Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam08g0993 ATGAAGTTTCTCATATTGCTCTCCCTTTTATTATCACTTCTCACTAAGCTAAAGATCAACATGGGTGAGAATTCTATTGTGAGTAAGTTGAAGCCTTATATTCTAGTGGTGAGCCTACAATTTGGAATTGCAGGCATATATGTAATATGCATGGCCACTCTCACAAAAGGCATGAGTCGTTATGTTTTGATCGTGTATCGAAACACTATTGCTGCTCTCTTTCTCGCTCCGTTCGCACTAATTTTCGAAAGGAAAACAAGACCAAAGATGACACTCCCTGTCGCTTTACAAATCATGGTCTTAGGTTTTCTAGAACCAGTTGTGGATCAAGGGTTTGGTTATCTAGGAATGATGTACACGTCAGCATCATTTGCATCGGCCATCATGAATGCTGTGCCTTCTGTTACCTTTATCATTGCAGTCATTTTTCGGGTGGAGCATCTAAATATAAAACAAGTACGAGGGGTAGCCAAAGTAATTGGCACTTTAGTGACCTTTGCTGGAGCTTTGGTTATGACACTTTACAAAGGCCCAATTCTTGAGTTCTTTTGGACACAAAAAACCAACCACCATGTTAACAGCGGCGCCGCCGCAGCCAATCAGCACTGGGTGGCCGGAACTTTGTTCATCCTTCTGGGCTGCGTGTCTTGGTCTTGTTTCTACATATTACAATCTATAACAGTGAAGAGATACCCAGCGGAGCTGTCTCTGTCGGCATTGATATGCTTGGCCGGTGCACTTCAAAGCACAGTGATAGCAGTAGCTATAGAGCATCGTCCTAGCGCATGGGCTGTGGGTTGGGACTCTAGGCTTCTAGCTCCTCTCTATACGGGAATAGTTGGATCAGGAATTGCATATTACTTTCAAGCTATAGTTATGAAGACAAGAGGTCCTGTATTTGTGACGGCTTTCAACCCTTTATGTATGATTGTCGTCACTATTATCTCCTCTATTGTTCTCGCCGAGAAGATTCATCTTGGAAGCGTGATTGGAGCCATTATCATCGCACTTGGGCTTTATTCAGTCGTTTGGGGGAAAAGCAAGGATTATTCCACTGCCGGCAACACCCAAAAGCCTAACGCCGCCGTGTCGGAGCTTCCAATTACTGCCTCTCAACCCCCAACCGAACAAGATGTTCATCTTCAACCTCCAAAATGA 1158 44.13 MKFLILLSLLLSLLTKLKINMGENSIVSKLKPYILVVSLQFGIAGIYVICMATLTKGMSRYVLIVYRNTIAALFLAPFALIFERKTRPKMTLPVALQIMVLGFLEPVVDQGFGYLGMMYTSASFASAIMNAVPSVTFIIAVIFRVEHLNIKQVRGVAKVIGTLVTFAGALVMTLYKGPILEFFWTQKTNHHVNSGAAAANQHWVAGTLFILLGCVSWSCFYILQSITVKRYPAELSLSALICLAGALQSTVIAVAIEHRPSAWAVGWDSRLLAPLYTGIVGSGIAYYFQAIVMKTRGPVFVTAFNPLCMIVVTIISSIVLAEKIHLGSVIGAIIIALGLYSVVWGKSKDYSTAGNTQKPNAAVSELPITASQPPTEQDVHLQPPK 385
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 16062190 16069276 + CaPI482276_08g009930.1 Cam08g0993 133044
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam08g0993 385 SUPERFAMILY Multidrug resistance efflux transporter EmrE 66 175 - -
Cam08g0993 385 PANTHER WAT1-RELATED PROTEIN 34 355 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Cam08g0993 385 SUPERFAMILY Multidrug resistance efflux transporter EmrE 263 347 - -
Cam08g0993 385 Pfam EamA-like transporter family 42 161 IPR000620 GO:0016020(InterPro)
Cam08g0993 385 Pfam EamA-like transporter family 206 343 IPR000620 GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam08g0993 Cam-Chr8:16062190 Cam10g1612 Cam-Chr10:29909522 7.40E-93 dispersed
Cam11g1590 Cam-Chr11:28644389 Cam08g0993 Cam-Chr8:16062190 6.10E-108 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam08g0993 - - - 0.0