Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam08g0918 ATGAACCTCACTACTCTTGTTTTCTGGATCATCCAGATCTCCATCCATGCAGTTCCAGTTTTTTCTAAAACCAAAGCGCCAGACGTTTCTGCATTGAATGTGATGTTTAGTAGTTTAAATTCACCTTCACAACTCTCTGGTTGGGGTTCAAGTGGGGGTGATCCATGTGGGGATTCTTGGGAAGGGATCCAATGCTCAGGATCATCTGTCACTGAAATAAGTTTATCAGACTTTGGACTAAGTGGTTCAATGGGTTACCAGCTTTCAAATTTGGCAACTGTCACCTACTTTGATTTGAGCAAGAACAACCTCAATGGTGATATCCCCTATCAACTTCCCCCCAATGCAGTTCACATCGATCTTTCTGGGAACAGCTTCACTGGTAGTGTGCCTTATTCAATTTCTCAAATGGCTGATCTTGAATTTTTAAATCTTGGTCATAATAAGCTTAGCAACCAATTGAGTGACATGTTTGGCAAGCTTTCTAAACTCAAAAGGATGGATCTCTCATACAACTCAATTTCAGGAAACTTACCTCAAAGTTTTAAGAAGCTTTCAAGCCTTACTGTATTGCATATACAAGATAATAAATTTTCAGGTTCAATCAATGTTCTTGCTGACCTTCCACTTGATGATTTGAATGTTGCAAATAACAAATTCACCGGATGGATTCCTGAAAGTCTCGAAGATATAGATAATTTGGAAACTGTAGGAAATTCATGGTCATCTGGGCCAGCACCACCTCCACCACCAGGGACGGTATCTCCGAAAGGCAAGAACTCGAAGAAGGAGGAGTCGAACGGGAAATCGTCGGTGATAAGTGGGTTAGTGATAGCAGGAATAGCCATGGGAGTTTTAGCAATAATAGCAATAGTGATTGGATTTATGTCAAGAAGGCATAAATCCTTCACTCCTTCCCATTTTCTTGATGAAGACACAAGCCAACACAGATCCTTCACTCCACTCACATCCCAGGAACTCCCAAAGGGAAATTTGTACAATAATAATAATGCTAATAATAATACTAATAATGATAGAAAATCCTTCAATTCTGATGCCTCTGTTGACATAAAAGGTCTAAGTGTTGTTAGGCCACCTCCAGCTCCTTCTGATCCTGTTCAATCCTTCAGTGATAATCAATTTGCAAGCCGTTTGAATTCAAGGAGAAGCACTTCCTTTCGTGCCATTTCTTATTCTTTACTTGATTTGCAAACTGCCACTTCCAATTTTGCCCCTGCTCGCCTTCTCGGTGAGGGTACGATCGGACGTGTTTATAAGGCTAAGTATGGAGATGGAAAGGTATTGGCAGTGAAGAAGATAGATTCATCAGTTTTTCAAGGTAGAAGAACAGAGGAGTTTGGTGAAGTAGTTGGAATAATCTCAAAGCTTCATCACACAAACATTACAGAAGTGGTTGGGTTTTGTTCAGAGCAAGGACATCATTTGCTGGTTTATGAATATTTCATGAATGGTTCACTTCATGAGTTTCTTCATATGTCTGATGACTTTAGTAAACCACTCACTTGGAACACTAGAGTCAGAATTGCTTTGGGGACTGCAAGAGCTCTTGAGTATCTCCACGAAGTTTGCTCACCATCCATAATTCACATGAATATCAAGTCCTCTAATATATTGCTTGATGCGGAACTTAATCCTCGTCTCTCAGATTATGGTTTGGCAACATTTTATAAGCATAGAAGCCAAAACCCTGGAGGTGGATATGATGCTCCAGAATGCCTTAAGGGTTCAAGTTATACAATGAAGAGTGATATTTACAGTTTGGGAGTGGTGATGTTGGAGTTGTTGACGGGGCGGATGCCTTATGACTCTGGGAAAGCCAAAGTGGAACAATGTCTAGTAAGATGGGCAACACCACAGCTACATGACATAGATGCATTGGACAAAATGGTGGATCCTGCCTTGCGAGGTTTATATCCTCCAAAATCAGTGTCTAGATTTGCAGATATCATTGCCCTTTGCGTTCAATCAGAGCCTGAATTTAGGCCTCCCATGTCCGAAGTGGTTCAAGCCTTGGTTACTTTGGTTCAACGATCAAGCATGAATATGAGAGATGATCTTGGAAACTCTCGACGAATGGATGATTATGACTATTAA 2115 40.71 