Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam08g1063 ATGAAGGTAGGCATGGGACGTCCAATAGATAACCTTGTTCTACTCATGATGTTGTTGTTTTCAGCGGCGGCGTCACCGGACTGTGACCAACGACGGTGTGGGAACTTGGAAATTCCATTTCCATTCGGAACGAGAAAAGGGTGTTATCTGAGTGAGAATTTCTTGATCACCTGCAACAAAACTCATAATCCTCCAAGAGCATTTATAGGGGATGGCAACGTTATTGTAACCAATATATCAATCAACGACAGCGAGCTCCGCATCTTGGGTTTGGTAGCCAAAGATTGCTACACACGAAATGGTTCCGAGACTGACAGTCATAACGAGGTCACACTGAATACGCCTTTATTCACCATTTCCAACACCAAGAACAAGTTCGTTGCCATTGGCTGCGATACTCAAGCTTTTATTTCTGGGAAAATCGAGGGGGATGCCTATAAAGGTGGTTGCATGGCGTTGTGTGGAAACAGTAATAAAACTCTAACAGATGGGCACTGCGCTGGGAATGGGTGCTGTGAGTTGGAGATTCCCAAAGGCCTAAAATATTTGGAGATCGTGGTCAAAAGCTTCCACCAGCACACTGAGGTATTCGACTTCAATCCATGTGGGTATGCTTTTGTGATCCAACAAAACAACTTCACTTTCTCCTCCAAATATATTCACATGTTTACACATGTAAGAGTTCCCCTGATGCTTGATTGGGGCATCCCAAACGGTACTTGCTCAAAATCAAATAAAAAAACCAACTGCCATAATATATGTGGACCAAATACCCAAAAGATTAACTACCTCAATGATGGATCTCAATATCGGTGCAAATGTTTGGATGGTTTCACGGGGAATCCATATCTCTCTGAAGGTTGTCAAGATGTAAATGAATGCAAGGATACAAGGTTGAATGATTGTGAACATAAACAGATGTGTGTTAACACACAAGGAAATTTTACCTGCTCTTGTCCTAAGAACTATAAAGGAGATGGAAGAAACAAGGGAAAAGGATGCATTCCAACCTATAAGGCCTTCGATCAATACATCATCGGATGTACTGTAGGGTTAACACTCTTAGTAATTGGGTGCACATTGTTATGCTTGGGTTACGCAAAGTGGAAGGCCATCCACCAAAAGAAATATTTTTTCAAGAAAAATGGAGGTTTGGTGCTTGAACAACATCTTTCTGAGTGGGAATCACCGGTGGAGATGTTCAGAATTTTCACCCATGAAGAGTTGAAGAAGGCTACAAACAAGTTCCATGATAGCGCAGTGGTGGGAAAAGGTGGCTTTGGCACCGTTTACAAAGGCGTCTTAGATGATGGCTTGATAATTGCAATCAAGAAATCGAAATTAGTAGACCAATCCCAAACGGACCAATTCATTAATGAAGTCATTGTTCTGTCTCAAATCAACCATCGCAACGTGGTCAAGCTGCTGGGGTGCTGTTTGGAGACAAAAGTTCCTTTGTTGGTCTACGAGTTTGTAACCAATGGCACCCTCTTTGAACACATCCACAACAAAACAAACCATGCTCCTCTTTCCTGGGAAACTCGATTGAAGATAGCTTCAGAAATTGCTAGCGTCCTTGCATATTTGCATTCTTCCACTTCTACTCCCATCATCCACAGAGATATCAAGTCTTCTAATGTACTTTTAGACCATGATTACACAGCAAAGCTGTCTGATTTTGGAGCTTCAAAACTGGTACCGTTGGATCATACTCAGCTTTCCACGATGGTGCAAGGGACTCTTGGATATTTGGACCCTGAGTACTTGTTGACAAGTGAGTTGACGGAGAAAAGTGACGTGTACAGCTTCGGAATTTTGCTTTTTGAGCTTATCACGGGAAAGAAGGCGGTGCGTTTTGATGTCCCAGAAGAAGAAAGAACTCTAGCCAAGATAGTTCTGTGTGCAATGAATGAAGATCGTTTGGAAGAAATTGTTGAGGAGGGATTGGCAACAGAAGCAAATATTGAGGAGATACAAGAGGTGGCAAAGCTAGCAAAAGAGTGTGTAAGAGTTAAAGGGGAGGAGCGCCCCACCATGAAGGAGGTGGCTATAAAGTTGGAGGAGCTGCGAATGTTACACGCTTGA 2085 42.78 MKVGMGRPIDNLVLLMMLLFSAAASPDCDQRRCGNLEIPFPFGTRKGCYLSENFLITCNKTHNPPRAFIGDGNVIVTNISINDSELRILGLVAKDCYTRNGSETDSHNEVTLNTPLFTISNTKNKFVAIGCDTQAFISGKIEGDAYKGGCMALCGNSNKTLTDGHCAGNGCCELEIPKGLKYLEIVVKSFHQHTEVFDFNPCGYAFVIQQNNFTFSSKYIHMFTHVRVPLMLDWGIPNGTCSKSNKKTNCHNICGPNTQKINYLNDGSQYRCKCLDGFTGNPYLSEGCQDVNECKDTRLNDCEHKQMCVNTQGNFTCSCPKNYKGDGRNKGKGCIPTYKAFDQYIIGCTVGLTLLVIGCTLLCLGYAKWKAIHQKKYFFKKNGGLVLEQHLSEWESPVEMFRIFTHEELKKATNKFHDSAVVGKGGFGTVYKGVLDDGLIIAIKKSKLVDQSQTDQFINEVIVLSQINHRNVVKLLGCCLETKVPLLVYEFVTNGTLFEHIHNKTNHAPLSWETRLKIASEIASVLAYLHSSTSTPIIHRDIKSSNVLLDHDYTAKLSDFGASKLVPLDHTQLSTMVQGTLGYLDPEYLLTSELTEKSDVYSFGILLFELITGKKAVRFDVPEEERTLAKIVLCAMNEDRLEEIVEEGLATEANIEEIQEVAKLAKECVRVKGEERPTMKEVAIKLEELRMLHA 694
