediction | 22 | 54 | - | - | |
Cam08g0789 | 639 | SMART | sant | 63 | 125 | IPR001005 | - | |
Cam08g0789 | 639 | SMART | sant | 458 | 520 | IPR001005 | - | |
Cam08g0789 | 639 | CDD | GT1 | 65 | 130 | - | - | |
Cam08g0789 | 639 | MobiDBLite | consensus disorder prediction | 1 | 67 | - | - | |
Cam08g0789 | 639 | CDD | GT1 | 461 | 525 | - | - | |
Cam08g0789 | 639 | MobiDBLite | consensus disorder prediction | 182 | 205 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cam01g0118 | Cam-Chr1:1458956 | Cam08g0789 | Cam-Chr8:9368873 | 1.60E-93 | dispersed | |
Cam01g1103 | Cam-Chr1:16613499 | Cam08g0789 | Cam-Chr8:9368873 | 2.40E-34 | dispersed | |
Cam02g0075 | Cam-Chr2:1854573 | Cam08g0789 | Cam-Chr8:9368873 | 6.90E-91 | dispersed | |
Cam06g1006 | Cam-Chr6:15902021 | Cam08g0789 | Cam-Chr8:9368873 | 3.20E-37 | dispersed | |
Cam08g0789 | Cam-Chr8:9368873 | Cam10g1891 | Cam-Chr10:33006809 | 1.20E-34 | dispersed | |
Cam08g0789 | Cam-Chr8:9368873 | Cam08g0790 | Cam-Chr8:9512631 | 1.40E-88 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
52378 | PF13837 | Myb_DNA-bind_4 | 2.90E-21 | CL0123 | Cam | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cam08g0789 | - | - | - | 0.0 |