MNLTTLVFWIIQISIHAVPVFSKTKAPDVSALNVMFSSLNSPSQLSGWGSSGGDPCGDSWEGIQCSGSSVTEISLSDFGLSGSMGYQLSNLATVTYFDLSKNNLNGDIPYQLPPNAVHIDLSGNSFTGSVPYSISQMADLEFLNLGHNKLSNQLSDMFGKLSKLKRMDLSYNSISGNLPQSFKKLSSLTVLHIQDNKFSGSINVLADLPLDDLNVANNKFTGWIPESLEDIDNLETVGNSWSSGPAPPPPPGTVSPKGKNSKKEESNGKSSVISGLVIAGIAMGVLAIIAIVIGFMSRRHKSFTPSHFLDEDTSQHRSFTPLTSQELPKGNLYNNNNANNNTNNDRKSFNSDASVDIKGLSVVRPPPAPSDPVQSFSDNQFASRLNSRRSTSFRAISYSLLDLQTATSNFAPARLLGEGTIGRVYKAKYGDGKVLAVKKIDSSVFQGRRTEEFGEVVGIISKLHHTNITEVVGFCSEQGHHLLVYEYFMNGSLHEFLHMSDDFSKPLTWNTRVRIALGTARALEYLHEVCSPSIIHMNIKSSNILLDAELNPRLSDYGLATFYKHRSQNPGGGYDAPECLKGSSYTMKSDIYSLGVVMLELLTGRMPYDSGKAKVEQCLVRWATPQLHDIDALDKMVDPALRGLYPPKSVSRFADIIALCVQSEPEFRPPMSEVVQALVTLVQRSSMNMRDDLGNSRRMDDYDY 704
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 14075535 14084420 - CaPI482276_08g009180.1 Cam08g0918 132969
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam08g0918 704 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 488 692 - -
Cam08g0918 704 Gene3D Transferase(Phosphotransferase) domain 1 488 701 - -
Cam08g0918 704 Pfam Leucine rich repeat N-terminal domain 27 66 IPR013210 -
Cam08g0918 704 PANTHER LEUCINE RICH REPEAT KINASE 2 268 680 IPR051420 -
Cam08g0918 704 Gene3D Ribonuclease Inhibitor 25 255 IPR032675 -
Cam08g0918 704 Pfam Leucine rich repeat 156 198 IPR001611 GO:0005515(InterPro)
Cam08g0918 704 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 376 487 - -
Cam08g0918 704 MobiDBLite consensus disorder prediction 235 269 - -
Cam08g0918 704 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 25 252 - -
Cam08g0918 704 SUPERFAMILY Protein kinase-like (PK-like) 390 678 IPR011009 -
Cam08g0918 704 MobiDBLite consensus disorder prediction 307 350 - -
Cam08g0918 704 ProSiteProfiles Protein kinase domain profile. 410 681 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam08g0918 704 SUPERFAMILY L domain-like 27 236 - -
Cam08g0918 704 MobiDBLite consensus disorder prediction 315 350 - -
Cam08g0918 704 Pfam Leucine Rich Repeat 118 137 IPR001611 GO:0005515(InterPro)
Cam08g0918 704 Gene3D Phosphorylase Kinase; domain 1 374 487 - -
Cam08g0918 704 Pfam Protein kinase domain 413 676 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam01g0991 Cam-Chr1:13669430 Cam08g0918 Cam-Chr8:14075535 1.30E-135 dispersed
Cam08g0918 Cam-Chr8:14075535 Cam09g0143 Cam-Chr9:2246534 1.80E-137 dispersed
Cam08g0918 Cam-Chr8:14075535 Cam07g1140 Cam-Chr7:25833262 7.80E-165 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85356 PF00069 Pkinase 2.30E-43 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam08g0918 - - - 0.0