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 16995935 16998759 + CaPI482276_08g010630.1 Cam08g1063 133114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam08g1063 694 ProSiteProfiles Protein kinase domain profile. 416 694 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam08g1063 694 Gene3D Phosphorylase Kinase; domain 1 388 491 - -
Cam08g1063 694 ProSiteProfiles EGF-like domain profile. 290 329 IPR000742 -
Cam08g1063 694 SUPERFAMILY Protein kinase-like (PK-like) 392 688 IPR011009 -
Cam08g1063 694 SMART serkin_6 416 692 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam08g1063 694 ProSitePatterns Serine/Threonine protein kinases active-site signature. 537 549 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam08g1063 694 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 308 319 IPR000152 -
Cam08g1063 694 FunFam Wall-associated receptor kinase 2 386 491 - -
Cam08g1063 694 SUPERFAMILY EGF/Laminin 289 329 - -
Cam08g1063 694 Pfam Wall-associated receptor kinase galacturonan-binding 28 88 IPR025287 GO:0030247(InterPro)
Cam08g1063 694 Pfam Protein kinase domain 417 682 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam08g1063 694 ProSitePatterns Protein kinases ATP-binding region signature. 422 445 IPR017441 GO:0005524(InterPro)
Cam08g1063 694 CDD STKc_IRAK 422 689 - -
Cam08g1063 694 ProSitePatterns Calcium-binding EGF-like domain signature. 290 317 IPR018097 GO:0005509(InterPro)
Cam08g1063 694 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 24 690 IPR045274 GO:0004674(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)|GO:0007166(PANTHER)|GO:0007166(InterPro)
Cam08g1063 694 Pfam Calcium-binding EGF domain 290 327 IPR049883 -
Cam08g1063 694 SMART egf_5 293 335 IPR000742 -
Cam08g1063 694 SMART egf_5 240 289 IPR000742 -
Cam08g1063 694 FunFam Wall-associated receptor kinase 2 492 694 - -
Cam08g1063 694 CDD EGF_CA 290 326 - -
Cam08g1063 694 Gene3D Plasmodium vivax P25 domain 233 342 - -
Cam08g1063 694 SMART egfca_6 290 335 IPR001881 GO:0005509(InterPro)
Cam08g1063 694 Gene3D Transferase(Phosphotransferase) domain 1 492 693 - -
Cam08g1063 694 FunFam Fibrillin 2 285 330 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam08g1061 Cam-Chr8:16969043 Cam08g1063 Cam-Chr8:16995935 2.30E-255 dispersed
Cam08g1063 Cam-Chr8:16995935 Cam11g1931 Cam-Chr11:31700168 4.70E-178 dispersed
Cam08g1063 Cam-Chr8:16995935 Cam08g1065 Cam-Chr8:17024790 1.10E-131 proximal
Cam08g1062 Cam-Chr8:16988897 Cam08g1063 Cam-Chr8:16995935 2.40E-244 tandem
Cam08g1063 Cam-Chr8:16995935 Cam08g1064 Cam-Chr8:17017123 5.20E-121 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85363 PF00069 Pkinase 3.00E-50 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam08g1063 - - - 0.0